Click here to switch to the map view.

The map label for this gene is 220904801

Identifier: 220904801

GI number: 220904801

Start: 1830506

End: 1831177

Strand: Direct

Name: 220904801

Synonym: Ddes_1533

Alternate gene names: NA

Gene position: 1830506-1831177 (Clockwise)

Preceding gene: 220904800

Following gene: 220904802

Centisome position: 63.7

GC content: 53.72

Gene sequence:

>672_bases
ATGCTTATATTAGACTGGATGAAGCCCCATGTAATCACTGTCGTGCCTGACACCTCCCTGCTGCAATGCAGAAAACTCCT
TAAGGACAACCGGATCAACTACCTGCCCGTGGTGGACCGGGATAACATAGTAGTTGGGCTTATAGCCTCTGCTGACCTCA
AGGCTTTTGCCCCACAACACACTACCGGCTTTGAGATTCTTGAAGCCCTGGACATTCTGGCCGAAACAAAGGTCAAGGAT
GTCATGGTGGTCGCCCCTGTTACCATCCATTACAACAATACCGTGGAACAGGCGGCAAAAACCATGTTTGACAGGCACGT
AGCCTGCCTGCCTGTCATTGACGATGAGGACAAGCTGGTCGGCATCATCACGGGCTGGGATATTTTCCACGCTCTGCTCA
ACATGAGCGGAGCGGAACAGGGCGGCGAAGAAGCGGGCTTTGTTCTGCCCAACCAGCCCGGCACCATCCGCGAAATTCTG
GATACCCTCAAAACGCACGGCATGAGCGTCATTTCCGTGCTCTCGGCCGCCGCTGACAACGGCATGCGCCAGGTGAAAAT
CCGCTTTCGTGCCCAGGATGCCGCCGCCCTGGATGACACCTTTGAAATACTCAAACAACATAGCGGCTTGCGCTATTGGG
CAAGAGACGGCAAAGTTCATATGAAAGACTGA

Upstream 100 bases:

>100_bases
GGGTTCAGGCCCGGAACCTGCTGTTCCGGGCCTGAACCGCATACGTCCTGAATGATCTGCCCGGCGGAGAAAAGCCTCAT
CCGCCAAAAGGAAGGATGCC

Downstream 100 bases:

>100_bases
ACCTCCGGCGCATCCATGTGGCACCCCACATGGATGCGCCGGAACCACAACCCAGCCTCTGTGCCGGAACCGGCATATGC
TGCGGAAAATACAATTTACC

Product: CBS domain containing membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MLILDWMKPHVITVVPDTSLLQCRKLLKDNRINYLPVVDRDNIVVGLIASADLKAFAPQHTTGFEILEALDILAETKVKD
VMVVAPVTIHYNNTVEQAAKTMFDRHVACLPVIDDEDKLVGIITGWDIFHALLNMSGAEQGGEEAGFVLPNQPGTIREIL
DTLKTHGMSVISVLSAAADNGMRQVKIRFRAQDAAALDDTFEILKQHSGLRYWARDGKVHMKD

Sequences:

>Translated_223_residues
MLILDWMKPHVITVVPDTSLLQCRKLLKDNRINYLPVVDRDNIVVGLIASADLKAFAPQHTTGFEILEALDILAETKVKD
VMVVAPVTIHYNNTVEQAAKTMFDRHVACLPVIDDEDKLVGIITGWDIFHALLNMSGAEQGGEEAGFVLPNQPGTIREIL
DTLKTHGMSVISVLSAAADNGMRQVKIRFRAQDAAALDDTFEILKQHSGLRYWARDGKVHMKD
>Mature_223_residues
MLILDWMKPHVITVVPDTSLLQCRKLLKDNRINYLPVVDRDNIVVGLIASADLKAFAPQHTTGFEILEALDILAETKVKD
VMVVAPVTIHYNNTVEQAAKTMFDRHVACLPVIDDEDKLVGIITGWDIFHALLNMSGAEQGGEEAGFVLPNQPGTIREIL
DTLKTHGMSVISVLSAAADNGMRQVKIRFRAQDAAALDDTFEILKQHSGLRYWARDGKVHMKD

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 24752; Mature: 24752

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILDWMKPHVITVVPDTSLLQCRKLLKDNRINYLPVVDRDNIVVGLIASADLKAFAPQH
CEEECCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCHHHCCCCC
TTGFEILEALDILAETKVKDVMVVAPVTIHYNNTVEQAAKTMFDRHVACLPVIDDEDKLV
CCHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCHHHHHHHHHHHCCEEEEEEECCCCCEE
GIITGWDIFHALLNMSGAEQGGEEAGFVLPNQPGTIREILDTLKTHGMSVISVLSAAADN
EEEECHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHCC
GMRQVKIRFRAQDAAALDDTFEILKQHSGLRYWARDGKVHMKD
CCEEEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCEEEECC
>Mature Secondary Structure
MLILDWMKPHVITVVPDTSLLQCRKLLKDNRINYLPVVDRDNIVVGLIASADLKAFAPQH
CEEECCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCHHHCCCCC
TTGFEILEALDILAETKVKDVMVVAPVTIHYNNTVEQAAKTMFDRHVACLPVIDDEDKLV
CCHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCHHHHHHHHHHHCCEEEEEEECCCCCEE
GIITGWDIFHALLNMSGAEQGGEEAGFVLPNQPGTIREILDTLKTHGMSVISVLSAAADN
EEEECHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHCC
GMRQVKIRFRAQDAAALDDTFEILKQHSGLRYWARDGKVHMKD
CCEEEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]