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The map label for this gene is frdC [H]

Identifier: 220904798

GI number: 220904798

Start: 1827098

End: 1827727

Strand: Direct

Name: frdC [H]

Synonym: Ddes_1530

Alternate gene names: 220904798

Gene position: 1827098-1827727 (Clockwise)

Preceding gene: 220904797

Following gene: 220904799

Centisome position: 63.59

GC content: 54.13

Gene sequence:

>630_bases
ATGGCTTTAAGCAGAACCCCTGGGGAGGCAAAAACCCGTCTGGACTTCTGGCAGGCAGCCTCCGGCGCGGTGTTGGCCCT
GTTCGTATGTGTACATCTGACACTGGAAGGCACCGTTGTGCTCAGCCCGGCGCTGACAAACGGCATTGCCTGGTTTCTGG
AAGCCACATGGCTGGCCCAGCTTGCCGCACCGCTTATCATCCTGTTGATTGTATTCCACTTCTACATCGCGGCAAGAAAG
ATGCCCTTCCGCGCCAATGAGCTTGGCATCTTTGTACGCCACAGCAAAAGCCTGAAAGATTTTGATACATGGCTATGGCT
TGTTCAGGTATTTACAGCCATTGTCATTCTTCTGGGCGCTTTTTACCACGTGTATACCGTCATGACAGACCTGCCCATCA
ATGTGGCGGGCAGCGCCAAGCGCCTGCACAACGGCTGGCTGGCCTTCTACGTGTTCTTCCTGCCCTGTGTCATCCTTCAT
ACAGGCATTGGCGTATATCGCCTGGCCGTGAAATACGGCATCTGTACCAAGAGTACAAAGCCTGCGTGGCGCAAGTGGAT
ATGGATTGTTATGGGCTGTTATCTTTTGCTTGGAACGCTGGCTCTGACCCGCGTCTGGTTCCTGGGATAG

Upstream 100 bases:

>100_bases
AATTTTTACGAAACGGGGCAGGCTCCGTACAAACGCATATGAAGGAATCACAGTTTTTTCATAATGGCATAGGTACAGAA
TACTTGTATAAGGAGTTGTC

Downstream 100 bases:

>100_bases
GGGGTGCCGTATGCGTATTTTTGAATGTGACGTCTTGTGCATCGGCGCTGGTCTGGCCGGGGAACGTGTGGCGGTTGAAG
CGGCTCAGGCCGGCTTCAGG

Product: fumarate reductase respiratory complex transmembrane subunit

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MALSRTPGEAKTRLDFWQAASGAVLALFVCVHLTLEGTVVLSPALTNGIAWFLEATWLAQLAAPLIILLIVFHFYIAARK
MPFRANELGIFVRHSKSLKDFDTWLWLVQVFTAIVILLGAFYHVYTVMTDLPINVAGSAKRLHNGWLAFYVFFLPCVILH
TGIGVYRLAVKYGICTKSTKPAWRKWIWIVMGCYLLLGTLALTRVWFLG

Sequences:

>Translated_209_residues
MALSRTPGEAKTRLDFWQAASGAVLALFVCVHLTLEGTVVLSPALTNGIAWFLEATWLAQLAAPLIILLIVFHFYIAARK
MPFRANELGIFVRHSKSLKDFDTWLWLVQVFTAIVILLGAFYHVYTVMTDLPINVAGSAKRLHNGWLAFYVFFLPCVILH
TGIGVYRLAVKYGICTKSTKPAWRKWIWIVMGCYLLLGTLALTRVWFLG
>Mature_208_residues
ALSRTPGEAKTRLDFWQAASGAVLALFVCVHLTLEGTVVLSPALTNGIAWFLEATWLAQLAAPLIILLIVFHFYIAARKM
PFRANELGIFVRHSKSLKDFDTWLWLVQVFTAIVILLGAFYHVYTVMTDLPINVAGSAKRLHNGWLAFYVFFLPCVILHT
GIGVYRLAVKYGICTKSTKPAWRKWIWIVMGCYLLLGTLALTRVWFLG

Specific function: Di-heme cytochrome of the fumarate reductase complex [H]

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004224
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 23548; Mature: 23417

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSRTPGEAKTRLDFWQAASGAVLALFVCVHLTLEGTVVLSPALTNGIAWFLEATWLAQ
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHH
LAAPLIILLIVFHFYIAARKMPFRANELGIFVRHSKSLKDFDTWLWLVQVFTAIVILLGA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
FYHVYTVMTDLPINVAGSAKRLHNGWLAFYVFFLPCVILHTGIGVYRLAVKYGICTKSTK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
PAWRKWIWIVMGCYLLLGTLALTRVWFLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALSRTPGEAKTRLDFWQAASGAVLALFVCVHLTLEGTVVLSPALTNGIAWFLEATWLAQ
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHH
LAAPLIILLIVFHFYIAARKMPFRANELGIFVRHSKSLKDFDTWLWLVQVFTAIVILLGA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
FYHVYTVMTDLPINVAGSAKRLHNGWLAFYVFFLPCVILHTGIGVYRLAVKYGICTKSTK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
PAWRKWIWIVMGCYLLLGTLALTRVWFLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]