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The map label for this gene is yfgC [C]

Identifier: 220904716

GI number: 220904716

Start: 1735831

End: 1737240

Strand: Direct

Name: yfgC [C]

Synonym: Ddes_1448

Alternate gene names: 220904716

Gene position: 1735831-1737240 (Clockwise)

Preceding gene: 220904715

Following gene: 220904717

Centisome position: 60.41

GC content: 60.78

Gene sequence:

>1410_bases
ATGCTGCATTATTGCGCCCCGCGCCGCTGGACGGCCCTGCTTGTGTTGCTGGCTTTTCTGCTGCCGCAGATCTGCCCCGC
GCCCGCGCAGGCATTCTTCTTCGGCGGCGTGACCATCAAAGACGAAAAGGAGATGGGAAAAAAATTCGATGTAATGGTGC
GGTCAAACCTGCCTATCATCGAAGACCCGGAGGTAAAGCAGTATGTGGACTATATGCTGGGCAGGCTGGTCAAAACCATT
CCTCCGCAGCCGTTCACCTTTACTGCCAGCACCATACTGCACAACTCCCTTAACGCCTTTGCTGTACCCGGCGGCTATGT
TTACGTGTTCACCGGTCTGATAATGAACCTGGACAAGGAAGAAGAACTGGCCGGCGTGCTGGCCCACGAACTGGCCCACG
TCACCCAGCGCCATGTGGCCTCACGGCTGCAACGCGCCCAGTTCGTCACCCTCGGCTCCCTGCTGCTGGCCGTAGCGGGC
GTGGCGGCGGGTGGCGCGGGCGGCGGAGCCATGGCCGTCGGGGCCATGGGGGCTGGGCAGTCCGCCATGCTGAATTACAG
CCGCATGGATGAAAATGAGGCCGACCATATCGGCCTGCAATATCTTATCGCCGCAGGCTATCCACCGGGCGGCATGGTGG
GCGGCTTCAAGGTACTACGGCAGAAAAGCTGGATGAGCGGCATAAGCGTGCCCACATACCTTTCCACCCACCCCGCTCTG
GGCGACCGCATCAACGGCCTTCAGGCCCGCATCCAGAGCATGCCCAAGGCCGTGCAGAGCCGCAGCCAGGACAACAGACG
CTTTACCCGTGTCAAAGCGCTGCTCTGGGCCAGATATGGCGATGACCAGGCGGCCCTGCAACGCTTTTCAGGCAATGACG
GCCTGTCCAGGATGGGCCGGGGTATTGTGCTCGCCAGGCAGAACCGTATCAACGAGGCCAGCCAGGCCTTTGACCAGGCT
CTCAAGGCAGCCCCCGAGGATCCGCTGGTACTGCGCGAAGCCGGAGCCTTTCACTACCGCAAGGGTGACATGAGCCGGGC
GGACGGCCTGCTTTCCAAAGCCATGCGGCTGGACCCCAATGACTACATGGCCTCCTTTTTCTATGCGCGCATGCTGGATG
AAACGGGCAGGCAGGCGCAGGCCGCCAGCCACTACAAGGACGTGCTGCGCCACGTCCCCGAAGACTCTGAAGTGCATGAG
GCCTATGCACGCTCGCTCGGCAAGGCGGGCAACACGCCCGATGCCTACATCCATATGGCCTACAGCGCCCTGTACTCCAA
CAACAAAAAACTTGCCGAACGGTATTTCAACCAGGCCAAGAGCATGGCCTCCCGCACGACGGACAAGCGCGCTTTTCAGC
GCCTTGAGACCGCCTACAAAGAACGCAAGGAAATATGGGACAAGAACTGA

Upstream 100 bases:

>100_bases
GTCAGGCGCTGCTTGATCTCGGGGTTAGCGTACAAGACACCCCCGAAGGGCAGAACTGGGACCTGGAGTAGGCTCGGCCC
GGGTACCGACGGGAGAACCT

Downstream 100 bases:

>100_bases
TGGAAACACATGCCACTACAATTCTCGCCGTTCGTAAGGACGGTATCGTGGCCCTGGCCGGTGACGGGCAGGTGACCATG
GGGCAGACCATGATCATGAA

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MLHYCAPRRWTALLVLLAFLLPQICPAPAQAFFFGGVTIKDEKEMGKKFDVMVRSNLPIIEDPEVKQYVDYMLGRLVKTI
PPQPFTFTASTILHNSLNAFAVPGGYVYVFTGLIMNLDKEEELAGVLAHELAHVTQRHVASRLQRAQFVTLGSLLLAVAG
VAAGGAGGGAMAVGAMGAGQSAMLNYSRMDENEADHIGLQYLIAAGYPPGGMVGGFKVLRQKSWMSGISVPTYLSTHPAL
GDRINGLQARIQSMPKAVQSRSQDNRRFTRVKALLWARYGDDQAALQRFSGNDGLSRMGRGIVLARQNRINEASQAFDQA
LKAAPEDPLVLREAGAFHYRKGDMSRADGLLSKAMRLDPNDYMASFFYARMLDETGRQAQAASHYKDVLRHVPEDSEVHE
AYARSLGKAGNTPDAYIHMAYSALYSNNKKLAERYFNQAKSMASRTTDKRAFQRLETAYKERKEIWDKN

Sequences:

>Translated_469_residues
MLHYCAPRRWTALLVLLAFLLPQICPAPAQAFFFGGVTIKDEKEMGKKFDVMVRSNLPIIEDPEVKQYVDYMLGRLVKTI
PPQPFTFTASTILHNSLNAFAVPGGYVYVFTGLIMNLDKEEELAGVLAHELAHVTQRHVASRLQRAQFVTLGSLLLAVAG
VAAGGAGGGAMAVGAMGAGQSAMLNYSRMDENEADHIGLQYLIAAGYPPGGMVGGFKVLRQKSWMSGISVPTYLSTHPAL
GDRINGLQARIQSMPKAVQSRSQDNRRFTRVKALLWARYGDDQAALQRFSGNDGLSRMGRGIVLARQNRINEASQAFDQA
LKAAPEDPLVLREAGAFHYRKGDMSRADGLLSKAMRLDPNDYMASFFYARMLDETGRQAQAASHYKDVLRHVPEDSEVHE
AYARSLGKAGNTPDAYIHMAYSALYSNNKKLAERYFNQAKSMASRTTDKRAFQRLETAYKERKEIWDKN
>Mature_469_residues
MLHYCAPRRWTALLVLLAFLLPQICPAPAQAFFFGGVTIKDEKEMGKKFDVMVRSNLPIIEDPEVKQYVDYMLGRLVKTI
PPQPFTFTASTILHNSLNAFAVPGGYVYVFTGLIMNLDKEEELAGVLAHELAHVTQRHVASRLQRAQFVTLGSLLLAVAG
VAAGGAGGGAMAVGAMGAGQSAMLNYSRMDENEADHIGLQYLIAAGYPPGGMVGGFKVLRQKSWMSGISVPTYLSTHPAL
GDRINGLQARIQSMPKAVQSRSQDNRRFTRVKALLWARYGDDQAALQRFSGNDGLSRMGRGIVLARQNRINEASQAFDQA
LKAAPEDPLVLREAGAFHYRKGDMSRADGLLSKAMRLDPNDYMASFFYARMLDETGRQAQAASHYKDVLRHVPEDSEVHE
AYARSLGKAGNTPDAYIHMAYSALYSNNKKLAERYFNQAKSMASRTTDKRAFQRLETAYKERKEIWDKN

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=319, Percent_Identity=32.9153605015674, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI87081800, Length=184, Percent_Identity=29.3478260869565, Blast_Score=62, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322940, Length=173, Percent_Identity=30.0578034682081, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 51924; Mature: 51924

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHYCAPRRWTALLVLLAFLLPQICPAPAQAFFFGGVTIKDEKEMGKKFDVMVRSNLPII
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEECCEEEECHHHHCCCEEEEEECCCCCC
EDPEVKQYVDYMLGRLVKTIPPQPFTFTASTILHNSLNAFAVPGGYVYVFTGLIMNLDKE
CCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCH
EELAGVLAHELAHVTQRHVASRLQRAQFVTLGSLLLAVAGVAAGGAGGGAMAVGAMGAGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCH
SAMLNYSRMDENEADHIGLQYLIAAGYPPGGMVGGFKVLRQKSWMSGISVPTYLSTHPAL
HHHHHHHHCCCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCC
GDRINGLQARIQSMPKAVQSRSQDNRRFTRVKALLWARYGDDQAALQRFSGNDGLSRMGR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCC
GIVLARQNRINEASQAFDQALKAAPEDPLVLREAGAFHYRKGDMSRADGLLSKAMRLDPN
CEEEECHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCH
DYMASFFYARMLDETGRQAQAASHYKDVLRHVPEDSEVHEAYARSLGKAGNTPDAYIHMA
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
YSALYSNNKKLAERYFNQAKSMASRTTDKRAFQRLETAYKERKEIWDKN
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLHYCAPRRWTALLVLLAFLLPQICPAPAQAFFFGGVTIKDEKEMGKKFDVMVRSNLPII
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEECCEEEECHHHHCCCEEEEEECCCCCC
EDPEVKQYVDYMLGRLVKTIPPQPFTFTASTILHNSLNAFAVPGGYVYVFTGLIMNLDKE
CCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCH
EELAGVLAHELAHVTQRHVASRLQRAQFVTLGSLLLAVAGVAAGGAGGGAMAVGAMGAGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCH
SAMLNYSRMDENEADHIGLQYLIAAGYPPGGMVGGFKVLRQKSWMSGISVPTYLSTHPAL
HHHHHHHHCCCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCC
GDRINGLQARIQSMPKAVQSRSQDNRRFTRVKALLWARYGDDQAALQRFSGNDGLSRMGR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCC
GIVLARQNRINEASQAFDQALKAAPEDPLVLREAGAFHYRKGDMSRADGLLSKAMRLDPN
CEEEECHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCH
DYMASFFYARMLDETGRQAQAASHYKDVLRHVPEDSEVHEAYARSLGKAGNTPDAYIHMA
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
YSALYSNNKKLAERYFNQAKSMASRTTDKRAFQRLETAYKERKEIWDKN
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]