Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is yvbK [H]

Identifier: 220904296

GI number: 220904296

Start: 1197683

End: 1198201

Strand: Direct

Name: yvbK [H]

Synonym: Ddes_1023

Alternate gene names: 220904296

Gene position: 1197683-1198201 (Clockwise)

Preceding gene: 220904295

Following gene: 220904300

Centisome position: 41.68

GC content: 51.83

Gene sequence:

>519_bases
ATGAAGATTTCGATTGCAGTGGTCAGTGAAAATAAAAAAGACTTTCTTGATCTTCTGTTACTTGGCGATGAGCAGGAAGA
CATGATCGACCGTTATCTTGAACGGGGCGAGCTTTTTGTCCTCTCTGAGCGGGGCGGGCGGGCCGCCATATGCGTGTGCG
TGGTAACCGACGAAGGCAACGGGCTGTTTGAGATAAAAAACCTGGCTACGGACGCCAGGTATCAGGGGCTGGGGTACGGA
AGCCTGATGGTACGACATGTGTGCGCCCAATATATGGGCAAAGGAACGGACATGCTTGTAGGTACGGGTGAAAGTCCGCG
TACGCTGAATTTTTACAGGCGGTGCGGTTTCAGCTACTCGCACCGCCTGAAAGATTTTTTTATCAACAACTACCGCCATC
CCATTGTGGAGGACGGCGTGGTGTTGACCGACATGATTTACCTTAAAAAGGCGCTCAGATCTTCGCTGTCAAGCTGCTTT
GCCACGGCTTGCCCTATTTTGTGGCGTGTCCGGCGTTGA

Upstream 100 bases:

>100_bases
AGTCAGCCCCCCTTTGCCGCTCCGCGCAGGCGCCAATGGATGCAAGAAACATATGCACGGTGCTGTCCGATATGGGGCCG
CCGTGCCTGCGGAGTCAGGT

Downstream 100 bases:

>100_bases
TGCGGCGGCTATGGCGCAGGCGCAATTCTTCCACAATGACCTTTTCGTAATCCGGAGCTATGGAAAAATCGGCATGAAGT
TCGGCACAGAGCATATTTTC

Product: GCN5-like N-acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKISIAVVSENKKDFLDLLLLGDEQEDMIDRYLERGELFVLSERGGRAAICVCVVTDEGNGLFEIKNLATDARYQGLGYG
SLMVRHVCAQYMGKGTDMLVGTGESPRTLNFYRRCGFSYSHRLKDFFINNYRHPIVEDGVVLTDMIYLKKALRSSLSSCF
ATACPILWRVRR

Sequences:

>Translated_172_residues
MKISIAVVSENKKDFLDLLLLGDEQEDMIDRYLERGELFVLSERGGRAAICVCVVTDEGNGLFEIKNLATDARYQGLGYG
SLMVRHVCAQYMGKGTDMLVGTGESPRTLNFYRRCGFSYSHRLKDFFINNYRHPIVEDGVVLTDMIYLKKALRSSLSSCF
ATACPILWRVRR
>Mature_172_residues
MKISIAVVSENKKDFLDLLLLGDEQEDMIDRYLERGELFVLSERGGRAAICVCVVTDEGNGLFEIKNLATDARYQGLGYG
SLMVRHVCAQYMGKGTDMLVGTGESPRTLNFYRRCGFSYSHRLKDFFINNYRHPIVEDGVVLTDMIYLKKALRSSLSSCF
ATACPILWRVRR

Specific function: Probable N-acetyltransferase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 19522; Mature: 19522

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISIAVVSENKKDFLDLLLLGDEQEDMIDRYLERGELFVLSERGGRAAICVCVVTDEGN
CEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEEECCC
GLFEIKNLATDARYQGLGYGSLMVRHVCAQYMGKGTDMLVGTGESPRTLNFYRRCGFSYS
CEEEEHHHHHCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCHH
HRLKDFFINNYRHPIVEDGVVLTDMIYLKKALRSSLSSCFATACPILWRVRR
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MKISIAVVSENKKDFLDLLLLGDEQEDMIDRYLERGELFVLSERGGRAAICVCVVTDEGN
CEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEEECCC
GLFEIKNLATDARYQGLGYGSLMVRHVCAQYMGKGTDMLVGTGESPRTLNFYRRCGFSYS
CEEEEHHHHHCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCHH
HRLKDFFINNYRHPIVEDGVVLTDMIYLKKALRSSLSSCFATACPILWRVRR
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]