| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is yvbK [H]
Identifier: 220904296
GI number: 220904296
Start: 1197683
End: 1198201
Strand: Direct
Name: yvbK [H]
Synonym: Ddes_1023
Alternate gene names: 220904296
Gene position: 1197683-1198201 (Clockwise)
Preceding gene: 220904295
Following gene: 220904300
Centisome position: 41.68
GC content: 51.83
Gene sequence:
>519_bases ATGAAGATTTCGATTGCAGTGGTCAGTGAAAATAAAAAAGACTTTCTTGATCTTCTGTTACTTGGCGATGAGCAGGAAGA CATGATCGACCGTTATCTTGAACGGGGCGAGCTTTTTGTCCTCTCTGAGCGGGGCGGGCGGGCCGCCATATGCGTGTGCG TGGTAACCGACGAAGGCAACGGGCTGTTTGAGATAAAAAACCTGGCTACGGACGCCAGGTATCAGGGGCTGGGGTACGGA AGCCTGATGGTACGACATGTGTGCGCCCAATATATGGGCAAAGGAACGGACATGCTTGTAGGTACGGGTGAAAGTCCGCG TACGCTGAATTTTTACAGGCGGTGCGGTTTCAGCTACTCGCACCGCCTGAAAGATTTTTTTATCAACAACTACCGCCATC CCATTGTGGAGGACGGCGTGGTGTTGACCGACATGATTTACCTTAAAAAGGCGCTCAGATCTTCGCTGTCAAGCTGCTTT GCCACGGCTTGCCCTATTTTGTGGCGTGTCCGGCGTTGA
Upstream 100 bases:
>100_bases AGTCAGCCCCCCTTTGCCGCTCCGCGCAGGCGCCAATGGATGCAAGAAACATATGCACGGTGCTGTCCGATATGGGGCCG CCGTGCCTGCGGAGTCAGGT
Downstream 100 bases:
>100_bases TGCGGCGGCTATGGCGCAGGCGCAATTCTTCCACAATGACCTTTTCGTAATCCGGAGCTATGGAAAAATCGGCATGAAGT TCGGCACAGAGCATATTTTC
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKISIAVVSENKKDFLDLLLLGDEQEDMIDRYLERGELFVLSERGGRAAICVCVVTDEGNGLFEIKNLATDARYQGLGYG SLMVRHVCAQYMGKGTDMLVGTGESPRTLNFYRRCGFSYSHRLKDFFINNYRHPIVEDGVVLTDMIYLKKALRSSLSSCF ATACPILWRVRR
Sequences:
>Translated_172_residues MKISIAVVSENKKDFLDLLLLGDEQEDMIDRYLERGELFVLSERGGRAAICVCVVTDEGNGLFEIKNLATDARYQGLGYG SLMVRHVCAQYMGKGTDMLVGTGESPRTLNFYRRCGFSYSHRLKDFFINNYRHPIVEDGVVLTDMIYLKKALRSSLSSCF ATACPILWRVRR >Mature_172_residues MKISIAVVSENKKDFLDLLLLGDEQEDMIDRYLERGELFVLSERGGRAAICVCVVTDEGNGLFEIKNLATDARYQGLGYG SLMVRHVCAQYMGKGTDMLVGTGESPRTLNFYRRCGFSYSHRLKDFFINNYRHPIVEDGVVLTDMIYLKKALRSSLSSCF ATACPILWRVRR
Specific function: Probable N-acetyltransferase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 19522; Mature: 19522
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISIAVVSENKKDFLDLLLLGDEQEDMIDRYLERGELFVLSERGGRAAICVCVVTDEGN CEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEEECCC GLFEIKNLATDARYQGLGYGSLMVRHVCAQYMGKGTDMLVGTGESPRTLNFYRRCGFSYS CEEEEHHHHHCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCHH HRLKDFFINNYRHPIVEDGVVLTDMIYLKKALRSSLSSCFATACPILWRVRR HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MKISIAVVSENKKDFLDLLLLGDEQEDMIDRYLERGELFVLSERGGRAAICVCVVTDEGN CEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEEECCC GLFEIKNLATDARYQGLGYGSLMVRHVCAQYMGKGTDMLVGTGESPRTLNFYRRCGFSYS CEEEEHHHHHCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCHH HRLKDFFINNYRHPIVEDGVVLTDMIYLKKALRSSLSSCFATACPILWRVRR HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]