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The map label for this gene is smf [H]

Identifier: 220904239

GI number: 220904239

Start: 1127144

End: 1128472

Strand: Direct

Name: smf [H]

Synonym: Ddes_0966

Alternate gene names: 220904239

Gene position: 1127144-1128472 (Clockwise)

Preceding gene: 220904238

Following gene: 220904240

Centisome position: 39.23

GC content: 64.11

Gene sequence:

>1329_bases
ATGAATCGCGGCACTGTCTGGTCGGAATTGAGCGATGAAGCCCGCACGGAATACTGGGCCGCTCTGGCCCTGCGCCACTG
TGCGGGGCTTGGCGCCAGATCGTGCGCCCGGCTTTTGAAGGCCTTCGGTTCGGCCTATGCCGCCGTGCAGGCGCGTGAGC
GCTGGCGCGAGGCCGGGCTTAATCGGAAACAGGCGGCAGAACTGGCTACGGGTTCGTGGCGCGTGACGGCCCGTGATGAG
TGGGACCGCGCCCGCGATCTTGATGCGGCCATAGTGTTGTGGACCGATTCCGCATATCCGCCTTTGCTGCGCCAGTTGCC
CGATGCTCCGGCGCTTTTGTACTGCCGGGGGGATTTGTCGCTGCTTCAGGCTCCTGCTTTTGCGGTGGTGGGGTCACGGC
GGGCCACGGAGCACGGCAGGGCGGTGGCCGCGCACATGTCTCGCTGTTTGTCGGCCTGCGGTGTGACCATTGTCTCCGGC
ATGGCTCTGGGTATTGACCGGGTGGCGCACGAGGCGGCCCTCAGCCGGATCGGCCGCAGCATAGGCGTTTTGGGCACGGG
TATTGATGTTGTTTATCCATCGGTAAACAGAAAAATTTTTGGCATGATGGAGCAGCAAGGCCTGCTGGTTTCTGAATTCA
TGCCGGGAGCGCGGCCTCTGCCCGAGCATTTTCCCATTCGCAACCGCATTATCAGCGGTTTTGCTTTGGGGGTGCTGGTG
GTCGAGGCCGCAAGCCGCTCCGGCAGCCTGATTACCGCTCGTCTGGCGTTGGAGCAGAACCGCGAGGTGTACGCGGTTCC
CGGCCCGGCCCTGGATGCAAGCTGCCTTGGCTGCCAGGAACTTGTGCGTCAGGGGGCGCGGCCTGTTTTCAGCGCGGAGG
ACGTGTTGCGCGATCTGGCGGAACAGCTGCGTCCCTATGGCATCAGCCGCGACAGTCTTGGTGACGAAGAAAAAATTGGC
CCGGAACTGGCGCTCATACCGGAAGCGGCAAAAGAAGAACCGGCCGAAAGCGGATATGCCGGGCGTGCAGCCCCGGCGCG
CTCGGGGAAACAGCAAGAGAAGCAGTCTGCCCTCCCGGCTGTGGCCCGGCAGCATAAACCCCTGGGCGCCGCGGAAAACC
TCGCCCCGGCCGGGCGCAGGGCGGCCCTGCTGGACTGTTTGCGCCAACGCGGCCCCATGCAGGCGGATGATCTTGCCTGC
GCGCTGGACATCAGCGTGGCCGATCTCAACGTCATGCTTGTAGGGCTTGAAATGCTCGGCCAGGTGTGTCGTCTGCCGGG
GGCCAGATATGCATCGGGGCAGGATTCCGGGAACGGGGCAGAAGCATGA

Upstream 100 bases:

>100_bases
GACAAGGAAGCGGCGGGGCAGGCCTACAGCCAGTTGCTGGCGCGTTTTCCCAAATCCGAGGCCGCCCGCCTGGCGCGGAC
GCGCGGCCTGGCCCGCTAGC

Downstream 100 bases:

>100_bases
GCGAAAAAAAACTGAAAAAAAATACTGCCGCTGCGCATGCCGAAGCAGATTCCCTTGGCGCGCATTCCGGCGGCAAGGCC
TTGTCCGCAGCGGGCAAGCA

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MNRGTVWSELSDEARTEYWAALALRHCAGLGARSCARLLKAFGSAYAAVQARERWREAGLNRKQAAELATGSWRVTARDE
WDRARDLDAAIVLWTDSAYPPLLRQLPDAPALLYCRGDLSLLQAPAFAVVGSRRATEHGRAVAAHMSRCLSACGVTIVSG
MALGIDRVAHEAALSRIGRSIGVLGTGIDVVYPSVNRKIFGMMEQQGLLVSEFMPGARPLPEHFPIRNRIISGFALGVLV
VEAASRSGSLITARLALEQNREVYAVPGPALDASCLGCQELVRQGARPVFSAEDVLRDLAEQLRPYGISRDSLGDEEKIG
PELALIPEAAKEEPAESGYAGRAAPARSGKQQEKQSALPAVARQHKPLGAAENLAPAGRRAALLDCLRQRGPMQADDLAC
ALDISVADLNVMLVGLEMLGQVCRLPGARYASGQDSGNGAEA

Sequences:

>Translated_442_residues
MNRGTVWSELSDEARTEYWAALALRHCAGLGARSCARLLKAFGSAYAAVQARERWREAGLNRKQAAELATGSWRVTARDE
WDRARDLDAAIVLWTDSAYPPLLRQLPDAPALLYCRGDLSLLQAPAFAVVGSRRATEHGRAVAAHMSRCLSACGVTIVSG
MALGIDRVAHEAALSRIGRSIGVLGTGIDVVYPSVNRKIFGMMEQQGLLVSEFMPGARPLPEHFPIRNRIISGFALGVLV
VEAASRSGSLITARLALEQNREVYAVPGPALDASCLGCQELVRQGARPVFSAEDVLRDLAEQLRPYGISRDSLGDEEKIG
PELALIPEAAKEEPAESGYAGRAAPARSGKQQEKQSALPAVARQHKPLGAAENLAPAGRRAALLDCLRQRGPMQADDLAC
ALDISVADLNVMLVGLEMLGQVCRLPGARYASGQDSGNGAEA
>Mature_442_residues
MNRGTVWSELSDEARTEYWAALALRHCAGLGARSCARLLKAFGSAYAAVQARERWREAGLNRKQAAELATGSWRVTARDE
WDRARDLDAAIVLWTDSAYPPLLRQLPDAPALLYCRGDLSLLQAPAFAVVGSRRATEHGRAVAAHMSRCLSACGVTIVSG
MALGIDRVAHEAALSRIGRSIGVLGTGIDVVYPSVNRKIFGMMEQQGLLVSEFMPGARPLPEHFPIRNRIISGFALGVLV
VEAASRSGSLITARLALEQNREVYAVPGPALDASCLGCQELVRQGARPVFSAEDVLRDLAEQLRPYGISRDSLGDEEKIG
PELALIPEAAKEEPAESGYAGRAAPARSGKQQEKQSALPAVARQHKPLGAAENLAPAGRRAALLDCLRQRGPMQADDLAC
ALDISVADLNVMLVGLEMLGQVCRLPGARYASGQDSGNGAEA

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=202, Percent_Identity=48.019801980198, Blast_Score=163, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 47217; Mature: 47217

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRGTVWSELSDEARTEYWAALALRHCAGLGARSCARLLKAFGSAYAAVQARERWREAGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NRKQAAELATGSWRVTARDEWDRARDLDAAIVLWTDSAYPPLLRQLPDAPALLYCRGDLS
CHHHHHHHCCCCEEEEECCHHHHHHCCCEEEEEEECCCCCHHHHHCCCCCEEEEECCCHH
LLQAPAFAVVGSRRATEHGRAVAAHMSRCLSACGVTIVSGMALGIDRVAHEAALSRIGRS
HHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGVLGTGIDVVYPSVNRKIFGMMEQQGLLVSEFMPGARPLPEHFPIRNRIISGFALGVLV
HHHEECCHHEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
VEAASRSGSLITARLALEQNREVYAVPGPALDASCLGCQELVRQGARPVFSAEDVLRDLA
HHHHCCCCCEEEEEEEHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
EQLRPYGISRDSLGDEEKIGPELALIPEAAKEEPAESGYAGRAAPARSGKQQEKQSALPA
HHHCCCCCCCCCCCCHHHCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
VARQHKPLGAAENLAPAGRRAALLDCLRQRGPMQADDLACALDISVADLNVMLVGLEMLG
HHHHCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCHHCCEEEEEEEHHHHHHHHHHHHHHH
QVCRLPGARYASGQDSGNGAEA
HHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRGTVWSELSDEARTEYWAALALRHCAGLGARSCARLLKAFGSAYAAVQARERWREAGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NRKQAAELATGSWRVTARDEWDRARDLDAAIVLWTDSAYPPLLRQLPDAPALLYCRGDLS
CHHHHHHHCCCCEEEEECCHHHHHHCCCEEEEEEECCCCCHHHHHCCCCCEEEEECCCHH
LLQAPAFAVVGSRRATEHGRAVAAHMSRCLSACGVTIVSGMALGIDRVAHEAALSRIGRS
HHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGVLGTGIDVVYPSVNRKIFGMMEQQGLLVSEFMPGARPLPEHFPIRNRIISGFALGVLV
HHHEECCHHEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
VEAASRSGSLITARLALEQNREVYAVPGPALDASCLGCQELVRQGARPVFSAEDVLRDLA
HHHHCCCCCEEEEEEEHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
EQLRPYGISRDSLGDEEKIGPELALIPEAAKEEPAESGYAGRAAPARSGKQQEKQSALPA
HHHCCCCCCCCCCCCHHHCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
VARQHKPLGAAENLAPAGRRAALLDCLRQRGPMQADDLACALDISVADLNVMLVGLEMLG
HHHHCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCHHCCEEEEEEEHHHHHHHHHHHHHHH
QVCRLPGARYASGQDSGNGAEA
HHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]