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The map label for this gene is ngr [H]

Identifier: 220904170

GI number: 220904170

Start: 1046325

End: 1046828

Strand: Reverse

Name: ngr [H]

Synonym: Ddes_0897

Alternate gene names: 220904170

Gene position: 1046828-1046325 (Counterclockwise)

Preceding gene: 220904173

Following gene: 220904169

Centisome position: 36.43

GC content: 57.34

Gene sequence:

>504_bases
ATGGACAAGACTCAGGAAAATCTCATGACGGCCTTTGCCGGTGAATCCCAGGCCAACCGTAAATACCTTGCCTTCGCCCA
GGTGGCCGACAAGGAAGGCCTGACCCAGGTGGCCAAGCTTTTCCGCGCCACTGCCGCCGCCGAAACCATCCACGCCCACG
CTCACCTGCGTAATGCCGGCAAGATCGGCGACACCACGGCTAACCTCAAGTCCGCCATTGAAGGTGAAACCTACGAGTTC
ACCAAGATGTACCCCGAGATGATCAAGGACGCCGAAGCCGAAGGCAAGACTGCCATTGCCAAGTACTTCGACTTTGTGAA
CAGCGTGGAAGAAGTGCACGCCAACCTGTACAAAAAGGCTCTGGAAAATCCCGGCGGCCTGCCCGAAACCGATTACTACA
TCTGTAAGGTCTGCGGCTACACACACGAAGGCCCCTGTGACGACTGCCCCGTGTGCGGCGCCGGTACGGCTGCATTTTTC
AATGCCAGCGAGTGCTGCAAGTAA

Upstream 100 bases:

>100_bases
GAGTGACCGGAAAAAAAGCTTTACAATAAGCGTGAGATTGTTTAAATAGGAATTGTTATTGATAATAAAAAGCAGCAGCT
TTACATAAAAGGAGTAAAAA

Downstream 100 bases:

>100_bases
GGCTGTTTCCGGCGGCCTGCCCGGTTGCCCGAAATGCCAGACCTGCTGACCGCATGGCGCTGGATGGATGATGGTTGGAG
GAGCCTTTCGGCTCGGGGGC

Product: Rubrerythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MDKTQENLMTAFAGESQANRKYLAFAQVADKEGLTQVAKLFRATAAAETIHAHAHLRNAGKIGDTTANLKSAIEGETYEF
TKMYPEMIKDAEAEGKTAIAKYFDFVNSVEEVHANLYKKALENPGGLPETDYYICKVCGYTHEGPCDDCPVCGAGTAAFF
NASECCK

Sequences:

>Translated_167_residues
MDKTQENLMTAFAGESQANRKYLAFAQVADKEGLTQVAKLFRATAAAETIHAHAHLRNAGKIGDTTANLKSAIEGETYEF
TKMYPEMIKDAEAEGKTAIAKYFDFVNSVEEVHANLYKKALENPGGLPETDYYICKVCGYTHEGPCDDCPVCGAGTAAFF
NASECCK
>Mature_167_residues
MDKTQENLMTAFAGESQANRKYLAFAQVADKEGLTQVAKLFRATAAAETIHAHAHLRNAGKIGDTTANLKSAIEGETYEF
TKMYPEMIKDAEAEGKTAIAKYFDFVNSVEEVHANLYKKALENPGGLPETDYYICKVCGYTHEGPCDDCPVCGAGTAAFF
NASECCK

Specific function: Exhibits NADH peroxidase activity (in vitro) [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 18181; Mature: 18181

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKTQENLMTAFAGESQANRKYLAFAQVADKEGLTQVAKLFRATAAAETIHAHAHLRNAG
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIGDTTANLKSAIEGETYEFTKMYPEMIKDAEAEGKTAIAKYFDFVNSVEEVHANLYKKA
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LENPGGLPETDYYICKVCGYTHEGPCDDCPVCGAGTAAFFNASECCK
HCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHCC
>Mature Secondary Structure
MDKTQENLMTAFAGESQANRKYLAFAQVADKEGLTQVAKLFRATAAAETIHAHAHLRNAG
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIGDTTANLKSAIEGETYEFTKMYPEMIKDAEAEGKTAIAKYFDFVNSVEEVHANLYKKA
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LENPGGLPETDYYICKVCGYTHEGPCDDCPVCGAGTAAFFNASECCK
HCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9226272; 8383040 [H]