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The map label for this gene is yibQ [C]

Identifier: 220904168

GI number: 220904168

Start: 1042956

End: 1044428

Strand: Reverse

Name: yibQ [C]

Synonym: Ddes_0895

Alternate gene names: 220904168

Gene position: 1044428-1042956 (Counterclockwise)

Preceding gene: 220904169

Following gene: 220904167

Centisome position: 36.35

GC content: 64.56

Gene sequence:

>1473_bases
ATGTCTGATAAAAAACATACTACAAGCCTCCTGCCCGGCCGCTCATGGCTGGTCGGGAGGCTTTCCGCTTCATGGCGCGT
GGCCCTGGGCGGCAGTCTCTGGCTGCTGGGTTGCCTTGCCCTGGCGCTCTGGCTGAACCGTGGGGAAGAGGCCCCTTTCA
GGACTGGCGGCAGCGACGCACCCGCGCAGGCTGAATACGGGCATGCCCGCGCTCTGGAATCCGCAGCGGGCGACAGCTCC
CAGCCCTTCCATACACGCCTGACGGCGCTGGATATGGCGGTAGAAGAAGCCATGTCAGCTGCGCTGCCCAAGGCGCACTG
GCGGCGCGAAATTCTCCCCGCGGCCTCCCATGCGGGCGACCGGGCCAACGGACCTGAAAGCCTGCCGGAAATTTCCGGCA
GGCGCGCCTACACAATTACCGGTCCTTGCGCCCCCCTGCGCCTGGGACTGGCCCTGCTGGGCAGGTTTGCGGCACATACT
GACGTTTTTTCCCCTCATGCAGGGGGCGCCGGACTTACGGCGCAGGCAGCGCCGCATGCAGACGCCGCCTCCTCCGGAAC
AGAAAAGGCAGGAGCAGGCAGGGCCGCGTCGGACGCTTCTTTCCTGCGCGACGGGAACATCCGCCTGTGCTGGACCAGCG
ACGGGCAACTGGAAATACGCGACCACGGCCGCCTGACGCACCGCATTCTTTTTCCCGGTCGCGAAGGCGAACTTGCAGGG
CTGGATATTCCCCTGCCTCGCCCGGCCCTGGCGCTGGTCATTGACGACATGGGACAAAGCCTCGAAGCTGCGGGCGCGCT
TGCCGCCCTGCCCTATGCCGTTACGCCCGCCATATGGCCACACGCGCCACACGCCACGAGCACAGCGGAACTGGCGGCGC
AAAGGCGTATGGATGTACTCGTCCATGTGCCGATGGAGGCCCTGCCCCGAAAGGACGGAACCATTCCCAACCCCGGGCAG
GGGGCACTGAAGGTCGGCATGGAGCCGCACCGCATACAGGCCATCCTTGAAGCAAACCTGGCGAGCCTGCCTACTGCCGT
GGGCATGAACAACCACATGGGTTCCGCCTTTACAGGCGATGCGGCCGCCTGCCGCATTGTATGCGCCCGCCTCGCGGGTA
CAGGTTTTTTTCTGCTGGACAGTCTCACAACCCCCGGTTCGCTGCTGGCGCAGCAGGCCCGCGCCCTGGGACTGGTGAGC
GCCAGCCGTGATGTTTTTCTTGATACATACCGCCAGACGCCAGCTATTCTCAAAGCTCTGGATCAGGCAGCAGTCAGGGC
GCGTATCCGGGGATACGCCATTGCCATCGGCCATCCTTATGCCGAAACCCTGAGTGCCCTGCGGGCCTGGCAAAACAGTG
AAGGCGTGGCGCTTGTCCCCTTGCGCCGCCTCATATGGAACATGGCTCTGGAACAAGCCGGAACAGCCACAAACACGGCT
GCGGACAGCGCGTTGCAGATGCCCGTGCGCTAA

Upstream 100 bases:

>100_bases
GGGACAATCAGTTGCGCATGGGGCTGCAGATGGTCAAAAGCCTGCCCAAGATGAGTGAAATCAAGGCTCAGTAACGCCCT
GAAACACAATCCAGTGGCGC

Downstream 100 bases:

>100_bases
AAGCGCTGCGGGCTGCCGCTTTCGGCACACGCTGGGCCTGCTGTGGCTGTTCCCGGGGCGCGGCCCGCCCGGCTTCTGAA
AAATTTGCCTGGCGGATATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MSDKKHTTSLLPGRSWLVGRLSASWRVALGGSLWLLGCLALALWLNRGEEAPFRTGGSDAPAQAEYGHARALESAAGDSS
QPFHTRLTALDMAVEEAMSAALPKAHWRREILPAASHAGDRANGPESLPEISGRRAYTITGPCAPLRLGLALLGRFAAHT
DVFSPHAGGAGLTAQAAPHADAASSGTEKAGAGRAASDASFLRDGNIRLCWTSDGQLEIRDHGRLTHRILFPGREGELAG
LDIPLPRPALALVIDDMGQSLEAAGALAALPYAVTPAIWPHAPHATSTAELAAQRRMDVLVHVPMEALPRKDGTIPNPGQ
GALKVGMEPHRIQAILEANLASLPTAVGMNNHMGSAFTGDAAACRIVCARLAGTGFFLLDSLTTPGSLLAQQARALGLVS
ASRDVFLDTYRQTPAILKALDQAAVRARIRGYAIAIGHPYAETLSALRAWQNSEGVALVPLRRLIWNMALEQAGTATNTA
ADSALQMPVR

Sequences:

>Translated_490_residues
MSDKKHTTSLLPGRSWLVGRLSASWRVALGGSLWLLGCLALALWLNRGEEAPFRTGGSDAPAQAEYGHARALESAAGDSS
QPFHTRLTALDMAVEEAMSAALPKAHWRREILPAASHAGDRANGPESLPEISGRRAYTITGPCAPLRLGLALLGRFAAHT
DVFSPHAGGAGLTAQAAPHADAASSGTEKAGAGRAASDASFLRDGNIRLCWTSDGQLEIRDHGRLTHRILFPGREGELAG
LDIPLPRPALALVIDDMGQSLEAAGALAALPYAVTPAIWPHAPHATSTAELAAQRRMDVLVHVPMEALPRKDGTIPNPGQ
GALKVGMEPHRIQAILEANLASLPTAVGMNNHMGSAFTGDAAACRIVCARLAGTGFFLLDSLTTPGSLLAQQARALGLVS
ASRDVFLDTYRQTPAILKALDQAAVRARIRGYAIAIGHPYAETLSALRAWQNSEGVALVPLRRLIWNMALEQAGTATNTA
ADSALQMPVR
>Mature_489_residues
SDKKHTTSLLPGRSWLVGRLSASWRVALGGSLWLLGCLALALWLNRGEEAPFRTGGSDAPAQAEYGHARALESAAGDSSQ
PFHTRLTALDMAVEEAMSAALPKAHWRREILPAASHAGDRANGPESLPEISGRRAYTITGPCAPLRLGLALLGRFAAHTD
VFSPHAGGAGLTAQAAPHADAASSGTEKAGAGRAASDASFLRDGNIRLCWTSDGQLEIRDHGRLTHRILFPGREGELAGL
DIPLPRPALALVIDDMGQSLEAAGALAALPYAVTPAIWPHAPHATSTAELAAQRRMDVLVHVPMEALPRKDGTIPNPGQG
ALKVGMEPHRIQAILEANLASLPTAVGMNNHMGSAFTGDAAACRIVCARLAGTGFFLLDSLTTPGSLLAQQARALGLVSA
SRDVFLDTYRQTPAILKALDQAAVRARIRGYAIAIGHPYAETLSALRAWQNSEGVALVPLRRLIWNMALEQAGTATNTAA
DSALQMPVR

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yibQ [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=199, Percent_Identity=32.1608040201005, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 51536; Mature: 51405

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKKHTTSLLPGRSWLVGRLSASWRVALGGSLWLLGCLALALWLNRGEEAPFRTGGSDA
CCCCCCCHHCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PAQAEYGHARALESAAGDSSQPFHTRLTALDMAVEEAMSAALPKAHWRREILPAASHAGD
CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCCC
RANGPESLPEISGRRAYTITGPCAPLRLGLALLGRFAAHTDVFSPHAGGAGLTAQAAPHA
CCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DAASSGTEKAGAGRAASDASFLRDGNIRLCWTSDGQLEIRDHGRLTHRILFPGREGELAG
CCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCEEEECCCCCEEEEEEECCCCCCCCC
LDIPLPRPALALVIDDMGQSLEAAGALAALPYAVTPAIWPHAPHATSTAELAAQRRMDVL
CCCCCCCCHHHHEEHHHCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHCCCEE
VHVPMEALPRKDGTIPNPGQGALKVGMEPHRIQAILEANLASLPTAVGMNNHMGSAFTGD
EECCHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCC
AAACRIVCARLAGTGFFLLDSLTTPGSLLAQQARALGLVSASRDVFLDTYRQTPAILKAL
HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
DQAAVRARIRGYAIAIGHPYAETLSALRAWQNSEGVALVPLRRLIWNMALEQAGTATNTA
HHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCHH
ADSALQMPVR
CCHHHCCCCC
>Mature Secondary Structure 
SDKKHTTSLLPGRSWLVGRLSASWRVALGGSLWLLGCLALALWLNRGEEAPFRTGGSDA
CCCCCCHHCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PAQAEYGHARALESAAGDSSQPFHTRLTALDMAVEEAMSAALPKAHWRREILPAASHAGD
CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCCC
RANGPESLPEISGRRAYTITGPCAPLRLGLALLGRFAAHTDVFSPHAGGAGLTAQAAPHA
CCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DAASSGTEKAGAGRAASDASFLRDGNIRLCWTSDGQLEIRDHGRLTHRILFPGREGELAG
CCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCEEEECCCCCEEEEEEECCCCCCCCC
LDIPLPRPALALVIDDMGQSLEAAGALAALPYAVTPAIWPHAPHATSTAELAAQRRMDVL
CCCCCCCCHHHHEEHHHCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHCCCEE
VHVPMEALPRKDGTIPNPGQGALKVGMEPHRIQAILEANLASLPTAVGMNNHMGSAFTGD
EECCHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCC
AAACRIVCARLAGTGFFLLDSLTTPGSLLAQQARALGLVSASRDVFLDTYRQTPAILKAL
HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
DQAAVRARIRGYAIAIGHPYAETLSALRAWQNSEGVALVPLRRLIWNMALEQAGTATNTA
HHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCHH
ADSALQMPVR
CCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]