| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904141
Identifier: 220904141
GI number: 220904141
Start: 1017930
End: 1018658
Strand: Direct
Name: 220904141
Synonym: Ddes_0868
Alternate gene names: NA
Gene position: 1017930-1018658 (Clockwise)
Preceding gene: 220904140
Following gene: 220904142
Centisome position: 35.43
GC content: 54.6
Gene sequence:
>729_bases ATGATGCGGCTTGTCCGCATTATGGAGTTCAAGATCATGCCTGCCTTTGCAGAAATATACGAACGTATCAAACTGGCGAC AAACAGCCGCACTCAGGTGGAATTGGCCGAGGTGCTGGATATACGCCAGTCGAGCATCTCAGATGCCAAGCGCCGCAATT CCGTTCCCGGCGACTGGTTTATGAAGCTGTTTGAGAAGTTCGGGCTTAATCCCGACTGGCTCAAGCAGGGCATAGGGCCC ATGTACCTGCGTACCGAGCAGGGGTACATGCCGCAGGATGCGCCTGCGGCGCTTGCGGAAAACGCCGCCCACTACGGCGA TACTCTTGCAAGGGGATCTGTGGTTTCTGTTTATCACATGAATTGCGATTATGATGACGAGCAGCCACGCCCGTCCCTTG AAGTGGCGGGAAAAATTTCCCTGCCGCATTCTTATATGAAAGACAGCCTTGCTGTCCTGCGCATGCGTGGAACCAACATG ACCCCCACTATTATGTCCGACGCACACCTTGGTGTGGACACTATGGACAGGGACGTGATTTCCGGCCGCGTGTATGCACT TTTTGCGCCCAACGAAGGCGTGATTCTTCGTCGTCTGTTCCTGAACAGCGCGCAGGACGGGTATGTGCTGCGTTCTGATT CTGCGAACTTCCCCGAAACAACACTCACACCCGACCTGCTGACCAGACGTTTGCTGGGCCGGGTGGTGTGGGTATTTCAG GACTTATAA
Upstream 100 bases:
>100_bases ATGCGTACCAACGCTGGCTGGAGGCCATGCGCAAATCTCTCAAGGAGAACAGCAAGATGGTGCTGGCCAACGAAGCGCCT CTTCTTAATCCTCAACATTG
Downstream 100 bases:
>100_bases ACATGACCATAACGCTGGCCGGAAAAGCTTCTTTAGCCACGTTCAGAACGGTCAGCCTGATATGCTGTCTGGTCTGCGGC ATGCTCGTGGCCGCCTGCGG
Product: putative phage repressor
Products: NA
Alternate protein names: CI Repressor; Transcriptional Regulator
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MMRLVRIMEFKIMPAFAEIYERIKLATNSRTQVELAEVLDIRQSSISDAKRRNSVPGDWFMKLFEKFGLNPDWLKQGIGP MYLRTEQGYMPQDAPAALAENAAHYGDTLARGSVVSVYHMNCDYDDEQPRPSLEVAGKISLPHSYMKDSLAVLRMRGTNM TPTIMSDAHLGVDTMDRDVISGRVYALFAPNEGVILRRLFLNSAQDGYVLRSDSANFPETTLTPDLLTRRLLGRVVWVFQ DL
Sequences:
>Translated_242_residues MMRLVRIMEFKIMPAFAEIYERIKLATNSRTQVELAEVLDIRQSSISDAKRRNSVPGDWFMKLFEKFGLNPDWLKQGIGP MYLRTEQGYMPQDAPAALAENAAHYGDTLARGSVVSVYHMNCDYDDEQPRPSLEVAGKISLPHSYMKDSLAVLRMRGTNM TPTIMSDAHLGVDTMDRDVISGRVYALFAPNEGVILRRLFLNSAQDGYVLRSDSANFPETTLTPDLLTRRLLGRVVWVFQ DL >Mature_242_residues MMRLVRIMEFKIMPAFAEIYERIKLATNSRTQVELAEVLDIRQSSISDAKRRNSVPGDWFMKLFEKFGLNPDWLKQGIGP MYLRTEQGYMPQDAPAALAENAAHYGDTLARGSVVSVYHMNCDYDDEQPRPSLEVAGKISLPHSYMKDSLAVLRMRGTNM TPTIMSDAHLGVDTMDRDVISGRVYALFAPNEGVILRRLFLNSAQDGYVLRSDSANFPETTLTPDLLTRRLLGRVVWVFQ DL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27440; Mature: 27440
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRLVRIMEFKIMPAFAEIYERIKLATNSRTQVELAEVLDIRQSSISDAKRRNSVPGDWF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH MKLFEKFGLNPDWLKQGIGPMYLRTEQGYMPQDAPAALAENAAHYGDTLARGSVVSVYHM HHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCHHHHCCCEEEEEEE NCDYDDEQPRPSLEVAGKISLPHSYMKDSLAVLRMRGTNMTPTIMSDAHLGVDTMDRDVI CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCCCCCCCEECCCCCCCCHHHHHHH SGRVYALFAPNEGVILRRLFLNSAQDGYVLRSDSANFPETTLTPDLLTRRLLGRVVWVFQ CCEEEEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH DL CC >Mature Secondary Structure MMRLVRIMEFKIMPAFAEIYERIKLATNSRTQVELAEVLDIRQSSISDAKRRNSVPGDWF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH MKLFEKFGLNPDWLKQGIGPMYLRTEQGYMPQDAPAALAENAAHYGDTLARGSVVSVYHM HHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCHHHHCCCEEEEEEE NCDYDDEQPRPSLEVAGKISLPHSYMKDSLAVLRMRGTNMTPTIMSDAHLGVDTMDRDVI CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCCCCCCCEECCCCCCCCHHHHHHH SGRVYALFAPNEGVILRRLFLNSAQDGYVLRSDSANFPETTLTPDLLTRRLLGRVVWVFQ CCEEEEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH DL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA