| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is hflK [H]
Identifier: 220904139
GI number: 220904139
Start: 1015919
End: 1017082
Strand: Direct
Name: hflK [H]
Synonym: Ddes_0866
Alternate gene names: 220904139
Gene position: 1015919-1017082 (Clockwise)
Preceding gene: 220904138
Following gene: 220904140
Centisome position: 35.36
GC content: 58.76
Gene sequence:
>1164_bases ATGAATTGGGATTGGGACAAGCTACAGGAAAAGAGGCAACGGCAGCAGGGGGCCAATCCTCCCCCCAAGCCGCCCCGCAA CACTGAGCCTGACAACGATGAAGGGCAGGACCGGCAGCCCCCACGGGCGCGGCGTACTCCTTTTAACGGTCGGGGCAGAG GGGATGACAATCCCTTGAAAAAACTGTCGCAGATGAACCTTCCCAATGGAAAGGCCTTTTTTCTGATCGGTCTGGCGGTG GTGGGGCTGTGGCTTCTTTCGGGTATTTACATCATTAATCCCGACGAGCAGGGCGTGGTGCTGCGCTTCGGCAAGTATAA CCGCACCGAAGGTCCCGGTCCTCATTACGCATGGCCTGCCCCCATAGAAAGCGTGTACAAACCGCAGGTTACCCAGGTGC TGCGCAGTGAGGTGGGTTTTCGCTCCGTGGGGCAGAGCACCACATTTCAGCAGGGGCAGGTGCGCACGGTCTCTGAAGAA GCGTCCATGCTCACCGGCGATGAAAATATCGTCAATGTGCAGTTCAGTGTACAGTACAAGATCGGTGATCCGGTACAGTA TCTGTTTAACGTGAGCGCGCCCACGGCTCTTGTGCGCAATGCCGCCGAGGCCGCCATGCGCGAGGTCATCGGCAATAGCC AGATCGACTCGGCCATCACTGACGGCAAGCTGAAAATCCAGAGCGAGGCCACACAGCTTCTGCAGACCATTCTGGACCGC TACGGTGCGGGCATCCAGGTGCTGGCCGTACAGTTGCAGGACGTGCACCCCCCGCAGGAAGTCATTGATGCCTTCAAGGA CGTTGCCAGCGCCAGAGAAGACAAGAGCCGCATCATCAACGAGGCCGAAGCCTACCGCAACGAACTGCTGCCCAAGGCAC GAGGCCAGGCGGCGGCCATGCTCAACGAGGCAGAATCGTATCATGCTGTGCGCGTGCGCACAGCCGAGGGTGAAACCTCC CGTTTTGACGCCCTGAGCGCGGAACACCGCAAGGCCCCCAAGGTCACCGAGCAGCGCCTTTACTATGAAACTATGGAAGA TATTCTTGCCGGTGCTGATGAAAAAGTGCTTATGGATGCCCCGGCGGCATCCCGTGCCTTGCCTTATCTGAATCTGCCCA GCCTGGGCGCCCCTGTTGCCCCCAAGGCGTTGGAGAGAAAATAA
Upstream 100 bases:
>100_bases CCCTATTTTTATCTCTTCACACATATTAAAATCGCAAACATTTTTCAGTCATGATCGGCTGAAATCATGTCGCGAATCAA AAAAAAGGTAAACCTCCGTC
Downstream 100 bases:
>100_bases TGCGTACCAATCCTCTGCCGGCTGTCATCGTGCTGCTGCTGATCGTTGTGGTGGGTAGCCAGTGCTTTTTTACTGTCCAT CAGACGCAAACGGCTCTTGT
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MNWDWDKLQEKRQRQQGANPPPKPPRNTEPDNDEGQDRQPPRARRTPFNGRGRGDDNPLKKLSQMNLPNGKAFFLIGLAV VGLWLLSGIYIINPDEQGVVLRFGKYNRTEGPGPHYAWPAPIESVYKPQVTQVLRSEVGFRSVGQSTTFQQGQVRTVSEE ASMLTGDENIVNVQFSVQYKIGDPVQYLFNVSAPTALVRNAAEAAMREVIGNSQIDSAITDGKLKIQSEATQLLQTILDR YGAGIQVLAVQLQDVHPPQEVIDAFKDVASAREDKSRIINEAEAYRNELLPKARGQAAAMLNEAESYHAVRVRTAEGETS RFDALSAEHRKAPKVTEQRLYYETMEDILAGADEKVLMDAPAASRALPYLNLPSLGAPVAPKALERK
Sequences:
>Translated_387_residues MNWDWDKLQEKRQRQQGANPPPKPPRNTEPDNDEGQDRQPPRARRTPFNGRGRGDDNPLKKLSQMNLPNGKAFFLIGLAV VGLWLLSGIYIINPDEQGVVLRFGKYNRTEGPGPHYAWPAPIESVYKPQVTQVLRSEVGFRSVGQSTTFQQGQVRTVSEE ASMLTGDENIVNVQFSVQYKIGDPVQYLFNVSAPTALVRNAAEAAMREVIGNSQIDSAITDGKLKIQSEATQLLQTILDR YGAGIQVLAVQLQDVHPPQEVIDAFKDVASAREDKSRIINEAEAYRNELLPKARGQAAAMLNEAESYHAVRVRTAEGETS RFDALSAEHRKAPKVTEQRLYYETMEDILAGADEKVLMDAPAASRALPYLNLPSLGAPVAPKALERK >Mature_387_residues MNWDWDKLQEKRQRQQGANPPPKPPRNTEPDNDEGQDRQPPRARRTPFNGRGRGDDNPLKKLSQMNLPNGKAFFLIGLAV VGLWLLSGIYIINPDEQGVVLRFGKYNRTEGPGPHYAWPAPIESVYKPQVTQVLRSEVGFRSVGQSTTFQQGQVRTVSEE ASMLTGDENIVNVQFSVQYKIGDPVQYLFNVSAPTALVRNAAEAAMREVIGNSQIDSAITDGKLKIQSEATQLLQTILDR YGAGIQVLAVQLQDVHPPQEVIDAFKDVASAREDKSRIINEAEAYRNELLPKARGQAAAMLNEAESYHAVRVRTAEGETS RFDALSAEHRKAPKVTEQRLYYETMEDILAGADEKVLMDAPAASRALPYLNLPSLGAPVAPKALERK
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=273, Percent_Identity=38.8278388278388, Blast_Score=183, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 42925; Mature: 42925
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWDWDKLQEKRQRQQGANPPPKPPRNTEPDNDEGQDRQPPRARRTPFNGRGRGDDNPLK CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHH KLSQMNLPNGKAFFLIGLAVVGLWLLSGIYIINPDEQGVVLRFGKYNRTEGPGPHYAWPA HHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCC PIESVYKPQVTQVLRSEVGFRSVGQSTTFQQGQVRTVSEEASMLTGDENIVNVQFSVQYK CHHHHHCHHHHHHHHHHCCHHHCCCCCCCCCCCEEEHHHHHHHCCCCCCEEEEEEEEEEE IGDPVQYLFNVSAPTALVRNAAEAAMREVIGNSQIDSAITDGKLKIQSEATQLLQTILDR CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEHHHHHHHHHHHHHH YGAGIQVLAVQLQDVHPPQEVIDAFKDVASAREDKSRIINEAEAYRNELLPKARGQAAAM HCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHH LNEAESYHAVRVRTAEGETSRFDALSAEHRKAPKVTEQRLYYETMEDILAGADEKVLMDA HHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEC PAASRALPYLNLPSLGAPVAPKALERK CCHHHCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MNWDWDKLQEKRQRQQGANPPPKPPRNTEPDNDEGQDRQPPRARRTPFNGRGRGDDNPLK CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHH KLSQMNLPNGKAFFLIGLAVVGLWLLSGIYIINPDEQGVVLRFGKYNRTEGPGPHYAWPA HHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCC PIESVYKPQVTQVLRSEVGFRSVGQSTTFQQGQVRTVSEEASMLTGDENIVNVQFSVQYK CHHHHHCHHHHHHHHHHCCHHHCCCCCCCCCCCEEEHHHHHHHCCCCCCEEEEEEEEEEE IGDPVQYLFNVSAPTALVRNAAEAAMREVIGNSQIDSAITDGKLKIQSEATQLLQTILDR CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEHHHHHHHHHHHHHH YGAGIQVLAVQLQDVHPPQEVIDAFKDVASAREDKSRIINEAEAYRNELLPKARGQAAAM HCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHH LNEAESYHAVRVRTAEGETSRFDALSAEHRKAPKVTEQRLYYETMEDILAGADEKVLMDA HHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEC PAASRALPYLNLPSLGAPVAPKALERK CCHHHCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]