| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220904064
Identifier: 220904064
GI number: 220904064
Start: 925601
End: 926332
Strand: Reverse
Name: 220904064
Synonym: Ddes_0790
Alternate gene names: NA
Gene position: 926332-925601 (Counterclockwise)
Preceding gene: 220904065
Following gene: 220904053
Centisome position: 32.24
GC content: 60.79
Gene sequence:
>732_bases ATGTCTGGAAATATCCGTTCGTCCGTAACGAACGCCAACGGCACGGCCTTCGGAAAGCCTGACTTTCCGGAGGCCGCCGA TGTTCATACGCCTTCTCTTGCGGCCACCACACCCGGCGGTGCTACCCCTGCCGCGCCTGAAAAGCTGCCCCGCCACTCGC GCAGCCTTTTACTGCACGTCTGCTGCGGGCCGTGCGCCATCATGCCTGCCACCCGGCTGCTGGATGAAGGTTTTGCAGTT ACCGCCTGGTACATGAATCCCAACATCCACCCGCTTTCGGAATATCTGCGCCGCAGGGATGCCGCCACAGAATGCGCACG GCATCTGGGCATACCCATTGTGTATGACGACGCCAGCTGGGACATCACCGCATGGCTGCGCGCTGTGGCCGGACGTGATG CTGCTCCGCAGCGTTGTGCCTACTGCTGCACGAGCCGCATAGAGGCCGCCTTTGCCACTGCCGCCCGGCTGGGCTTTGCC TTTGTGAGCAGCAGCCTGCTCTATTCCCGCTATCAGCCTCACGAGGTTATCCGCGAAGCCGGGGCACGGCTGGCACAAGC CGCAGACGCAGGGCCGGATTTTGTGTACCGGGATTTTCGCGCGGACTGGCAGGAAGGCATTGACCGCTCCAAGTCTCTGG AGCTGTACCGCCAGCCCTACTGCGGCTGTATTTACAGCGAAGCCGAGCGCTATGAAAAAAAGCTGGCACGGCTCATAAAA AATAATCTGTAA
Upstream 100 bases:
>100_bases GCAAGGAAAAATGCGTTTACGGCACGTCTGCCGAACTGGCTCTGTATCTGCTCAACCACAAGCGCGACAGCTTGCGCGAA ATGGAGCAGGACTACGGCAA
Downstream 100 bases:
>100_bases TTTTTACACTTTTTGCTTGACCTTAGCCCGGATTTTCCGTAAACACTTCCTTGCCTCAACGATCCCCGATAGCTCAATCG GCAGAGCGGGTGACTGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSGNIRSSVTNANGTAFGKPDFPEAADVHTPSLAATTPGGATPAAPEKLPRHSRSLLLHVCCGPCAIMPATRLLDEGFAV TAWYMNPNIHPLSEYLRRRDAATECARHLGIPIVYDDASWDITAWLRAVAGRDAAPQRCAYCCTSRIEAAFATAARLGFA FVSSSLLYSRYQPHEVIREAGARLAQAADAGPDFVYRDFRADWQEGIDRSKSLELYRQPYCGCIYSEAERYEKKLARLIK NNL
Sequences:
>Translated_243_residues MSGNIRSSVTNANGTAFGKPDFPEAADVHTPSLAATTPGGATPAAPEKLPRHSRSLLLHVCCGPCAIMPATRLLDEGFAV TAWYMNPNIHPLSEYLRRRDAATECARHLGIPIVYDDASWDITAWLRAVAGRDAAPQRCAYCCTSRIEAAFATAARLGFA FVSSSLLYSRYQPHEVIREAGARLAQAADAGPDFVYRDFRADWQEGIDRSKSLELYRQPYCGCIYSEAERYEKKLARLIK NNL >Mature_242_residues SGNIRSSVTNANGTAFGKPDFPEAADVHTPSLAATTPGGATPAAPEKLPRHSRSLLLHVCCGPCAIMPATRLLDEGFAVT AWYMNPNIHPLSEYLRRRDAATECARHLGIPIVYDDASWDITAWLRAVAGRDAAPQRCAYCCTSRIEAAFATAARLGFAF VSSSLLYSRYQPHEVIREAGARLAQAADAGPDFVYRDFRADWQEGIDRSKSLELYRQPYCGCIYSEAERYEKKLARLIKN NL
Specific function: Unknown
COG id: COG1636
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003828 [H]
Pfam domain/function: PF02677 DUF208 [H]
EC number: NA
Molecular weight: Translated: 26759; Mature: 26628
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNIRSSVTNANGTAFGKPDFPEAADVHTPSLAATTPGGATPAAPEKLPRHSRSLLLHV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH CCGPCAIMPATRLLDEGFAVTAWYMNPNIHPLSEYLRRRDAATECARHLGIPIVYDDASW HHCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCC DITAWLRAVAGRDAAPQRCAYCCTSRIEAAFATAARLGFAFVSSSLLYSRYQPHEVIREA CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH GARLAQAADAGPDFVYRDFRADWQEGIDRSKSLELYRQPYCGCIYSEAERYEKKLARLIK HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH NNL CCC >Mature Secondary Structure SGNIRSSVTNANGTAFGKPDFPEAADVHTPSLAATTPGGATPAAPEKLPRHSRSLLLHV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH CCGPCAIMPATRLLDEGFAVTAWYMNPNIHPLSEYLRRRDAATECARHLGIPIVYDDASW HHCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCC DITAWLRAVAGRDAAPQRCAYCCTSRIEAAFATAARLGFAFVSSSLLYSRYQPHEVIREA CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH GARLAQAADAGPDFVYRDFRADWQEGIDRSKSLELYRQPYCGCIYSEAERYEKKLARLIK HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH NNL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]