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The map label for this gene is ybhL [H]

Identifier: 220904012

GI number: 220904012

Start: 871020

End: 871724

Strand: Reverse

Name: ybhL [H]

Synonym: Ddes_0738

Alternate gene names: 220904012

Gene position: 871724-871020 (Counterclockwise)

Preceding gene: 220904014

Following gene: 220904011

Centisome position: 30.34

GC content: 58.16

Gene sequence:

>705_bases
ATGACCAATCCCCGCAGTGTAGCGCATAGTGGCGTAAGCAGCGTTACTTCCCTTTACATGCGCCAGGTTTACCAGTGGAT
GACGCTGGGCCTGGGCATCACCACGGTTATGGCCTGGTTTGTTGCCAGCACGCCCGCAGTACAGCAGGTCATCTTCGGCA
ATTCGCTGATCATGATCGGCCTCATCGTGGCGCAGTTCGGCCTTGTCATCGCCATTTCCGCCGCAGTGCACAAAATGTCC
GGCAGCACGGCCACAGGGCTGTTTCTGCTGTATTCCGCGCTGACGGGGGCAACACTGTCGTCCATCTTTGTGGTCTACCC
CGTTGCCTCCATCACCAACGCCTTTCTGGTTACCACCGGAACCTTCCTGGCCATGACCGTTTACGGCACCGTGACCAAGC
GCGACCTCACGGCCATGGGCAGCTTTCTGTTCATGGGCCTGATCGGCATCATTATCGCCATGGTGGTCAATATCTTCCTC
AAGAGCGCCATGATGGACTTTGTGGTGAGCTGCCTTGGTGTGCTTATCTTTACCGGCCTTACGGCCTATGACACCCAGAA
GCTGCGCCGGTTCGGCGAAAGCGCCCCTCTGGACGACGCCACGGCCCTGCGCCGCGGAGCCATTTTGGGCGCGCTGACCC
TGTATCTGGACTTTATCAATCTTTTCCTCATGCTGCTGCGCCTTTTTGGCGGCAACCGCAACTGA

Upstream 100 bases:

>100_bases
CAGGCATGAAAAAAAATGGCCCGTTGCCAGGCATTTCATGCTTTTCAGACGCACCTGTTCCGCGGGCGCTCCGGATTCAA
CAGTTTTTTGGAGGATAGTA

Downstream 100 bases:

>100_bases
TTGCCGCAATTCGGGCAACAGCTGAGAGCAGGTACGCGATGGGGGGCGAAAGGCCAGGCCTTTTGCCCCTTTTTCACGCC
TTGCCAGTGAACAATTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTNPRSVAHSGVSSVTSLYMRQVYQWMTLGLGITTVMAWFVASTPAVQQVIFGNSLIMIGLIVAQFGLVIAISAAVHKMS
GSTATGLFLLYSALTGATLSSIFVVYPVASITNAFLVTTGTFLAMTVYGTVTKRDLTAMGSFLFMGLIGIIIAMVVNIFL
KSAMMDFVVSCLGVLIFTGLTAYDTQKLRRFGESAPLDDATALRRGAILGALTLYLDFINLFLMLLRLFGGNRN

Sequences:

>Translated_234_residues
MTNPRSVAHSGVSSVTSLYMRQVYQWMTLGLGITTVMAWFVASTPAVQQVIFGNSLIMIGLIVAQFGLVIAISAAVHKMS
GSTATGLFLLYSALTGATLSSIFVVYPVASITNAFLVTTGTFLAMTVYGTVTKRDLTAMGSFLFMGLIGIIIAMVVNIFL
KSAMMDFVVSCLGVLIFTGLTAYDTQKLRRFGESAPLDDATALRRGAILGALTLYLDFINLFLMLLRLFGGNRN
>Mature_233_residues
TNPRSVAHSGVSSVTSLYMRQVYQWMTLGLGITTVMAWFVASTPAVQQVIFGNSLIMIGLIVAQFGLVIAISAAVHKMSG
STATGLFLLYSALTGATLSSIFVVYPVASITNAFLVTTGTFLAMTVYGTVTKRDLTAMGSFLFMGLIGIIIAMVVNIFLK
SAMMDFVVSCLGVLIFTGLTAYDTQKLRRFGESAPLDDATALRRGAILGALTLYLDFINLFLMLLRLFGGNRN

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Homo sapiens, GI116812579, Length=211, Percent_Identity=29.3838862559242, Blast_Score=74, Evalue=9e-14,
Organism=Escherichia coli, GI1787004, Length=230, Percent_Identity=54.3478260869565, Blast_Score=242, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25116; Mature: 24985

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNPRSVAHSGVSSVTSLYMRQVYQWMTLGLGITTVMAWFVASTPAVQQVIFGNSLIMIG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHH
LIVAQFGLVIAISAAVHKMSGSTATGLFLLYSALTGATLSSIFVVYPVASITNAFLVTTG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFLAMTVYGTVTKRDLTAMGSFLFMGLIGIIIAMVVNIFLKSAMMDFVVSCLGVLIFTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TAYDTQKLRRFGESAPLDDATALRRGAILGALTLYLDFINLFLMLLRLFGGNRN
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TNPRSVAHSGVSSVTSLYMRQVYQWMTLGLGITTVMAWFVASTPAVQQVIFGNSLIMIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHH
LIVAQFGLVIAISAAVHKMSGSTATGLFLLYSALTGATLSSIFVVYPVASITNAFLVTTG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFLAMTVYGTVTKRDLTAMGSFLFMGLIGIIIAMVVNIFLKSAMMDFVVSCLGVLIFTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TAYDTQKLRRFGESAPLDDATALRRGAILGALTLYLDFINLFLMLLRLFGGNRN
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]