| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is mviN [H]
Identifier: 220904010
GI number: 220904010
Start: 866749
End: 868362
Strand: Reverse
Name: mviN [H]
Synonym: Ddes_0736
Alternate gene names: 220904010
Gene position: 868362-866749 (Counterclockwise)
Preceding gene: 220904011
Following gene: 220904009
Centisome position: 30.22
GC content: 63.32
Gene sequence:
>1614_bases ATGGGTCTTTTGTCCGCCAAACAGCGCATGGGTGCGGCGGCCCTTATACTGGCCGCCAGCACCATCATTTCGCGCCTCAT GGGCCTTGTTCGCGACAAGGTCATCTCATGGCAGTTTGGGGCGGGGAGCGAGGCGGACATGTACTTTGCCGCCTTTGTGG TACCGGACATCATCAACTACATGCTGGCCGGCGGCTTTATGTCCATCACCATCATCCCCCTGCTGTCGCGCCGATTTCAG GAGGATGAAGACGACGCCTGGAGCTTTTTTTCCTGCGTGTTCTGCTGGATGGCCGTGGCATCCCTGGCCCTGACTCTGAC GGGTATGCTGGCCGCCGGGCCGCTGGCCCGCCTGATCGCCCCCGGCTTTACGCCGGAACAGTGGGACCGGCTGGCCTTTT TTATGCGTATTGTGCTGCCCGCGCAGGTCTTTTTTCTCTGCGGGGCCTGCATAACGGCCCTGCTCTTTCTGCGGCGCCAG TTCCGCGTACCTGCGCTGGCCCCCATTATCTATAACGGCTGCATCATTCTTGGCGGCCTCACCCTGCCCTGGCTGGCGGG GCTGGCCCCGGTGCGCGCGGTGCTCTCCCCCGCCCTGCTGATCCATTTTGAAGGCATGACGGGGTACTGCGTGGGCGTTA CCGTGGGCGCGGCCCTGGGAACTTTCGCTCTGCCTCTGGCAGCAGCCATGCAGGGTGGCATGCGTCTGCGCCCCGTGTGG CGGCATCGCCTTATGGGCAAATTTCTTGTCACCGCCCTGCCCCTCATGCTGGGGCAGACCATCATGATGCTGGACGAGCA GTTTTTGCGGGTATTCGGCTCTCTGGCCGGGGATGGCGCGGTGAGCCTGCTCAACTACGCCCGCCGCATCACGCAAGTGC CTGTGGGTCTTATGGGACAGGCTGCCGCCGTGGCATCGTATCCTTTTCTGGTCAAGCTGCTTACCGAAGGCGACAGGGAA GGCTTTGACCGCACTCTGCGCACGGCGTTGCGGGCCAGCCTGGGGCTTATTATCCCCTGCGCCCTGGTCATGATCGCCTG CGCCGGGCCGATTTTGGGCGTTATTTTCCAGGGCGGCCGCTTTGGCCCCGCAGACACCCTTGCCGCCACGCCCCTGACAC AAATCATGCTGGCGGTCACGCCTTTCTGGATACTCTACATGGTGCTGGTACGGGCCTATTACGCCCACGGCGACACCATT ACCCCGGCAGTCACCGGCACAATCATGACAGTGGTTTGTCTGCCCATTTACTATTACTGGGCAGTGCCGCGCGGGGCATG GGCCATTGCCGCGCTTTCCGGCGTGAGCGTGAGCCTGTATGTGCTGTGGCTTATGACCATTTGGGCGCGGCGACAGGGGC TGGGCGCTTTTACGGGCCTGGGCGGCCTTGCGCTGCGCGCCGTCGCCTGCTCCCTGCCCGGTGCGGCCGCCGCATGGTGG CTGAGCGCCCATACCCTCGGCCGCGCGGCAGATCTTGGCCTGCACCCTCTTTGGGCGGCCCTGCTGGCTCTTGGCTTGGG TGGCTGCGCCTTTATGCTGCTTTTTCTACCCTTGTGCCTGTGGCTGGCCCCGTCCATTCTGGAGCCTGTATTGCGGAGAT TACGGCGAACATAA
Upstream 100 bases:
>100_bases GCGGTCAGTCGGCCCGCAAGGGCAAAAACGGCACGGGCACACCCGCAAAATCCGGCAGGCCCGTCAGAAGCGGTAAAAAA ACAGCAGGTAAGCGCGGCTG
Downstream 100 bases:
>100_bases CTCTGCTCCCGAGGATCCGCGCATGAACATTGAAGACGTGGTAAACTCTACAGCCAGAGCCGTGCTGGATTTCTGGCTGC GGCACTGGCCGTTATGTCTG
Product: virulence factor MVIN family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MGLLSAKQRMGAAALILAASTIISRLMGLVRDKVISWQFGAGSEADMYFAAFVVPDIINYMLAGGFMSITIIPLLSRRFQ EDEDDAWSFFSCVFCWMAVASLALTLTGMLAAGPLARLIAPGFTPEQWDRLAFFMRIVLPAQVFFLCGACITALLFLRRQ FRVPALAPIIYNGCIILGGLTLPWLAGLAPVRAVLSPALLIHFEGMTGYCVGVTVGAALGTFALPLAAAMQGGMRLRPVW RHRLMGKFLVTALPLMLGQTIMMLDEQFLRVFGSLAGDGAVSLLNYARRITQVPVGLMGQAAAVASYPFLVKLLTEGDRE GFDRTLRTALRASLGLIIPCALVMIACAGPILGVIFQGGRFGPADTLAATPLTQIMLAVTPFWILYMVLVRAYYAHGDTI TPAVTGTIMTVVCLPIYYYWAVPRGAWAIAALSGVSVSLYVLWLMTIWARRQGLGAFTGLGGLALRAVACSLPGAAAAWW LSAHTLGRAADLGLHPLWAALLALGLGGCAFMLLFLPLCLWLAPSILEPVLRRLRRT
Sequences:
>Translated_537_residues MGLLSAKQRMGAAALILAASTIISRLMGLVRDKVISWQFGAGSEADMYFAAFVVPDIINYMLAGGFMSITIIPLLSRRFQ EDEDDAWSFFSCVFCWMAVASLALTLTGMLAAGPLARLIAPGFTPEQWDRLAFFMRIVLPAQVFFLCGACITALLFLRRQ FRVPALAPIIYNGCIILGGLTLPWLAGLAPVRAVLSPALLIHFEGMTGYCVGVTVGAALGTFALPLAAAMQGGMRLRPVW RHRLMGKFLVTALPLMLGQTIMMLDEQFLRVFGSLAGDGAVSLLNYARRITQVPVGLMGQAAAVASYPFLVKLLTEGDRE GFDRTLRTALRASLGLIIPCALVMIACAGPILGVIFQGGRFGPADTLAATPLTQIMLAVTPFWILYMVLVRAYYAHGDTI TPAVTGTIMTVVCLPIYYYWAVPRGAWAIAALSGVSVSLYVLWLMTIWARRQGLGAFTGLGGLALRAVACSLPGAAAAWW LSAHTLGRAADLGLHPLWAALLALGLGGCAFMLLFLPLCLWLAPSILEPVLRRLRRT >Mature_536_residues GLLSAKQRMGAAALILAASTIISRLMGLVRDKVISWQFGAGSEADMYFAAFVVPDIINYMLAGGFMSITIIPLLSRRFQE DEDDAWSFFSCVFCWMAVASLALTLTGMLAAGPLARLIAPGFTPEQWDRLAFFMRIVLPAQVFFLCGACITALLFLRRQF RVPALAPIIYNGCIILGGLTLPWLAGLAPVRAVLSPALLIHFEGMTGYCVGVTVGAALGTFALPLAAAMQGGMRLRPVWR HRLMGKFLVTALPLMLGQTIMMLDEQFLRVFGSLAGDGAVSLLNYARRITQVPVGLMGQAAAVASYPFLVKLLTEGDREG FDRTLRTALRASLGLIIPCALVMIACAGPILGVIFQGGRFGPADTLAATPLTQIMLAVTPFWILYMVLVRAYYAHGDTIT PAVTGTIMTVVCLPIYYYWAVPRGAWAIAALSGVSVSLYVLWLMTIWARRQGLGAFTGLGGLALRAVACSLPGAAAAWWL SAHTLGRAADLGLHPLWAALLALGLGGCAFMLLFLPLCLWLAPSILEPVLRRLRRT
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=397, Percent_Identity=26.7002518891688, Blast_Score=118, Evalue=1e-27,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 57779; Mature: 57648
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLSAKQRMGAAALILAASTIISRLMGLVRDKVISWQFGAGSEADMYFAAFVVPDIINY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH MLAGGFMSITIIPLLSRRFQEDEDDAWSFFSCVFCWMAVASLALTLTGMLAAGPLARLIA HHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGFTPEQWDRLAFFMRIVLPAQVFFLCGACITALLFLRRQFRVPALAPIIYNGCIILGGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCCC TLPWLAGLAPVRAVLSPALLIHFEGMTGYCVGVTVGAALGTFALPLAAAMQGGMRLRPVW HHHHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH RHRLMGKFLVTALPLMLGQTIMMLDEQFLRVFGSLAGDGAVSLLNYARRITQVPVGLMGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCH AAAVASYPFLVKLLTEGDREGFDRTLRTALRASLGLIIPCALVMIACAGPILGVIFQGGR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FGPADTLAATPLTQIMLAVTPFWILYMVLVRAYYAHGDTITPAVTGTIMTVVCLPIYYYW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AVPRGAWAIAALSGVSVSLYVLWLMTIWARRQGLGAFTGLGGLALRAVACSLPGAAAAWW HCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHH LSAHTLGRAADLGLHPLWAALLALGLGGCAFMLLFLPLCLWLAPSILEPVLRRLRRT HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GLLSAKQRMGAAALILAASTIISRLMGLVRDKVISWQFGAGSEADMYFAAFVVPDIINY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH MLAGGFMSITIIPLLSRRFQEDEDDAWSFFSCVFCWMAVASLALTLTGMLAAGPLARLIA HHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGFTPEQWDRLAFFMRIVLPAQVFFLCGACITALLFLRRQFRVPALAPIIYNGCIILGGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCCC TLPWLAGLAPVRAVLSPALLIHFEGMTGYCVGVTVGAALGTFALPLAAAMQGGMRLRPVW HHHHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH RHRLMGKFLVTALPLMLGQTIMMLDEQFLRVFGSLAGDGAVSLLNYARRITQVPVGLMGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCH AAAVASYPFLVKLLTEGDREGFDRTLRTALRASLGLIIPCALVMIACAGPILGVIFQGGR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FGPADTLAATPLTQIMLAVTPFWILYMVLVRAYYAHGDTITPAVTGTIMTVVCLPIYYYW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AVPRGAWAIAALSGVSVSLYVLWLMTIWARRQGLGAFTGLGGLALRAVACSLPGAAAAWW HCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHH LSAHTLGRAADLGLHPLWAALLALGLGGCAFMLLFLPLCLWLAPSILEPVLRRLRRT HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9457888; 10952301 [H]