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The map label for this gene is 220903923

Identifier: 220903923

GI number: 220903923

Start: 786041

End: 786865

Strand: Direct

Name: 220903923

Synonym: Ddes_0648

Alternate gene names: NA

Gene position: 786041-786865 (Clockwise)

Preceding gene: 220903922

Following gene: 220903928

Centisome position: 27.36

GC content: 55.52

Gene sequence:

>825_bases
ATGAAAAGCATCAAAACCCTGATCTTCGCCGGGCTTCTGGCCCTGATGGCAGTGCCTGCCCAGGCGCACTTCATGGTCAT
GTACACGCCGGAAGTGGCCAAGAGCGAACCCAGCGATCTGGACGTCCGCATTGTCTTCACTCACCCGGCAGAAGCCGGAC
ATACTATGGATATGGGCGGGGTGAAGGAGTTTTATGCCATGTATCAGCGTGGCGAAAATGAGCCGAAAAAAATCGACCTC
ATGAGTTCGCTGAAGCCCATTACCTGGAAAAATCCCGAATCCTCCGGTCCGGCTTTTTCTGCCCTGATTCCCCGCAAGGA
CATGCGCTCCATGGGCGACTATACATTTGTGATGGTCCCCGGCTACTATCTTGAAAAAGAAGAAGACGTCTACATGCAGC
AGATCACCAAGCTGGTGGTCAACGTGGGCGGCATCCCCGGCAACTGGAATTCCGCGCTGGGTCTGCCTTGCGAAATCGTG
CCCCTGATCAAGCCTTACGGCGTATGGACCGGCAACGTGTTCAAGGCGCGTGTGCTTTCCAACGGCAAGCCCGTGCCCAA
CGCCGAAGTGGAAGTGGAATACATGAACCACATGCCCGACCTCAAGGCCAATGCCATGACCAAGAAGGGCATCGTCAAGT
ACCCGCATGATGCTTTTGTTACCCAGACCATCTTTACCGATGATCAGGGCTACCTGACCTTCGGCATTCCCAAGGCCGGC
TGGTGGGGCTTTGCCGCTCTTGGCGTAGGCCCGGACAAGGAATACAAGGGCAAGGAGCTTTCCCAGGATGCCGTTATCTG
GGTCAAGGCTGTGGATATGAAGTAG

Upstream 100 bases:

>100_bases
AGGTGGAAGTGGACGGTTCGAAGATCGTTCAGTAGCAGGCCGCGCTGCGATTTTTTTGAAAAATGGAAGACTTTGAAATT
CAAATTCTAATGGAGGTTTC

Downstream 100 bases:

>100_bases
GCTTTGACGGGCAAAGCGGCTGATTGCCGTGGTGGTCGGCTGCTTTGCATCTGCGCTGCCTGTGCCGCGCAGGATTGTCT
CAATACGGCATTCGTGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Co2+ Transport System Periplasmic Component; Nickel Transport Complex Subunit NikM; Lipoprotein; ATP-Dependent DNA Ligase; NikK Nickel ECF Transporter

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKSIKTLIFAGLLALMAVPAQAHFMVMYTPEVAKSEPSDLDVRIVFTHPAEAGHTMDMGGVKEFYAMYQRGENEPKKIDL
MSSLKPITWKNPESSGPAFSALIPRKDMRSMGDYTFVMVPGYYLEKEEDVYMQQITKLVVNVGGIPGNWNSALGLPCEIV
PLIKPYGVWTGNVFKARVLSNGKPVPNAEVEVEYMNHMPDLKANAMTKKGIVKYPHDAFVTQTIFTDDQGYLTFGIPKAG
WWGFAALGVGPDKEYKGKELSQDAVIWVKAVDMK

Sequences:

>Translated_274_residues
MKSIKTLIFAGLLALMAVPAQAHFMVMYTPEVAKSEPSDLDVRIVFTHPAEAGHTMDMGGVKEFYAMYQRGENEPKKIDL
MSSLKPITWKNPESSGPAFSALIPRKDMRSMGDYTFVMVPGYYLEKEEDVYMQQITKLVVNVGGIPGNWNSALGLPCEIV
PLIKPYGVWTGNVFKARVLSNGKPVPNAEVEVEYMNHMPDLKANAMTKKGIVKYPHDAFVTQTIFTDDQGYLTFGIPKAG
WWGFAALGVGPDKEYKGKELSQDAVIWVKAVDMK
>Mature_274_residues
MKSIKTLIFAGLLALMAVPAQAHFMVMYTPEVAKSEPSDLDVRIVFTHPAEAGHTMDMGGVKEFYAMYQRGENEPKKIDL
MSSLKPITWKNPESSGPAFSALIPRKDMRSMGDYTFVMVPGYYLEKEEDVYMQQITKLVVNVGGIPGNWNSALGLPCEIV
PLIKPYGVWTGNVFKARVLSNGKPVPNAEVEVEYMNHMPDLKANAMTKKGIVKYPHDAFVTQTIFTDDQGYLTFGIPKAG
WWGFAALGVGPDKEYKGKELSQDAVIWVKAVDMK

Specific function: Unknown

COG id: COG5266

COG function: function code P; ABC-type Co2+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30450; Mature: 30450

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIKTLIFAGLLALMAVPAQAHFMVMYTPEVAKSEPSDLDVRIVFTHPAEAGHTMDMGG
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCEEEEEEECCCCCCCCCCCCC
VKEFYAMYQRGENEPKKIDLMSSLKPITWKNPESSGPAFSALIPRKDMRSMGDYTFVMVP
HHHHHHHHHCCCCCCCEEEHHHHCCCCEECCCCCCCCEEEEECCCHHHHHCCCEEEEEEC
GYYLEKEEDVYMQQITKLVVNVGGIPGNWNSALGLPCEIVPLIKPYGVWTGNVFKARVLS
CEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEC
NGKPVPNAEVEVEYMNHMPDLKANAMTKKGIVKYPHDAFVTQTIFTDDQGYLTFGIPKAG
CCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCEEEECCCCCC
WWGFAALGVGPDKEYKGKELSQDAVIWVKAVDMK
CCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MKSIKTLIFAGLLALMAVPAQAHFMVMYTPEVAKSEPSDLDVRIVFTHPAEAGHTMDMGG
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCEEEEEEECCCCCCCCCCCCC
VKEFYAMYQRGENEPKKIDLMSSLKPITWKNPESSGPAFSALIPRKDMRSMGDYTFVMVP
HHHHHHHHHCCCCCCCEEEHHHHCCCCEECCCCCCCCEEEEECCCHHHHHCCCEEEEEEC
GYYLEKEEDVYMQQITKLVVNVGGIPGNWNSALGLPCEIVPLIKPYGVWTGNVFKARVLS
CEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEC
NGKPVPNAEVEVEYMNHMPDLKANAMTKKGIVKYPHDAFVTQTIFTDDQGYLTFGIPKAG
CCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCEEEECCCCCC
WWGFAALGVGPDKEYKGKELSQDAVIWVKAVDMK
CCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA