| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903918
Identifier: 220903918
GI number: 220903918
Start: 781233
End: 782126
Strand: Direct
Name: 220903918
Synonym: Ddes_0643
Alternate gene names: NA
Gene position: 781233-782126 (Clockwise)
Preceding gene: 220903917
Following gene: 220903919
Centisome position: 27.19
GC content: 59.62
Gene sequence:
>894_bases ATGCAGGACAAAAGTATTTTTCAGCTCAGCCGGGGCGAATGGGCGCTGGTTGGCATAACCATAATATGGGGCACGACCTT CCTTATCATCCGCAACGCCCTGGACGTGACCGGGCCACTGTTCTTTGTGGGCCTGCGTTTTGGTTCGGCGGCTGTGGCGC TGACGCTTGTTTCTTTGCCTGTCCTGCGCGGCCTGACCCTGCACGAACTTTTTGCGGGTTCGATCATAGGGCTTTCGCTG CTGGGGGGCTACGCCCTGCAAACCTTTGGCCTGCAAACCATTACTGCCAGCAAGTCGGCATTTATAACGGCTTTTTATGT GCCTACAGTGCCGTTGCTGCAATGGCTCTTCATGCGGCGCGCGCCCAGCAGAATGGGCTGGCTCGGCATTGGCTGCGCGC TGCTGGGCCTGATCATGCTGGCCGGGCCGGACGGCGTTTCGCCGGGTTTCAGCACCGGGGAACTTCTTACCTTGCTGGGG GCCGTGGCCTGCGCGCTGGAAATTTTGTTCATCAGCTATTTTGCCGGTACGGTTAACGTACGCAGGGTCACTGTGGTGCA GGTGACGGTGACCGCGCTGCTGAGTTTCAGCCTGATGCCGCTGGCAGGAGAATCCGTACCGGAGTTTTCCTGGCTGCTGG TGTGCAGCGCCGGGGGGCTGGGGCTTGCCACGGCCCTTATCCAACTGGTCATGAACTGGGCGCAGAAAAGCATTTCGCCC ACAAGGGCCACCCTGATCTACGCGGGCGAACCGGTATGGGCGGCCATTTTCGGGCGTATGGCCGGAGAGAGGCTGCCTTT TATGGGGCTTGTGGGCGGCGCGTTTGTGGTGGCGGGCGTGCTGATAAGCAATCTGAACCCGCGCCGTAAGGGAAAGGAAA AAAAATCCGCATAA
Upstream 100 bases:
>100_bases CATTTGCAGTGGTGCGGGCTATCATGGATGGTCTGCCGCATTTTCCGGCAGCGCGTCTGCGGGGACTGCCCGCCCAGAGA GGAGAGAAAGGTTCACACCT
Downstream 100 bases:
>100_bases GCGGCAGGCGGCCTGAAGTATCCGGATATAGTCCCGGCAGTTGGCGGACAGCCATTTTGCGAGACGGGCAGGGCACCCTG CACGGATCCGTCAGGTTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MQDKSIFQLSRGEWALVGITIIWGTTFLIIRNALDVTGPLFFVGLRFGSAAVALTLVSLPVLRGLTLHELFAGSIIGLSL LGGYALQTFGLQTITASKSAFITAFYVPTVPLLQWLFMRRAPSRMGWLGIGCALLGLIMLAGPDGVSPGFSTGELLTLLG AVACALEILFISYFAGTVNVRRVTVVQVTVTALLSFSLMPLAGESVPEFSWLLVCSAGGLGLATALIQLVMNWAQKSISP TRATLIYAGEPVWAAIFGRMAGERLPFMGLVGGAFVVAGVLISNLNPRRKGKEKKSA
Sequences:
>Translated_297_residues MQDKSIFQLSRGEWALVGITIIWGTTFLIIRNALDVTGPLFFVGLRFGSAAVALTLVSLPVLRGLTLHELFAGSIIGLSL LGGYALQTFGLQTITASKSAFITAFYVPTVPLLQWLFMRRAPSRMGWLGIGCALLGLIMLAGPDGVSPGFSTGELLTLLG AVACALEILFISYFAGTVNVRRVTVVQVTVTALLSFSLMPLAGESVPEFSWLLVCSAGGLGLATALIQLVMNWAQKSISP TRATLIYAGEPVWAAIFGRMAGERLPFMGLVGGAFVVAGVLISNLNPRRKGKEKKSA >Mature_297_residues MQDKSIFQLSRGEWALVGITIIWGTTFLIIRNALDVTGPLFFVGLRFGSAAVALTLVSLPVLRGLTLHELFAGSIIGLSL LGGYALQTFGLQTITASKSAFITAFYVPTVPLLQWLFMRRAPSRMGWLGIGCALLGLIMLAGPDGVSPGFSTGELLTLLG AVACALEILFISYFAGTVNVRRVTVVQVTVTALLSFSLMPLAGESVPEFSWLLVCSAGGLGLATALIQLVMNWAQKSISP TRATLIYAGEPVWAAIFGRMAGERLPFMGLVGGAFVVAGVLISNLNPRRKGKEKKSA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31510; Mature: 31510
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDKSIFQLSRGEWALVGITIIWGTTFLIIRNALDVTGPLFFVGLRFGSAAVALTLVSLP CCCCCCEEECCCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHH VLRGLTLHELFAGSIIGLSLLGGYALQTFGLQTITASKSAFITAFYVPTVPLLQWLFMRR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCHHHHHHHHHHHC APSRMGWLGIGCALLGLIMLAGPDGVSPGFSTGELLTLLGAVACALEILFISYFAGTVNV CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE RRVTVVQVTVTALLSFSLMPLAGESVPEFSWLLVCSAGGLGLATALIQLVMNWAQKSISP EEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC TRATLIYAGEPVWAAIFGRMAGERLPFMGLVGGAFVVAGVLISNLNPRRKGKEKKSA CCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCC >Mature Secondary Structure MQDKSIFQLSRGEWALVGITIIWGTTFLIIRNALDVTGPLFFVGLRFGSAAVALTLVSLP CCCCCCEEECCCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHH VLRGLTLHELFAGSIIGLSLLGGYALQTFGLQTITASKSAFITAFYVPTVPLLQWLFMRR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCHHHHHHHHHHHC APSRMGWLGIGCALLGLIMLAGPDGVSPGFSTGELLTLLGAVACALEILFISYFAGTVNV CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE RRVTVVQVTVTALLSFSLMPLAGESVPEFSWLLVCSAGGLGLATALIQLVMNWAQKSISP EEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC TRATLIYAGEPVWAAIFGRMAGERLPFMGLVGGAFVVAGVLISNLNPRRKGKEKKSA CCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]