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The map label for this gene is torY [H]

Identifier: 220903889

GI number: 220903889

Start: 743742

End: 744314

Strand: Direct

Name: torY [H]

Synonym: Ddes_0614

Alternate gene names: 220903889

Gene position: 743742-744314 (Clockwise)

Preceding gene: 220903881

Following gene: 220903890

Centisome position: 25.88

GC content: 59.51

Gene sequence:

>573_bases
ATGCCTTATCCGCGAAAGCGCGTCTGGATTATCGGCAGCGTCATTCTGGCAGCGTGTGTGGCGGTGGCGGGCGCGGGGGT
GGCCTACACCTCCGGCACCAGCTTTTGCCTGTCCTGTCACGAAATGCGCGTATATCAGGAAGAGATGCACCTTTCATCGC
ATGCGGCCGATGCCAAGGGCCAGCCCATCGGCTGTTCTCAATGCCACATTCCGTCAGGCAATGTGGTGCGCATGCTGGGG
GCGAAGGCCTGGCTCGGCGTCAAAGACCTGTGGGTCCACACGACAGAAGGCGGGACAGATCTCGACCGCGCGGCCATGCA
GCCCATAGCCCGGCGTTTTACCGATGATGCCAACTGCCGGGCCTGTCATCAGGATCTGGCAAGAAATGCCAAAAATGATG
GGCCTGTTTCCGAGGTGGGCAGGCTTGCGCACGAAAACTACGAAGGCAAAAACGGTCAGGCCCGCAGCGGTTGCGTGGGG
TGCCACCGTAATCTTGCCCACCTGCCTGTTTTTGACGAGCGTATCCCCACAAATCAGAAGTTCGCCCAGAAAATCAAGGA
GATCCGGCCATGA

Upstream 100 bases:

>100_bases
AACAAGAACTTGTTCAAAGGGCGACAGCTTTTTTAATCGCACGGCAAGCGCAATCAATGTTTTCAAACGGTGCTCTTTTT
ATTGATGGAGGTGCACTCCC

Downstream 100 bases:

>100_bases
AGTCCTGTAAGATCGTGCTTTTTTCCCTGCTGGCGCTGCTGATGCTGGGGGGCGCCTATTTCGCCTACATGGCCTGGGCT
TTTCCCACTGACCGTTGCGA

Product: NapC/NirT cytochrome c domain-containing protein

Products: H2O; trimethylamine; NAD [C]

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MPYPRKRVWIIGSVILAACVAVAGAGVAYTSGTSFCLSCHEMRVYQEEMHLSSHAADAKGQPIGCSQCHIPSGNVVRMLG
AKAWLGVKDLWVHTTEGGTDLDRAAMQPIARRFTDDANCRACHQDLARNAKNDGPVSEVGRLAHENYEGKNGQARSGCVG
CHRNLAHLPVFDERIPTNQKFAQKIKEIRP

Sequences:

>Translated_190_residues
MPYPRKRVWIIGSVILAACVAVAGAGVAYTSGTSFCLSCHEMRVYQEEMHLSSHAADAKGQPIGCSQCHIPSGNVVRMLG
AKAWLGVKDLWVHTTEGGTDLDRAAMQPIARRFTDDANCRACHQDLARNAKNDGPVSEVGRLAHENYEGKNGQARSGCVG
CHRNLAHLPVFDERIPTNQKFAQKIKEIRP
>Mature_189_residues
PYPRKRVWIIGSVILAACVAVAGAGVAYTSGTSFCLSCHEMRVYQEEMHLSSHAADAKGQPIGCSQCHIPSGNVVRMLGA
KAWLGVKDLWVHTTEGGTDLDRAAMQPIARRFTDDANCRACHQDLARNAKNDGPVSEVGRLAHENYEGKNGQARSGCVGC
HRNLAHLPVFDERIPTNQKFAQKIKEIRP

Specific function: Part of the anaerobic respiratory chain of trimethylamine-N-oxide reductase TorZ. Required for electron transfer to the TorZ terminal enzyme [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TorC/TorY family [H]

Homologues:

Organism=Escherichia coli, GI1788181, Length=149, Percent_Identity=30.8724832214765, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1787230, Length=169, Percent_Identity=30.1775147928994, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009154
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 20750; Mature: 20619

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYPRKRVWIIGSVILAACVAVAGAGVAYTSGTSFCLSCHEMRVYQEEMHLSSHAADAKG
CCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
QPIGCSQCHIPSGNVVRMLGAKAWLGVKDLWVHTTEGGTDLDRAAMQPIARRFTDDANCR
CCCCCCCCCCCCCCCHHHHHHHHHCCHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCHH
ACHQDLARNAKNDGPVSEVGRLAHENYEGKNGQARSGCVGCHRNLAHLPVFDERIPTNQK
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHH
FAQKIKEIRP
HHHHHHHCCC
>Mature Secondary Structure 
PYPRKRVWIIGSVILAACVAVAGAGVAYTSGTSFCLSCHEMRVYQEEMHLSSHAADAKG
CCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
QPIGCSQCHIPSGNVVRMLGAKAWLGVKDLWVHTTEGGTDLDRAAMQPIARRFTDDANCR
CCCCCCCCCCCCCCCHHHHHHHHHCCHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCHH
ACHQDLARNAKNDGPVSEVGRLAHENYEGKNGQARSGCVGCHRNLAHLPVFDERIPTNQK
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHH
FAQKIKEIRP
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: trimethylamine-N-oxide; NADH [C]

Specific reaction: trimethylamine-N-oxide + NADH = H2O + trimethylamine + NAD [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]