| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is glnP [H]
Identifier: 220903865
GI number: 220903865
Start: 714892
End: 715692
Strand: Direct
Name: glnP [H]
Synonym: Ddes_0590
Alternate gene names: 220903865
Gene position: 714892-715692 (Clockwise)
Preceding gene: 220903864
Following gene: 220903866
Centisome position: 24.88
GC content: 53.68
Gene sequence:
>801_bases ATGCACGATAAAAAAGACGGAAGCAAGGGCAACATCATTATGGTCACGGAGGGGGCCTCCATCCCTGACCCCCGCGAATG GCGGCTCATCAATGCCTGGTCCATTGCCCTTGTCGGGGCCATTTCCACTCTGTTCGCCCTGTGCCTGCTCTGGCCCGAAC CCTATTTGCGCATTTTGCTCTATCTGCCGGACGGCGTTCTTATCACCTTCAAGATCACCGTTCTTTCCATCTGCTGTGCC GTACCTCTTGGCCTGCTCACCGGCCTCGGGCGTATTTCAAACAATCGCCTGATCAACCTTATTGCTTCCACCTATGTGGA AGTGATCCGCGGCATTCCTTTGCTGGTGCAGATTTTTTACATCTACTACGCGCTTTCACGTTTTGTGCAGGTCAGCGGCG TTACTTCCGCCGTGGTGGCCATCAGTTTTTGCTACGGCGCGTATATGGGCGAAGTATTTCGCGCGGGCATTACCGCCATC AACAAGGGGCAGAGCGAAGCTGCACGCTCGCTGGGCTTCAACGGCTTTCAGACCATGCGTTATGTGGTCCTGCCGCAGGC CATGCGCACCATTCTGCCGCCCGTGGGCAATGAATGCATAGCCATGCTCAAAGATACCTCGCTGGTGTCCATTATGGCTG TGCCCGATATCATGCAGCGTGCCAGAAGCTTTGTGGGAACCACCTATCTCTATTTTGAAACGTATACGGTGGTGGCTCTT CTGTATCTTGTCATCACGCTCATCCTTTCAAAAACCGTGAGCATCATGGAAGCCAGGCTGAACTATTATGACGGAAAGTA G
Upstream 100 bases:
>100_bases GATGGGCAAGGCCGACTAAACCGGACCAGCCATTATGGTTTCATGGGAGTCCGGGCCGTGCGGCCCGGACTCCGCAGCCG TATTGATCTGAAGGATTGTG
Downstream 100 bases:
>100_bases CACCACGGCCACGCAGGCCGCCCCTGCGCCCATCATTACCATCAGTAATGTATGGAAGTACTTCGGCTCGCTGCCCGCCC TGCAGGATGTGAGCCTGGAC
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MHDKKDGSKGNIIMVTEGASIPDPREWRLINAWSIALVGAISTLFALCLLWPEPYLRILLYLPDGVLITFKITVLSICCA VPLGLLTGLGRISNNRLINLIASTYVEVIRGIPLLVQIFYIYYALSRFVQVSGVTSAVVAISFCYGAYMGEVFRAGITAI NKGQSEAARSLGFNGFQTMRYVVLPQAMRTILPPVGNECIAMLKDTSLVSIMAVPDIMQRARSFVGTTYLYFETYTVVAL LYLVITLILSKTVSIMEARLNYYDGK
Sequences:
>Translated_266_residues MHDKKDGSKGNIIMVTEGASIPDPREWRLINAWSIALVGAISTLFALCLLWPEPYLRILLYLPDGVLITFKITVLSICCA VPLGLLTGLGRISNNRLINLIASTYVEVIRGIPLLVQIFYIYYALSRFVQVSGVTSAVVAISFCYGAYMGEVFRAGITAI NKGQSEAARSLGFNGFQTMRYVVLPQAMRTILPPVGNECIAMLKDTSLVSIMAVPDIMQRARSFVGTTYLYFETYTVVAL LYLVITLILSKTVSIMEARLNYYDGK >Mature_266_residues MHDKKDGSKGNIIMVTEGASIPDPREWRLINAWSIALVGAISTLFALCLLWPEPYLRILLYLPDGVLITFKITVLSICCA VPLGLLTGLGRISNNRLINLIASTYVEVIRGIPLLVQIFYIYYALSRFVQVSGVTSAVVAISFCYGAYMGEVFRAGITAI NKGQSEAARSLGFNGFQTMRYVVLPQAMRTILPPVGNECIAMLKDTSLVSIMAVPDIMQRARSFVGTTYLYFETYTVVAL LYLVITLILSKTVSIMEARLNYYDGK
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=220, Percent_Identity=35.4545454545455, Blast_Score=144, Evalue=4e-36, Organism=Escherichia coli, GI1788226, Length=207, Percent_Identity=34.7826086956522, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1788646, Length=208, Percent_Identity=33.1730769230769, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1786873, Length=208, Percent_Identity=34.1346153846154, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1788645, Length=222, Percent_Identity=32.8828828828829, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI87082239, Length=204, Percent_Identity=32.3529411764706, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI1787087, Length=224, Percent_Identity=27.2321428571429, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1786874, Length=209, Percent_Identity=26.3157894736842, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI48994930, Length=219, Percent_Identity=30.1369863013699, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=26.2910798122066, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29405; Mature: 29405
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDKKDGSKGNIIMVTEGASIPDPREWRLINAWSIALVGAISTLFALCLLWPEPYLRILL CCCCCCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHEEEE YLPDGVLITFKITVLSICCAVPLGLLTGLGRISNNRLINLIASTYVEVIRGIPLLVQIFY ECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH IYYALSRFVQVSGVTSAVVAISFCYGAYMGEVFRAGITAINKGQSEAARSLGFNGFQTMR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH YVVLPQAMRTILPPVGNECIAMLKDTSLVSIMAVPDIMQRARSFVGTTYLYFETYTVVAL HHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYLVITLILSKTVSIMEARLNYYDGK HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHDKKDGSKGNIIMVTEGASIPDPREWRLINAWSIALVGAISTLFALCLLWPEPYLRILL CCCCCCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHEEEE YLPDGVLITFKITVLSICCAVPLGLLTGLGRISNNRLINLIASTYVEVIRGIPLLVQIFY ECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH IYYALSRFVQVSGVTSAVVAISFCYGAYMGEVFRAGITAINKGQSEAARSLGFNGFQTMR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH YVVLPQAMRTILPPVGNECIAMLKDTSLVSIMAVPDIMQRARSFVGTTYLYFETYTVVAL HHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYLVITLILSKTVSIMEARLNYYDGK HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]