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The map label for this gene is fliS [H]

Identifier: 220903806

GI number: 220903806

Start: 637241

End: 637987

Strand: Reverse

Name: fliS [H]

Synonym: Ddes_0529

Alternate gene names: 220903806

Gene position: 637987-637241 (Counterclockwise)

Preceding gene: 220903807

Following gene: 220903805

Centisome position: 22.2

GC content: 63.32

Gene sequence:

>747_bases
ATGAACAAAGCGGCGCACGCCTACTTTCAGACCAAAATCGGCACCACTGACCAGGGGCAGCTTCTGCTCATGCTCTATGA
CGGCGCCCTCAAATACATCCAGCAGGCCCGCACCAAGATGATCGCCAAGGACTTTGCGGGCAAAGGCATCATGATTTCAA
AGGTTATCGACATCGTTAACGAACTTGCCGCATCACTCAATATGGACAGGGGCGGCAGTCTGGCCGTTAACCTCAACAAC
CTGTACCTGCTCTGCACAGCGCGCTTGCTGCGCGCCAACCTGAAAATGGATATGGAATCGCTCGACAGCGTGGAGAGCAT
TCTTTCAGGCCTGCGCGGGGCCTACGCCCAGATCATCGAAACCCCCGAGGCGCGCAAGGCCGCGGCAGATATTGCCAGCC
GCATGCAGCCCACCGGCTCGGTAACCAAAACAGCCCAGCCCCTCATGCAGCATCAGGGCATGCCGATTCCCCGCGCCCAG
GCTCAGGCTGCCTACGGGCGCAATGCCATGCCCTTCCAGCCGCAGGCCGCGGCGCAACCCGCCATTCCCGGCTATTCCCC
TGCACCGGCGGCTCCGGCTGCGGCAGCGGTCCCGGCAACCGGTGCCGATGCCAGTCAGCCCGCAGCAGCGCCCCGGGCGC
ATGTGCAGGCCTTTGACCAGGCCATGAGCCAGATGCCCCCTGCGGGCGCAGGCTTTGCGCCCGGCCGTCTGCCGGGCGCT
TACGGCAAAACCACGCCTCAGGAATAG

Upstream 100 bases:

>100_bases
AGCTTGAGTCACAGATTGCCAAGATGAACAACAGCAGCAAGAGCTAGCACGTTTCAAGCGCGGTACGCTATAAAAACACG
CACGCCACAAGGACAGAAAC

Downstream 100 bases:

>100_bases
GCTCCGGCGGGGCAGGTACTGCATCCAGGACATTTCACCTGTCCGGCAGGTGCAAAACAATGCTCCGCCGCAAGGACACA
AGGGCGGCAACGGCAACAGG

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNKAAHAYFQTKIGTTDQGQLLLMLYDGALKYIQQARTKMIAKDFAGKGIMISKVIDIVNELAASLNMDRGGSLAVNLNN
LYLLCTARLLRANLKMDMESLDSVESILSGLRGAYAQIIETPEARKAAADIASRMQPTGSVTKTAQPLMQHQGMPIPRAQ
AQAAYGRNAMPFQPQAAAQPAIPGYSPAPAAPAAAAVPATGADASQPAAAPRAHVQAFDQAMSQMPPAGAGFAPGRLPGA
YGKTTPQE

Sequences:

>Translated_248_residues
MNKAAHAYFQTKIGTTDQGQLLLMLYDGALKYIQQARTKMIAKDFAGKGIMISKVIDIVNELAASLNMDRGGSLAVNLNN
LYLLCTARLLRANLKMDMESLDSVESILSGLRGAYAQIIETPEARKAAADIASRMQPTGSVTKTAQPLMQHQGMPIPRAQ
AQAAYGRNAMPFQPQAAAQPAIPGYSPAPAAPAAAAVPATGADASQPAAAPRAHVQAFDQAMSQMPPAGAGFAPGRLPGA
YGKTTPQE
>Mature_248_residues
MNKAAHAYFQTKIGTTDQGQLLLMLYDGALKYIQQARTKMIAKDFAGKGIMISKVIDIVNELAASLNMDRGGSLAVNLNN
LYLLCTARLLRANLKMDMESLDSVESILSGLRGAYAQIIETPEARKAAADIASRMQPTGSVTKTAQPLMQHQGMPIPRAQ
AQAAYGRNAMPFQPQAAAQPAIPGYSPAPAAPAAAAVPATGADASQPAAAPRAHVQAFDQAMSQMPPAGAGFAPGRLPGA
YGKTTPQE

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=125, Percent_Identity=32, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 26004; Mature: 26004

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKAAHAYFQTKIGTTDQGQLLLMLYDGALKYIQQARTKMIAKDFAGKGIMISKVIDIVN
CCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ELAASLNMDRGGSLAVNLNNLYLLCTARLLRANLKMDMESLDSVESILSGLRGAYAQIIE
HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
TPEARKAAADIASRMQPTGSVTKTAQPLMQHQGMPIPRAQAQAAYGRNAMPFQPQAAAQP
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
AIPGYSPAPAAPAAAAVPATGADASQPAAAPRAHVQAFDQAMSQMPPAGAGFAPGRLPGA
CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
YGKTTPQE
CCCCCCCC
>Mature Secondary Structure
MNKAAHAYFQTKIGTTDQGQLLLMLYDGALKYIQQARTKMIAKDFAGKGIMISKVIDIVN
CCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ELAASLNMDRGGSLAVNLNNLYLLCTARLLRANLKMDMESLDSVESILSGLRGAYAQIIE
HHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
TPEARKAAADIASRMQPTGSVTKTAQPLMQHQGMPIPRAQAQAAYGRNAMPFQPQAAAQP
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
AIPGYSPAPAAPAAAAVPATGADASQPAAAPRAHVQAFDQAMSQMPPAGAGFAPGRLPGA
CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
YGKTTPQE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609 [H]