| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is crp [C]
Identifier: 220903805
GI number: 220903805
Start: 636186
End: 636920
Strand: Reverse
Name: crp [C]
Synonym: Ddes_0528
Alternate gene names: 220903805
Gene position: 636920-636186 (Counterclockwise)
Preceding gene: 220903806
Following gene: 220903804
Centisome position: 22.17
GC content: 60.68
Gene sequence:
>735_bases ATGACAAACCGACAATATGCCGCCAACACGGATTCTCTTATGAACGAAGAAAGCCTGCAAGCCGCCCCCACCGTGGCCGA TGCCCTGTGTACCGGCCTGCTGGCGGGCCTGAACCATCACGAAAGGGATGTGCTTGCCCGGCACGCCCGCCTGCAAAGCT TTGCTCCCGGCGTGGCGCTTTTTCAGGAAGGCGACGAAAGCGCAGACGCCATGCTGCTGCTTTCTGGTCTGGTCAAACTG TGCCGCCACAGCAGCCAGGGCAAGGAATGTGTACTCCACCTCGTGCATTCCGGCAAATTTATCGACGCGGGCGTACTTTT TTATGAGGGGGGGCTGCCCATTTCAGCCGTGGCTCTGCAGCACACCACCGTGCTGAGCCTGAACAGGCGCGCGTTTCTGC ACACCCTTGAAAACAATGCTCCGCTGGCCGTCAGCCTTCTGGGGGCCATGAGCCTGCGCCAGCGCCTGCTTATTACCAAA ATTGCCGGTTCACAGGGGCGCATATCCGTGGCCGGGCGCGTGGCCGCATGGCTTTTGCACCGGGCAAAAATGGAAAAGAG CGCCACACTGCGCCTTGGTGTTACACAAGAAATTCTGGCCCGCCTCATGGGCATCAGCCGGGAGAGCCTCAGCCGCGAAC TTTCGGCCCTTTCGGCCGCAGGCATCATAGAGCATCAGCGGCGCAGCATCACCCTGCTGGACCACGAAGCCCTGAAACTG CGGGCGCAAGGCTAG
Upstream 100 bases:
>100_bases CACTGCCGCTGCCGCGCGCGTACACCGGAAGGTTTCGGCTGCTGCCGTACCGCCTCCGAAGTCCGGCATTCCTGAAGCCG AAAGCCCGGGAGATTGTACT
Downstream 100 bases:
>100_bases AGCTGTTCATGCGCGCGGCAAGCGCCGGGGCAACGGCCTTCACACCGCGAAACAACATTTTTTCAAAGCTGAAAATCCGT AAAGGGCAACTATGCGCGTC
Product: Crp/Fnr family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; DnrE Protein; Transcription Regulator
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTNRQYAANTDSLMNEESLQAAPTVADALCTGLLAGLNHHERDVLARHARLQSFAPGVALFQEGDESADAMLLLSGLVKL CRHSSQGKECVLHLVHSGKFIDAGVLFYEGGLPISAVALQHTTVLSLNRRAFLHTLENNAPLAVSLLGAMSLRQRLLITK IAGSQGRISVAGRVAAWLLHRAKMEKSATLRLGVTQEILARLMGISRESLSRELSALSAAGIIEHQRRSITLLDHEALKL RAQG
Sequences:
>Translated_244_residues MTNRQYAANTDSLMNEESLQAAPTVADALCTGLLAGLNHHERDVLARHARLQSFAPGVALFQEGDESADAMLLLSGLVKL CRHSSQGKECVLHLVHSGKFIDAGVLFYEGGLPISAVALQHTTVLSLNRRAFLHTLENNAPLAVSLLGAMSLRQRLLITK IAGSQGRISVAGRVAAWLLHRAKMEKSATLRLGVTQEILARLMGISRESLSRELSALSAAGIIEHQRRSITLLDHEALKL RAQG >Mature_243_residues TNRQYAANTDSLMNEESLQAAPTVADALCTGLLAGLNHHERDVLARHARLQSFAPGVALFQEGDESADAMLLLSGLVKLC RHSSQGKECVLHLVHSGKFIDAGVLFYEGGLPISAVALQHTTVLSLNRRAFLHTLENNAPLAVSLLGAMSLRQRLLITKI AGSQGRISVAGRVAAWLLHRAKMEKSATLRLGVTQEILARLMGISRESLSRELSALSAAGIIEHQRRSITLLDHEALKLR AQG
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26362; Mature: 26231
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRQYAANTDSLMNEESLQAAPTVADALCTGLLAGLNHHERDVLARHARLQSFAPGVAL CCCCCCCCCCHHHHCHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH FQEGDESADAMLLLSGLVKLCRHSSQGKECVLHLVHSGKFIDAGVLFYEGGLPISAVALQ HHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEEECCCCHHHHHHH HTTVLSLNRRAFLHTLENNAPLAVSLLGAMSLRQRLLITKIAGSQGRISVAGRVAAWLLH HHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHH RAKMEKSATLRLGVTQEILARLMGISRESLSRELSALSAAGIIEHQRRSITLLDHEALKL HHHHCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHEE RAQG ECCC >Mature Secondary Structure TNRQYAANTDSLMNEESLQAAPTVADALCTGLLAGLNHHERDVLARHARLQSFAPGVAL CCCCCCCCCHHHHCHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH FQEGDESADAMLLLSGLVKLCRHSSQGKECVLHLVHSGKFIDAGVLFYEGGLPISAVALQ HHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEEECCCCHHHHHHH HTTVLSLNRRAFLHTLENNAPLAVSLLGAMSLRQRLLITKIAGSQGRISVAGRVAAWLLH HHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHH RAKMEKSATLRLGVTQEILARLMGISRESLSRELSALSAAGIIEHQRRSITLLDHEALKL HHHHCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHEE RAQG ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA