| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903778
Identifier: 220903778
GI number: 220903778
Start: 608183
End: 609355
Strand: Reverse
Name: 220903778
Synonym: Ddes_0501
Alternate gene names: NA
Gene position: 609355-608183 (Counterclockwise)
Preceding gene: 220903779
Following gene: 220903777
Centisome position: 21.21
GC content: 64.45
Gene sequence:
>1173_bases ATGGATCCCATTACCCATGCCGCCAGCGGCGCTGTGGCCATGCTGGCCATGCCGCGCCGCCCCGCCACCCGGTGGGCCAT ACCGCTGGCCGCCCTTGCGGCAGCCTCGCCTGACATAGATGTGATCTTTTGCCACACCCCCCTGCAATTCCTGCTGCTAC ACCGGGGCATCACGCATTCACTGGCGGCGGCCCCGCTGATGGGCCTGCTGCTGGCCTTGCTGTCGCGACCCCTGTGGCGG GCGCACACGCCGGAACACTGGGACTTTGCCAAAGTCTGGCTATTCATGGTCTGCATGGTACTGCTGCATATCTGGCTGGA TGTCATCACCACCTACGGAACCATGATATATCTGCCATTCTCGCATGAAAGGGTACGCCTTAATGCGGTCTTTATCATAG ACCTGCTGCTGACCCTGCCCCTGCTCTGGGCCGTCTTGCGGTGGCGCGGGCGGCGTGGCCTTATGAGGCTGGCCCTGGCC TGGGTTATTGTTTACCCGGCCCTGTGCATCGGGCTCAACGCATGGCACACGACACAGGCCGAACAGCGGCTGATCGCGGA AGGCCGCGCAGCAAGCCGGATTGTAGTGCTGCCCGACGGCTTCGCCCCCCTGTTCTGGCGCACCATTTATGAAGAGGACG GCCCCCAGGGCCGCATTGTCTACAGCCAGGGGCTTGATGCCCTGGGCCGCCCTCACGACGCGCCGGTTCCCCACAAGGCC GCGCCGCCGGAGCTTGTGGCTGCACTGGCCCGCCAGTCCGTGGCGGCGGATGCCTTTTTCGACTTTACCCTGCTGCCCGT CATGCGTCCGCTGCCTGCCGATGACATGCCGCCCGGCGCTCCCGGCACCCGGGCCGCTGGCAGCGCAGTCCCTGAAACTT CAGGGCGTACCACATACATGCTTTTTCATGACCTGCGCTTCGGCAGCAGCCTGAAGCTGGTGCGCGCCGCCATGGCCAGT CGCCCCAATGCGGATATTCCCTTCCGGTACATGGCGGAACTGGAAATGCCCGCTGCAAAAAAAGACGGTACGCCGGAGGC GGAAGTACCGCCTGAAGTGCATCTTCTGCTTGAGCGTCTGCGCTTTTCCGACAGCGGCAAGGATTCACACTGGCAGCCCC CCCAGCCGCCCGCTTCACCCGGGATTCTAGACTGGCTGGCCGGGCTGCGCTGA
Upstream 100 bases:
>100_bases GCAATTCAACCGTGCGCATGGCCTTGACCGCGACCAGAACCCGGAACACCCGGAATACAGGGCCGTTCCCAAACAACGCA GCCCTTTCAAGCAATAGCCT
Downstream 100 bases:
>100_bases GGCTACCCCGCCGGGCGGCCACAATCGCCCATACACGTTACAACAATGCCGACGAGGTGTTTATGAACAGCAGTTTTTCG CATCTGGATGGGCAGGGCAA
Product: membrane-bound metal-dependent hydrolase
Products: NA
Alternate protein names: Membrane-Bound Metal-Dependent Hydrolase
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MDPITHAASGAVAMLAMPRRPATRWAIPLAALAAASPDIDVIFCHTPLQFLLLHRGITHSLAAAPLMGLLLALLSRPLWR AHTPEHWDFAKVWLFMVCMVLLHIWLDVITTYGTMIYLPFSHERVRLNAVFIIDLLLTLPLLWAVLRWRGRRGLMRLALA WVIVYPALCIGLNAWHTTQAEQRLIAEGRAASRIVVLPDGFAPLFWRTIYEEDGPQGRIVYSQGLDALGRPHDAPVPHKA APPELVAALARQSVAADAFFDFTLLPVMRPLPADDMPPGAPGTRAAGSAVPETSGRTTYMLFHDLRFGSSLKLVRAAMAS RPNADIPFRYMAELEMPAAKKDGTPEAEVPPEVHLLLERLRFSDSGKDSHWQPPQPPASPGILDWLAGLR
Sequences:
>Translated_390_residues MDPITHAASGAVAMLAMPRRPATRWAIPLAALAAASPDIDVIFCHTPLQFLLLHRGITHSLAAAPLMGLLLALLSRPLWR AHTPEHWDFAKVWLFMVCMVLLHIWLDVITTYGTMIYLPFSHERVRLNAVFIIDLLLTLPLLWAVLRWRGRRGLMRLALA WVIVYPALCIGLNAWHTTQAEQRLIAEGRAASRIVVLPDGFAPLFWRTIYEEDGPQGRIVYSQGLDALGRPHDAPVPHKA APPELVAALARQSVAADAFFDFTLLPVMRPLPADDMPPGAPGTRAAGSAVPETSGRTTYMLFHDLRFGSSLKLVRAAMAS RPNADIPFRYMAELEMPAAKKDGTPEAEVPPEVHLLLERLRFSDSGKDSHWQPPQPPASPGILDWLAGLR >Mature_390_residues MDPITHAASGAVAMLAMPRRPATRWAIPLAALAAASPDIDVIFCHTPLQFLLLHRGITHSLAAAPLMGLLLALLSRPLWR AHTPEHWDFAKVWLFMVCMVLLHIWLDVITTYGTMIYLPFSHERVRLNAVFIIDLLLTLPLLWAVLRWRGRRGLMRLALA WVIVYPALCIGLNAWHTTQAEQRLIAEGRAASRIVVLPDGFAPLFWRTIYEEDGPQGRIVYSQGLDALGRPHDAPVPHKA APPELVAALARQSVAADAFFDFTLLPVMRPLPADDMPPGAPGTRAAGSAVPETSGRTTYMLFHDLRFGSSLKLVRAAMAS RPNADIPFRYMAELEMPAAKKDGTPEAEVPPEVHLLLERLRFSDSGKDSHWQPPQPPASPGILDWLAGLR
Specific function: Unknown
COG id: COG1988
COG function: function code R; Predicted membrane-bound metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43126; Mature: 43126
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPITHAASGAVAMLAMPRRPATRWAIPLAALAAASPDIDVIFCHTPLQFLLLHRGITHS CCCCCHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCHHHH LAAAPLMGLLLALLSRPLWRAHTPEHWDFAKVWLFMVCMVLLHIWLDVITTYGTMIYLPF HHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC SHERVRLNAVFIIDLLLTLPLLWAVLRWRGRRGLMRLALAWVIVYPALCIGLNAWHTTQA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHH EQRLIAEGRAASRIVVLPDGFAPLFWRTIYEEDGPQGRIVYSQGLDALGRPHDAPVPHKA HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEECCCCCHHHCCCCCCCCCCCC APPELVAALARQSVAADAFFDFTLLPVMRPLPADDMPPGAPGTRAAGSAVPETSGRTTYM CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE LFHDLRFGSSLKLVRAAMASRPNADIPFRYMAELEMPAAKKDGTPEAEVPPEVHLLLERL EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH RFSDSGKDSHWQPPQPPASPGILDWLAGLR HCCCCCCCCCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MDPITHAASGAVAMLAMPRRPATRWAIPLAALAAASPDIDVIFCHTPLQFLLLHRGITHS CCCCCHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCHHHH LAAAPLMGLLLALLSRPLWRAHTPEHWDFAKVWLFMVCMVLLHIWLDVITTYGTMIYLPF HHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC SHERVRLNAVFIIDLLLTLPLLWAVLRWRGRRGLMRLALAWVIVYPALCIGLNAWHTTQA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHH EQRLIAEGRAASRIVVLPDGFAPLFWRTIYEEDGPQGRIVYSQGLDALGRPHDAPVPHKA HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEECCCCCHHHCCCCCCCCCCCC APPELVAALARQSVAADAFFDFTLLPVMRPLPADDMPPGAPGTRAAGSAVPETSGRTTYM CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE LFHDLRFGSSLKLVRAAMASRPNADIPFRYMAELEMPAAKKDGTPEAEVPPEVHLLLERL EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH RFSDSGKDSHWQPPQPPASPGILDWLAGLR HCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA