Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220903778

Identifier: 220903778

GI number: 220903778

Start: 608183

End: 609355

Strand: Reverse

Name: 220903778

Synonym: Ddes_0501

Alternate gene names: NA

Gene position: 609355-608183 (Counterclockwise)

Preceding gene: 220903779

Following gene: 220903777

Centisome position: 21.21

GC content: 64.45

Gene sequence:

>1173_bases
ATGGATCCCATTACCCATGCCGCCAGCGGCGCTGTGGCCATGCTGGCCATGCCGCGCCGCCCCGCCACCCGGTGGGCCAT
ACCGCTGGCCGCCCTTGCGGCAGCCTCGCCTGACATAGATGTGATCTTTTGCCACACCCCCCTGCAATTCCTGCTGCTAC
ACCGGGGCATCACGCATTCACTGGCGGCGGCCCCGCTGATGGGCCTGCTGCTGGCCTTGCTGTCGCGACCCCTGTGGCGG
GCGCACACGCCGGAACACTGGGACTTTGCCAAAGTCTGGCTATTCATGGTCTGCATGGTACTGCTGCATATCTGGCTGGA
TGTCATCACCACCTACGGAACCATGATATATCTGCCATTCTCGCATGAAAGGGTACGCCTTAATGCGGTCTTTATCATAG
ACCTGCTGCTGACCCTGCCCCTGCTCTGGGCCGTCTTGCGGTGGCGCGGGCGGCGTGGCCTTATGAGGCTGGCCCTGGCC
TGGGTTATTGTTTACCCGGCCCTGTGCATCGGGCTCAACGCATGGCACACGACACAGGCCGAACAGCGGCTGATCGCGGA
AGGCCGCGCAGCAAGCCGGATTGTAGTGCTGCCCGACGGCTTCGCCCCCCTGTTCTGGCGCACCATTTATGAAGAGGACG
GCCCCCAGGGCCGCATTGTCTACAGCCAGGGGCTTGATGCCCTGGGCCGCCCTCACGACGCGCCGGTTCCCCACAAGGCC
GCGCCGCCGGAGCTTGTGGCTGCACTGGCCCGCCAGTCCGTGGCGGCGGATGCCTTTTTCGACTTTACCCTGCTGCCCGT
CATGCGTCCGCTGCCTGCCGATGACATGCCGCCCGGCGCTCCCGGCACCCGGGCCGCTGGCAGCGCAGTCCCTGAAACTT
CAGGGCGTACCACATACATGCTTTTTCATGACCTGCGCTTCGGCAGCAGCCTGAAGCTGGTGCGCGCCGCCATGGCCAGT
CGCCCCAATGCGGATATTCCCTTCCGGTACATGGCGGAACTGGAAATGCCCGCTGCAAAAAAAGACGGTACGCCGGAGGC
GGAAGTACCGCCTGAAGTGCATCTTCTGCTTGAGCGTCTGCGCTTTTCCGACAGCGGCAAGGATTCACACTGGCAGCCCC
CCCAGCCGCCCGCTTCACCCGGGATTCTAGACTGGCTGGCCGGGCTGCGCTGA

Upstream 100 bases:

>100_bases
GCAATTCAACCGTGCGCATGGCCTTGACCGCGACCAGAACCCGGAACACCCGGAATACAGGGCCGTTCCCAAACAACGCA
GCCCTTTCAAGCAATAGCCT

Downstream 100 bases:

>100_bases
GGCTACCCCGCCGGGCGGCCACAATCGCCCATACACGTTACAACAATGCCGACGAGGTGTTTATGAACAGCAGTTTTTCG
CATCTGGATGGGCAGGGCAA

Product: membrane-bound metal-dependent hydrolase

Products: NA

Alternate protein names: Membrane-Bound Metal-Dependent Hydrolase

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MDPITHAASGAVAMLAMPRRPATRWAIPLAALAAASPDIDVIFCHTPLQFLLLHRGITHSLAAAPLMGLLLALLSRPLWR
AHTPEHWDFAKVWLFMVCMVLLHIWLDVITTYGTMIYLPFSHERVRLNAVFIIDLLLTLPLLWAVLRWRGRRGLMRLALA
WVIVYPALCIGLNAWHTTQAEQRLIAEGRAASRIVVLPDGFAPLFWRTIYEEDGPQGRIVYSQGLDALGRPHDAPVPHKA
APPELVAALARQSVAADAFFDFTLLPVMRPLPADDMPPGAPGTRAAGSAVPETSGRTTYMLFHDLRFGSSLKLVRAAMAS
RPNADIPFRYMAELEMPAAKKDGTPEAEVPPEVHLLLERLRFSDSGKDSHWQPPQPPASPGILDWLAGLR

Sequences:

>Translated_390_residues
MDPITHAASGAVAMLAMPRRPATRWAIPLAALAAASPDIDVIFCHTPLQFLLLHRGITHSLAAAPLMGLLLALLSRPLWR
AHTPEHWDFAKVWLFMVCMVLLHIWLDVITTYGTMIYLPFSHERVRLNAVFIIDLLLTLPLLWAVLRWRGRRGLMRLALA
WVIVYPALCIGLNAWHTTQAEQRLIAEGRAASRIVVLPDGFAPLFWRTIYEEDGPQGRIVYSQGLDALGRPHDAPVPHKA
APPELVAALARQSVAADAFFDFTLLPVMRPLPADDMPPGAPGTRAAGSAVPETSGRTTYMLFHDLRFGSSLKLVRAAMAS
RPNADIPFRYMAELEMPAAKKDGTPEAEVPPEVHLLLERLRFSDSGKDSHWQPPQPPASPGILDWLAGLR
>Mature_390_residues
MDPITHAASGAVAMLAMPRRPATRWAIPLAALAAASPDIDVIFCHTPLQFLLLHRGITHSLAAAPLMGLLLALLSRPLWR
AHTPEHWDFAKVWLFMVCMVLLHIWLDVITTYGTMIYLPFSHERVRLNAVFIIDLLLTLPLLWAVLRWRGRRGLMRLALA
WVIVYPALCIGLNAWHTTQAEQRLIAEGRAASRIVVLPDGFAPLFWRTIYEEDGPQGRIVYSQGLDALGRPHDAPVPHKA
APPELVAALARQSVAADAFFDFTLLPVMRPLPADDMPPGAPGTRAAGSAVPETSGRTTYMLFHDLRFGSSLKLVRAAMAS
RPNADIPFRYMAELEMPAAKKDGTPEAEVPPEVHLLLERLRFSDSGKDSHWQPPQPPASPGILDWLAGLR

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43126; Mature: 43126

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPITHAASGAVAMLAMPRRPATRWAIPLAALAAASPDIDVIFCHTPLQFLLLHRGITHS
CCCCCHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCHHHH
LAAAPLMGLLLALLSRPLWRAHTPEHWDFAKVWLFMVCMVLLHIWLDVITTYGTMIYLPF
HHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
SHERVRLNAVFIIDLLLTLPLLWAVLRWRGRRGLMRLALAWVIVYPALCIGLNAWHTTQA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHH
EQRLIAEGRAASRIVVLPDGFAPLFWRTIYEEDGPQGRIVYSQGLDALGRPHDAPVPHKA
HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEECCCCCHHHCCCCCCCCCCCC
APPELVAALARQSVAADAFFDFTLLPVMRPLPADDMPPGAPGTRAAGSAVPETSGRTTYM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LFHDLRFGSSLKLVRAAMASRPNADIPFRYMAELEMPAAKKDGTPEAEVPPEVHLLLERL
EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
RFSDSGKDSHWQPPQPPASPGILDWLAGLR
HCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MDPITHAASGAVAMLAMPRRPATRWAIPLAALAAASPDIDVIFCHTPLQFLLLHRGITHS
CCCCCHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCHHHH
LAAAPLMGLLLALLSRPLWRAHTPEHWDFAKVWLFMVCMVLLHIWLDVITTYGTMIYLPF
HHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
SHERVRLNAVFIIDLLLTLPLLWAVLRWRGRRGLMRLALAWVIVYPALCIGLNAWHTTQA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHCCHH
EQRLIAEGRAASRIVVLPDGFAPLFWRTIYEEDGPQGRIVYSQGLDALGRPHDAPVPHKA
HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEECCCCCHHHCCCCCCCCCCCC
APPELVAALARQSVAADAFFDFTLLPVMRPLPADDMPPGAPGTRAAGSAVPETSGRTTYM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LFHDLRFGSSLKLVRAAMASRPNADIPFRYMAELEMPAAKKDGTPEAEVPPEVHLLLERL
EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
RFSDSGKDSHWQPPQPPASPGILDWLAGLR
HCCCCCCCCCCCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA