| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903755
Identifier: 220903755
GI number: 220903755
Start: 585383
End: 586459
Strand: Reverse
Name: 220903755
Synonym: Ddes_0477
Alternate gene names: NA
Gene position: 586459-585383 (Counterclockwise)
Preceding gene: 220903756
Following gene: 220903749
Centisome position: 20.41
GC content: 56.73
Gene sequence:
>1077_bases ATGAGCAGGCTTCGGATCGTCCAGTACGGTTGCGGAAAAATGTCACGATATTCAATGCGTTATGTATACGAAAAAGGCGC CGAGATCGTCGCCGCTTTTGATATGAATCCTGCGGTGATCGGCCGTGATATCGGCTCCATCATGGGGTGCGAAAACAAGG GCGTTATTGTTCAGGACGCATCCCAGGCAGAAAAGGTGCTGGCCCAGGTCAAGCCCGATGCCTGCCTCATCACCACCATG AGCCTTATCCGCGATGTCAGGGGCGCACTTATGGCCTGCGCCCGTAGCGGCGTCAACGCCATCACCATCTGCGAAGAGGC CATCTTTCCCGCCAATTCTTCACCGGCCATTACCCGCGAGCTGGACGAAGCCGCCAAAAAGACCGGCTGCACCATATGCG GCACGGGCTACCAGGACGTCTTCTGGGGAAACCTTATCGCCACGTTGGCCGGAGCCATGCACACCATTAAAAAAATCCGC GGCAAATCCAGCTATAATGTGGAAGATTACGGCATTGCCCTTGCCAAGGCGCATGGGGCAGGGCTGGACCTTGCCGCCTT TGAAAAAGAGATCGCTGCGGCCGACAATATCCCGGAAGCCGAACGTGCCGCCCTTATTGAAAAAGGCGATTTCCTGCCTT CCTATATGTGGAACGTCAACGGCTGGCTGGCGGCGCGCCTGGGCCTTACGGTAAAAAGCCAGGTACAGAAATGCGTACCC ATGACCCACTCCGCCGAACTGAAATCCGAAACCCTGGGCATGACTATTCCTGCCGGACACGCCACGGGCATGTCGGCGGT TGTCACCACCGAAACACATGAAGGCATCACCATTGAAAGCGAATGCATAGGCAAGGTCTATGCTCCCGATGAGGTGGACC GCAACGACTGGACCCTTGTGGGCGAGCCGGACACCCAGGTGGTCATCACCCGGCCCTCTACTGTTGAACTGACCTGCGCC ACACTGGTGAACCGCATCCCCGACCTCATCAATGCCGCCCCCGGGTACGTGACCACAGACCAGATGCCCGTAAACAGCTA TCGGGTAAAGCCGCTGGACTATTACGTCAAAAAATAA
Upstream 100 bases:
>100_bases CACGCCATCACGCACGCTTGATTTTTCACAAAGAGCGCGTACACTCTTATTGAAATTGATTTTCAATCTAAATCAACCCT TTCCAAACCAGGAGGAATCC
Downstream 100 bases:
>100_bases ACTGCCGGAACCTGCACACAGCAAGCCCCGCCCTTTCTGAAAGGACGGGGCTTGCTGCAAAAAAGCGCAGGGTAAAAAAT GTCGGATTGTGCGCCGTGGC
Product: dihydrodipicolinate reductase
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Oxidoreductase; Oxidoreductase Domain Protein; Ypothetical Protein SMU.
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSRLRIVQYGCGKMSRYSMRYVYEKGAEIVAAFDMNPAVIGRDIGSIMGCENKGVIVQDASQAEKVLAQVKPDACLITTM SLIRDVRGALMACARSGVNAITICEEAIFPANSSPAITRELDEAAKKTGCTICGTGYQDVFWGNLIATLAGAMHTIKKIR GKSSYNVEDYGIALAKAHGAGLDLAAFEKEIAAADNIPEAERAALIEKGDFLPSYMWNVNGWLAARLGLTVKSQVQKCVP MTHSAELKSETLGMTIPAGHATGMSAVVTTETHEGITIESECIGKVYAPDEVDRNDWTLVGEPDTQVVITRPSTVELTCA TLVNRIPDLINAAPGYVTTDQMPVNSYRVKPLDYYVKK
Sequences:
>Translated_358_residues MSRLRIVQYGCGKMSRYSMRYVYEKGAEIVAAFDMNPAVIGRDIGSIMGCENKGVIVQDASQAEKVLAQVKPDACLITTM SLIRDVRGALMACARSGVNAITICEEAIFPANSSPAITRELDEAAKKTGCTICGTGYQDVFWGNLIATLAGAMHTIKKIR GKSSYNVEDYGIALAKAHGAGLDLAAFEKEIAAADNIPEAERAALIEKGDFLPSYMWNVNGWLAARLGLTVKSQVQKCVP MTHSAELKSETLGMTIPAGHATGMSAVVTTETHEGITIESECIGKVYAPDEVDRNDWTLVGEPDTQVVITRPSTVELTCA TLVNRIPDLINAAPGYVTTDQMPVNSYRVKPLDYYVKK >Mature_357_residues SRLRIVQYGCGKMSRYSMRYVYEKGAEIVAAFDMNPAVIGRDIGSIMGCENKGVIVQDASQAEKVLAQVKPDACLITTMS LIRDVRGALMACARSGVNAITICEEAIFPANSSPAITRELDEAAKKTGCTICGTGYQDVFWGNLIATLAGAMHTIKKIRG KSSYNVEDYGIALAKAHGAGLDLAAFEKEIAAADNIPEAERAALIEKGDFLPSYMWNVNGWLAARLGLTVKSQVQKCVPM THSAELKSETLGMTIPAGHATGMSAVVTTETHEGITIESECIGKVYAPDEVDRNDWTLVGEPDTQVVITRPSTVELTCAT LVNRIPDLINAAPGYVTTDQMPVNSYRVKPLDYYVKK
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38639; Mature: 38508
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLRIVQYGCGKMSRYSMRYVYEKGAEIVAAFDMNPAVIGRDIGSIMGCENKGVIVQDA CCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECH SQAEKVLAQVKPDACLITTMSLIRDVRGALMACARSGVNAITICEEAIFPANSSPAITRE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCHHHHH LDEAAKKTGCTICGTGYQDVFWGNLIATLAGAMHTIKKIRGKSSYNVEDYGIALAKAHGA HHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCEEEEECCCC GLDLAAFEKEIAAADNIPEAERAALIEKGDFLPSYMWNVNGWLAARLGLTVKSQVQKCVP CCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEEEHHCCHHHHHHHHHCC MTHSAELKSETLGMTIPAGHATGMSAVVTTETHEGITIESECIGKVYAPDEVDRNDWTLV CCCCCHHHHHHCCEEECCCCCCCCEEEEEECCCCCEEECHHHCCEECCCCCCCCCCCEEE GEPDTQVVITRPSTVELTCATLVNRIPDLINAAPGYVTTDQMPVNSYRVKPLDYYVKK ECCCCEEEEECCCCEEEEHHHHHHHHHHHHHCCCCCEECCCCCCCCEECCHHHHEECC >Mature Secondary Structure SRLRIVQYGCGKMSRYSMRYVYEKGAEIVAAFDMNPAVIGRDIGSIMGCENKGVIVQDA CCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECH SQAEKVLAQVKPDACLITTMSLIRDVRGALMACARSGVNAITICEEAIFPANSSPAITRE HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCHHHHH LDEAAKKTGCTICGTGYQDVFWGNLIATLAGAMHTIKKIRGKSSYNVEDYGIALAKAHGA HHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCEEEEECCCC GLDLAAFEKEIAAADNIPEAERAALIEKGDFLPSYMWNVNGWLAARLGLTVKSQVQKCVP CCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEEEHHCCHHHHHHHHHCC MTHSAELKSETLGMTIPAGHATGMSAVVTTETHEGITIESECIGKVYAPDEVDRNDWTLV CCCCCHHHHHHCCEEECCCCCCCCEEEEEECCCCCEEECHHHCCEECCCCCCCCCCCEEE GEPDTQVVITRPSTVELTCATLVNRIPDLINAAPGYVTTDQMPVNSYRVKPLDYYVKK ECCCCEEEEECCCCEEEEHHHHHHHHHHHHHCCCCCEECCCCCCCCEECCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA