| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903712
Identifier: 220903712
GI number: 220903712
Start: 525615
End: 527510
Strand: Reverse
Name: 220903712
Synonym: Ddes_0434
Alternate gene names: NA
Gene position: 527510-525615 (Counterclockwise)
Preceding gene: 220903717
Following gene: 220903707
Centisome position: 18.36
GC content: 57.38
Gene sequence:
>1896_bases ATGCCAGCTTACGCCGTTCTGCGTATCCAAAAGCTCAAGTCCTGGGGCGACATCGCCGGATCGGACGCTCACAACTACCG GGAGCGTGAAACACCCAATGCGGACGCCGAGCGCACTCCGGACAACTCCACCTTTGCCGGCAACCCTGAGCAAGATTCCG TGGCAGCCATCAAAGCCGCCATCGGCAATCAGAACATCCGCAAGAATGCCGTGCTGGCCGTGGAAATGCTTTTGAGTGCC AGCCCCGAACACTTCCGGCCCGACGACAAGAGCAAGGCGGGCAGCTATGACCTTTCCCGCGCATGGGAATGGGCGGAAAC ATCCGCTCAATGGCTGCGTGAGCGTTACGGCAACCGGGTTATCAAAGCTGTCATGCATCTGGACGAAGCCACGCCGCACA TGCACGCCACCATTGTTCCCCTGGACGATAAAGGCAAACTGAACTGCCGCGCCCTGTTTGGTGGAACCCGGCACACGCTT ACTGACCTTCAGACCGACTACGCCAAAGCGGTTGAAAAGCTTGGCATTGAGCGCGGCTTGCAGGGCAGCTGGGCAAAGCA TCAAGACGTTGCCAAGTTCTACGCCATCACCCAGAACCAAGAGCACCCCGCAGTGCCCCGCGCAAAGGGCGTTGACATTC CCCCTCTGCCCGGACGTGTGGAGCGCCTTTCTGATTCGGTGCTGACCCGCTTTGCTCAGGAAGTGGCGGCTTCTGCCATT GATGCCCAACAAGATAAAACAGTTCCTGCCTTGCAGATGCTTACCGGAGAAAATGCCATGCTGAAAAAGCAGACCGAGGA CTTACGCCGCAGCAATGCCGCGCTCAGTCAGGAACGCGATCGCCTGAAGCGTGAAGCGGATCAGCTGCGTGGCTGGCCCC TGCCTGAAGTGTTGACGCAGCTATACGGCGCTCGTGAAGCCTCAGACAGCAAGGCCAGCTATAAGAGCCGTAAGTTTGAA TTGCCCGATGGAACAAAAATAGGCGTTACTGATGACCTTTGGCATGATAATACAAACAATGTGGGCAAGAAGGGAGCTAT CAACCTTGTTATGCACCTTTCAGGCTATGGTCAGGAGCAGTATAAACAGGCTGTGCGCGACCTTGCGGACGCTTTCGGCT CTGACGCAGCCAACCGGGCTGTTTCGCGCCATATCATCAACACCGCCCCCAAACAGGCCGAGCGCATCACTCTTGAATCC ATCAAGGAGCCTGCACAGCTTCCGCAGCCTTGCCCGGAGACATGGCAGCGGGTGCGCGGCTATCTGACCAAGGAGCGCAA ACTACCCGGCAAACTCATTGATGCCGTCCACTGCCAAGGGCTTGTGTACAGTGACCAGCGGACAAACTGCGTCTTTCCGT GTGACAAAGAGAGCGGTGCCTTTCTGCGCGGCTCAGGCAAACAGCCCTTCAAGCGGACTATGGGGCAGGGGCATTTGCCG TTCCACCTGAAAGGAGAAGACAGTAAAGTTATGGTAGCGGAAAGCGCCATTGATGCGCTTTCGCTCAAGGCCCTGTACCC GGCAAGCTCGGTCATTGCTACAGGCGGCAACATGCCGCCGGAACGGCTGAAGCCCTATCTTAATGGCAAAGAGGTGTACC TTGCCCATGATGCGGATAAGGCAGGGGAAGCCCAGGCCGCCCGCATTCAGGAGCACTACCCGGAGGCAAAACGCCTATGC CCCCACGGGGCAAAGATTGGAATGAATATTTGCAGAAAAAGCAGGAACGGGAAATACAGCCTGAGCGGCAACGGCAAGTG GATATGGAACGCTGAATGCCCTTACTCGCTCCCTTCCGGCAGTTGCGGAATATCGGCCTCAACCCGTCCGATCAGTTCCG CCGCCGTCATGCCCAACGCCTCTGAAATCAATACCAAGGACGCCAGCGAAGGCTGA
Upstream 100 bases:
>100_bases CGGGTTTGCTGAAAGGTGAAATCCCCGCCTGTTATAGACAGATGATTACTCATCTTTACGCAACAGGCAGTGAAAGGCAA CCAGTAGGAAAAGAAAAATA
Downstream 100 bases:
>100_bases TTTTTCTGCCGCTCCAAAAGCGAAATGGCGGAACGATCCATGCCGCATTGCGCCGCAAGCTGTTCCTGAGACAGCCCTGC CTCTACGCGCAATGTGCGTA
Product: plasmid recombination protein
Products: NA
Alternate protein names: ORF 1 [H]
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MPAYAVLRIQKLKSWGDIAGSDAHNYRERETPNADAERTPDNSTFAGNPEQDSVAAIKAAIGNQNIRKNAVLAVEMLLSA SPEHFRPDDKSKAGSYDLSRAWEWAETSAQWLRERYGNRVIKAVMHLDEATPHMHATIVPLDDKGKLNCRALFGGTRHTL TDLQTDYAKAVEKLGIERGLQGSWAKHQDVAKFYAITQNQEHPAVPRAKGVDIPPLPGRVERLSDSVLTRFAQEVAASAI DAQQDKTVPALQMLTGENAMLKKQTEDLRRSNAALSQERDRLKREADQLRGWPLPEVLTQLYGAREASDSKASYKSRKFE LPDGTKIGVTDDLWHDNTNNVGKKGAINLVMHLSGYGQEQYKQAVRDLADAFGSDAANRAVSRHIINTAPKQAERITLES IKEPAQLPQPCPETWQRVRGYLTKERKLPGKLIDAVHCQGLVYSDQRTNCVFPCDKESGAFLRGSGKQPFKRTMGQGHLP FHLKGEDSKVMVAESAIDALSLKALYPASSVIATGGNMPPERLKPYLNGKEVYLAHDADKAGEAQAARIQEHYPEAKRLC PHGAKIGMNICRKSRNGKYSLSGNGKWIWNAECPYSLPSGSCGISASTRPISSAAVMPNASEINTKDASEG
Sequences:
>Translated_631_residues MPAYAVLRIQKLKSWGDIAGSDAHNYRERETPNADAERTPDNSTFAGNPEQDSVAAIKAAIGNQNIRKNAVLAVEMLLSA SPEHFRPDDKSKAGSYDLSRAWEWAETSAQWLRERYGNRVIKAVMHLDEATPHMHATIVPLDDKGKLNCRALFGGTRHTL TDLQTDYAKAVEKLGIERGLQGSWAKHQDVAKFYAITQNQEHPAVPRAKGVDIPPLPGRVERLSDSVLTRFAQEVAASAI DAQQDKTVPALQMLTGENAMLKKQTEDLRRSNAALSQERDRLKREADQLRGWPLPEVLTQLYGAREASDSKASYKSRKFE LPDGTKIGVTDDLWHDNTNNVGKKGAINLVMHLSGYGQEQYKQAVRDLADAFGSDAANRAVSRHIINTAPKQAERITLES IKEPAQLPQPCPETWQRVRGYLTKERKLPGKLIDAVHCQGLVYSDQRTNCVFPCDKESGAFLRGSGKQPFKRTMGQGHLP FHLKGEDSKVMVAESAIDALSLKALYPASSVIATGGNMPPERLKPYLNGKEVYLAHDADKAGEAQAARIQEHYPEAKRLC PHGAKIGMNICRKSRNGKYSLSGNGKWIWNAECPYSLPSGSCGISASTRPISSAAVMPNASEINTKDASEG >Mature_630_residues PAYAVLRIQKLKSWGDIAGSDAHNYRERETPNADAERTPDNSTFAGNPEQDSVAAIKAAIGNQNIRKNAVLAVEMLLSAS PEHFRPDDKSKAGSYDLSRAWEWAETSAQWLRERYGNRVIKAVMHLDEATPHMHATIVPLDDKGKLNCRALFGGTRHTLT DLQTDYAKAVEKLGIERGLQGSWAKHQDVAKFYAITQNQEHPAVPRAKGVDIPPLPGRVERLSDSVLTRFAQEVAASAID AQQDKTVPALQMLTGENAMLKKQTEDLRRSNAALSQERDRLKREADQLRGWPLPEVLTQLYGAREASDSKASYKSRKFEL PDGTKIGVTDDLWHDNTNNVGKKGAINLVMHLSGYGQEQYKQAVRDLADAFGSDAANRAVSRHIINTAPKQAERITLESI KEPAQLPQPCPETWQRVRGYLTKERKLPGKLIDAVHCQGLVYSDQRTNCVFPCDKESGAFLRGSGKQPFKRTMGQGHLPF HLKGEDSKVMVAESAIDALSLKALYPASSVIATGGNMPPERLKPYLNGKEVYLAHDADKAGEAQAARIQEHYPEAKRLCP HGAKIGMNICRKSRNGKYSLSGNGKWIWNAECPYSLPSGSCGISASTRPISSAAVMPNASEINTKDASEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Toprim domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001668 - InterPro: IPR006171 - InterPro: IPR002694 [H]
Pfam domain/function: PF01076 Mob_Pre; PF01751 Toprim [H]
EC number: NA
Molecular weight: Translated: 69447; Mature: 69316
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAYAVLRIQKLKSWGDIAGSDAHNYRERETPNADAERTPDNSTFAGNPEQDSVAAIKAA CCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IGNQNIRKNAVLAVEMLLSASPEHFRPDDKSKAGSYDLSRAWEWAETSAQWLRERYGNRV HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IKAVMHLDEATPHMHATIVPLDDKGKLNCRALFGGTRHTLTDLQTDYAKAVEKLGIERGL HHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC QGSWAKHQDVAKFYAITQNQEHPAVPRAKGVDIPPLPGRVERLSDSVLTRFAQEVAASAI CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DAQQDKTVPALQMLTGENAMLKKQTEDLRRSNAALSQERDRLKREADQLRGWPLPEVLTQ HHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LYGAREASDSKASYKSRKFELPDGTKIGVTDDLWHDNTNNVGKKGAINLVMHLSGYGQEQ HHCCCCCCCCHHHHHHCEEECCCCCEECCCHHCCCCCCCCCCCCCCEEEEEEECCCCHHH YKQAVRDLADAFGSDAANRAVSRHIINTAPKQAERITLESIKEPAQLPQPCPETWQRVRG HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCHHHHHHHHH YLTKERKLPGKLIDAVHCQGLVYSDQRTNCVFPCDKESGAFLRGSGKQPFKRTMGQGHLP HHHHHHCCCHHHHHHHHHCCEEECCCCCCEEECCCCCCCCEEECCCCCHHHHHCCCCCCC FHLKGEDSKVMVAESAIDALSLKALYPASSVIATGGNMPPERLKPYLNGKEVYLAHDADK EEEECCCCEEEEEHHHHHHHHHHHHCCCHHHEECCCCCCHHHHCCCCCCCEEEEEECCCC AGEAQAARIQEHYPEAKRLCPHGAKIGMNICRKSRNGKYSLSGNGKWIWNAECPYSLPSG CCCHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCCCC SCGISASTRPISSAAVMPNASEINTKDASEG CCCCCCCCCCCCCCEECCCCHHCCCCCCCCC >Mature Secondary Structure PAYAVLRIQKLKSWGDIAGSDAHNYRERETPNADAERTPDNSTFAGNPEQDSVAAIKAA CCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IGNQNIRKNAVLAVEMLLSASPEHFRPDDKSKAGSYDLSRAWEWAETSAQWLRERYGNRV HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IKAVMHLDEATPHMHATIVPLDDKGKLNCRALFGGTRHTLTDLQTDYAKAVEKLGIERGL HHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC QGSWAKHQDVAKFYAITQNQEHPAVPRAKGVDIPPLPGRVERLSDSVLTRFAQEVAASAI CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DAQQDKTVPALQMLTGENAMLKKQTEDLRRSNAALSQERDRLKREADQLRGWPLPEVLTQ HHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LYGAREASDSKASYKSRKFELPDGTKIGVTDDLWHDNTNNVGKKGAINLVMHLSGYGQEQ HHCCCCCCCCHHHHHHCEEECCCCCEECCCHHCCCCCCCCCCCCCCEEEEEEECCCCHHH YKQAVRDLADAFGSDAANRAVSRHIINTAPKQAERITLESIKEPAQLPQPCPETWQRVRG HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCHHHHHHHHH YLTKERKLPGKLIDAVHCQGLVYSDQRTNCVFPCDKESGAFLRGSGKQPFKRTMGQGHLP HHHHHHCCCHHHHHHHHHCCEEECCCCCCEEECCCCCCCCEEECCCCCHHHHHCCCCCCC FHLKGEDSKVMVAESAIDALSLKALYPASSVIATGGNMPPERLKPYLNGKEVYLAHDADK EEEECCCCEEEEEHHHHHHHHHHHHCCCHHHEECCCCCCHHHHCCCCCCCEEEEEECCCC AGEAQAARIQEHYPEAKRLCPHGAKIGMNICRKSRNGKYSLSGNGKWIWNAECPYSLPSG CCCHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCCCC SCGISASTRPISSAAVMPNASEINTKDASEG CCCCCCCCCCCCCCEECCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA