Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220903697

Identifier: 220903697

GI number: 220903697

Start: 509650

End: 510195

Strand: Reverse

Name: 220903697

Synonym: Ddes_0419

Alternate gene names: NA

Gene position: 510195-509650 (Counterclockwise)

Preceding gene: 220903699

Following gene: 220903696

Centisome position: 17.76

GC content: 51.47

Gene sequence:

>546_bases
ATGAAATCACGTCGCTATGTTTTCAGTTGGGACTTTATCGGCGATATCCAGAAAGGACGGCCTAACCTCGGCAACTCCGT
CAGCATCGAAGCATACAGGCTTTTTCTGTATACCATGCGTGACGTGCTGGAAGAAAGTTACGGTACTGAAGAGTCAGAAA
AAATTCTCTACCGTGCCGGCTTTCTTGCCGGTGAAAACGTTGTAGAAAACTACCTGCCCGGGTATACGCTGTTTGATGAT
TTTGTGGCTGCCCTGCATGACCTTCTGCTTGAAAAAAAGATCGGCATACTGCGCATAGAATCCAGCGACCTTTCCACAAA
CACCTTTTGCATCACCGTTTCGGAAGATGTGGACTGCTCCGGCCTGCCTGAATGCGATCATGTTATCTGCACCTACGACG
AAGGCTTCGTGGCGGGTCTTTTCAGCTCCTTCACGGGGCGGCGATTTACCGCAAAAGAGGTGGACTGCTGGTGCACCGGC
GACAGGACATGCCGCTTTGTTGTCCAACTGACTGAAGAGCATGCGGCCCCCCTGCGGGATGATTAG

Upstream 100 bases:

>100_bases
AAATTGCGCCGACATCTGGATAAATTGAAACCATATTATCAGAGCCGGAAATCCGAAGCGCTGAACTCACACATCAACTC
CGAACAAAGTTGGAAACAGC

Downstream 100 bases:

>100_bases
ACGCGGCGACGCCACTAGCGCGCGGCACGCGCCCGGCACCGCAAAACAGCTATCAGCCCTCCCAATGAGCATGCCCTCTG
ATGATACAAGCTGCATCTGG

Product: 4-vinyl reductase 4VR

Products: NA

Alternate protein names: ArsR Family Transcriptional Regulator

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKSRRYVFSWDFIGDIQKGRPNLGNSVSIEAYRLFLYTMRDVLEESYGTEESEKILYRAGFLAGENVVENYLPGYTLFDD
FVAALHDLLLEKKIGILRIESSDLSTNTFCITVSEDVDCSGLPECDHVICTYDEGFVAGLFSSFTGRRFTAKEVDCWCTG
DRTCRFVVQLTEEHAAPLRDD

Sequences:

>Translated_181_residues
MKSRRYVFSWDFIGDIQKGRPNLGNSVSIEAYRLFLYTMRDVLEESYGTEESEKILYRAGFLAGENVVENYLPGYTLFDD
FVAALHDLLLEKKIGILRIESSDLSTNTFCITVSEDVDCSGLPECDHVICTYDEGFVAGLFSSFTGRRFTAKEVDCWCTG
DRTCRFVVQLTEEHAAPLRDD
>Mature_181_residues
MKSRRYVFSWDFIGDIQKGRPNLGNSVSIEAYRLFLYTMRDVLEESYGTEESEKILYRAGFLAGENVVENYLPGYTLFDD
FVAALHDLLLEKKIGILRIESSDLSTNTFCITVSEDVDCSGLPECDHVICTYDEGFVAGLFSSFTGRRFTAKEVDCWCTG
DRTCRFVVQLTEEHAAPLRDD

Specific function: Unknown

COG id: COG1719

COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20579; Mature: 20579

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRRYVFSWDFIGDIQKGRPNLGNSVSIEAYRLFLYTMRDVLEESYGTEESEKILYRAG
CCCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
FLAGENVVENYLPGYTLFDDFVAALHDLLLEKKIGILRIESSDLSTNTFCITVSEDVDCS
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCC
GLPECDHVICTYDEGFVAGLFSSFTGRRFTAKEVDCWCTGDRTCRFVVQLTEEHAAPLRD
CCCCCCEEEEECCCCHHHHHHHHHCCCEEECCCCEEEECCCCEEEEEEEEHHHHCCCCCC
D
C
>Mature Secondary Structure
MKSRRYVFSWDFIGDIQKGRPNLGNSVSIEAYRLFLYTMRDVLEESYGTEESEKILYRAG
CCCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
FLAGENVVENYLPGYTLFDDFVAALHDLLLEKKIGILRIESSDLSTNTFCITVSEDVDCS
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCC
GLPECDHVICTYDEGFVAGLFSSFTGRRFTAKEVDCWCTGDRTCRFVVQLTEEHAAPLRD
CCCCCCEEEEECCCCHHHHHHHHHCCCEEECCCCEEEECCCCEEEEEEEEHHHHCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA