| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903697
Identifier: 220903697
GI number: 220903697
Start: 509650
End: 510195
Strand: Reverse
Name: 220903697
Synonym: Ddes_0419
Alternate gene names: NA
Gene position: 510195-509650 (Counterclockwise)
Preceding gene: 220903699
Following gene: 220903696
Centisome position: 17.76
GC content: 51.47
Gene sequence:
>546_bases ATGAAATCACGTCGCTATGTTTTCAGTTGGGACTTTATCGGCGATATCCAGAAAGGACGGCCTAACCTCGGCAACTCCGT CAGCATCGAAGCATACAGGCTTTTTCTGTATACCATGCGTGACGTGCTGGAAGAAAGTTACGGTACTGAAGAGTCAGAAA AAATTCTCTACCGTGCCGGCTTTCTTGCCGGTGAAAACGTTGTAGAAAACTACCTGCCCGGGTATACGCTGTTTGATGAT TTTGTGGCTGCCCTGCATGACCTTCTGCTTGAAAAAAAGATCGGCATACTGCGCATAGAATCCAGCGACCTTTCCACAAA CACCTTTTGCATCACCGTTTCGGAAGATGTGGACTGCTCCGGCCTGCCTGAATGCGATCATGTTATCTGCACCTACGACG AAGGCTTCGTGGCGGGTCTTTTCAGCTCCTTCACGGGGCGGCGATTTACCGCAAAAGAGGTGGACTGCTGGTGCACCGGC GACAGGACATGCCGCTTTGTTGTCCAACTGACTGAAGAGCATGCGGCCCCCCTGCGGGATGATTAG
Upstream 100 bases:
>100_bases AAATTGCGCCGACATCTGGATAAATTGAAACCATATTATCAGAGCCGGAAATCCGAAGCGCTGAACTCACACATCAACTC CGAACAAAGTTGGAAACAGC
Downstream 100 bases:
>100_bases ACGCGGCGACGCCACTAGCGCGCGGCACGCGCCCGGCACCGCAAAACAGCTATCAGCCCTCCCAATGAGCATGCCCTCTG ATGATACAAGCTGCATCTGG
Product: 4-vinyl reductase 4VR
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKSRRYVFSWDFIGDIQKGRPNLGNSVSIEAYRLFLYTMRDVLEESYGTEESEKILYRAGFLAGENVVENYLPGYTLFDD FVAALHDLLLEKKIGILRIESSDLSTNTFCITVSEDVDCSGLPECDHVICTYDEGFVAGLFSSFTGRRFTAKEVDCWCTG DRTCRFVVQLTEEHAAPLRDD
Sequences:
>Translated_181_residues MKSRRYVFSWDFIGDIQKGRPNLGNSVSIEAYRLFLYTMRDVLEESYGTEESEKILYRAGFLAGENVVENYLPGYTLFDD FVAALHDLLLEKKIGILRIESSDLSTNTFCITVSEDVDCSGLPECDHVICTYDEGFVAGLFSSFTGRRFTAKEVDCWCTG DRTCRFVVQLTEEHAAPLRDD >Mature_181_residues MKSRRYVFSWDFIGDIQKGRPNLGNSVSIEAYRLFLYTMRDVLEESYGTEESEKILYRAGFLAGENVVENYLPGYTLFDD FVAALHDLLLEKKIGILRIESSDLSTNTFCITVSEDVDCSGLPECDHVICTYDEGFVAGLFSSFTGRRFTAKEVDCWCTG DRTCRFVVQLTEEHAAPLRDD
Specific function: Unknown
COG id: COG1719
COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20579; Mature: 20579
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRRYVFSWDFIGDIQKGRPNLGNSVSIEAYRLFLYTMRDVLEESYGTEESEKILYRAG CCCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC FLAGENVVENYLPGYTLFDDFVAALHDLLLEKKIGILRIESSDLSTNTFCITVSEDVDCS CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCC GLPECDHVICTYDEGFVAGLFSSFTGRRFTAKEVDCWCTGDRTCRFVVQLTEEHAAPLRD CCCCCCEEEEECCCCHHHHHHHHHCCCEEECCCCEEEECCCCEEEEEEEEHHHHCCCCCC D C >Mature Secondary Structure MKSRRYVFSWDFIGDIQKGRPNLGNSVSIEAYRLFLYTMRDVLEESYGTEESEKILYRAG CCCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC FLAGENVVENYLPGYTLFDDFVAALHDLLLEKKIGILRIESSDLSTNTFCITVSEDVDCS CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCCC GLPECDHVICTYDEGFVAGLFSSFTGRRFTAKEVDCWCTGDRTCRFVVQLTEEHAAPLRD CCCCCCEEEEECCCCHHHHHHHHHCCCEEECCCCEEEECCCCEEEEEEEEHHHHCCCCCC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA