| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903672
Identifier: 220903672
GI number: 220903672
Start: 477993
End: 479243
Strand: Direct
Name: 220903672
Synonym: Ddes_0393
Alternate gene names: NA
Gene position: 477993-479243 (Clockwise)
Preceding gene: 220903671
Following gene: 220903673
Centisome position: 16.63
GC content: 62.83
Gene sequence:
>1251_bases ATGATTTCGCAGGCGGCATATATCTCTTTGGCGGCAATCGGTGCGAGGCGCAAGGCGCCTTCGGCCCTGGTCGCCTTGTG GGGCATATTGCTTGCTCTGGCTCTTGCCTGCCTGTGGCCGGCCGGAACCGCGCAGGCCGCGGGTGGGGTGCCGCAGGCCG TGTGGCAGGACAATGATCGAAATCACCGGCGTTCACCGCCGCAGGTAAAAAATCAGCTCCGTCCGCCGCAGGTGCACGCG GGGCAGTTGCCGCTGGCTCCGGAGGCGCACGACGCCCGCACCGCCCGTACCGGAACGCAACTGGCAGCTGGTGATGCGCC CGTGGCGCAGGAAGGGCAGTTGAGCCTGCTGGGACAGGGCGACTGGCGCCTCAAGATCGTTCCCGCTGCCGTCAGCAACG GCAGCATGGTGCTTTTGGGGGACATTGCGGTTCTTCTCGGCCAGATGGACCCGGCCCAGTGGAAAGGCCTGCGCGCTACG CCGTTATGGGAAGCGCCGCCGGAAGAAGGCAAACCTTTACAGATCAACCGCTCGCGCCTGTCACAGGCCTTGCGGCAGGC TCTGGGACCGGACATGGCCGGGCGCTGTATCCTGCCAACATCGCTCGTCATTCAGCGCGGCGGTCTGGTTTTTCGTGAGG ATGACCTGCGCAATTACGTTGTCAAAAGCCTGACTCCACAACTGGCGGCCATGCCGGGTGAGGCGGAACTTACCGATTTC AGGCTGCCGGAATACATTTTTCTTGCCCACAGCCAGCAGCAGGTTCAGCTTGAGCCGGGCAAGCTTGCTCCCGGGCGCGT ACCCCTGCGCTTTGCCGTACAGGAGGCTGACGGTACGGTGCTGCGCCGGGTGGCGGGCACGGCCACGCTGTCATTATGGC TCACGGTACCTACGGCGGCCCAGTCAATGAACAAGGGCGACGCCCTCTCAGCGCAAAGCGTGACCTTTATGCGCGTCAAC GCGGGCCAGTTGCGCGATCTGCCCTGGGACGGGCGCGGAGGCCCGTGGCAGCTTGTGCGCGCCATCAATGCGGGCGATCC CATATTGCAGAGCGATCTTGCAAGTCAGCTTATGGTCAAGCGCGGCGATGTGGTGTCCCTCATATTTTCCAGAGGCAATC TGCGTATAACCACGCAGGCGCAGGCGCTGGCTGACGGCGAACCGGGGGCCACCATTCCGGTGCGGAACTTGCAAACTAAA AAACAGGTCTTCGGCATTGTCAAAAACGGCAATACCGTTGAGATAAACTAG
Upstream 100 bases:
>100_bases GCGTGCGTATGAGGTGAACTCCAAGTCCATCCAGACGTCGGACTCCATGCTGGGTATTGCTGTACAGCTCAAGCGCAGCT AGCGGCGAGGGAGGCACGGC
Downstream 100 bases:
>100_bases ACGTTACGCCGAACGCGGCCGGACGCGGTTATTGAAGGAGAGGAGCATATGCAGGCACGTCACATCATCCCCGTCATGGC GCTGGCTTTTGCGCTGTGTG
Product: flagella basal body P-ring formation protein FlgA
Products: NA
Alternate protein names: FlgA Family Protein
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MISQAAYISLAAIGARRKAPSALVALWGILLALALACLWPAGTAQAAGGVPQAVWQDNDRNHRRSPPQVKNQLRPPQVHA GQLPLAPEAHDARTARTGTQLAAGDAPVAQEGQLSLLGQGDWRLKIVPAAVSNGSMVLLGDIAVLLGQMDPAQWKGLRAT PLWEAPPEEGKPLQINRSRLSQALRQALGPDMAGRCILPTSLVIQRGGLVFREDDLRNYVVKSLTPQLAAMPGEAELTDF RLPEYIFLAHSQQQVQLEPGKLAPGRVPLRFAVQEADGTVLRRVAGTATLSLWLTVPTAAQSMNKGDALSAQSVTFMRVN AGQLRDLPWDGRGGPWQLVRAINAGDPILQSDLASQLMVKRGDVVSLIFSRGNLRITTQAQALADGEPGATIPVRNLQTK KQVFGIVKNGNTVEIN
Sequences:
>Translated_416_residues MISQAAYISLAAIGARRKAPSALVALWGILLALALACLWPAGTAQAAGGVPQAVWQDNDRNHRRSPPQVKNQLRPPQVHA GQLPLAPEAHDARTARTGTQLAAGDAPVAQEGQLSLLGQGDWRLKIVPAAVSNGSMVLLGDIAVLLGQMDPAQWKGLRAT PLWEAPPEEGKPLQINRSRLSQALRQALGPDMAGRCILPTSLVIQRGGLVFREDDLRNYVVKSLTPQLAAMPGEAELTDF RLPEYIFLAHSQQQVQLEPGKLAPGRVPLRFAVQEADGTVLRRVAGTATLSLWLTVPTAAQSMNKGDALSAQSVTFMRVN AGQLRDLPWDGRGGPWQLVRAINAGDPILQSDLASQLMVKRGDVVSLIFSRGNLRITTQAQALADGEPGATIPVRNLQTK KQVFGIVKNGNTVEIN >Mature_416_residues MISQAAYISLAAIGARRKAPSALVALWGILLALALACLWPAGTAQAAGGVPQAVWQDNDRNHRRSPPQVKNQLRPPQVHA GQLPLAPEAHDARTARTGTQLAAGDAPVAQEGQLSLLGQGDWRLKIVPAAVSNGSMVLLGDIAVLLGQMDPAQWKGLRAT PLWEAPPEEGKPLQINRSRLSQALRQALGPDMAGRCILPTSLVIQRGGLVFREDDLRNYVVKSLTPQLAAMPGEAELTDF RLPEYIFLAHSQQQVQLEPGKLAPGRVPLRFAVQEADGTVLRRVAGTATLSLWLTVPTAAQSMNKGDALSAQSVTFMRVN AGQLRDLPWDGRGGPWQLVRAINAGDPILQSDLASQLMVKRGDVVSLIFSRGNLRITTQAQALADGEPGATIPVRNLQTK KQVFGIVKNGNTVEIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44553; Mature: 44553
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISQAAYISLAAIGARRKAPSALVALWGILLALALACLWPAGTAQAAGGVPQAVWQDNDR CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHCCCCC NHRRSPPQVKNQLRPPQVHAGQLPLAPEAHDARTARTGTQLAAGDAPVAQEGQLSLLGQG CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCEEEEECC DWRLKIVPAAVSNGSMVLLGDIAVLLGQMDPAQWKGLRATPLWEAPPEEGKPLQINRSRL CEEEEEEEEECCCCCEEEEEHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCEEECHHHH SQALRQALGPDMAGRCILPTSLVIQRGGLVFREDDLRNYVVKSLTPQLAAMPGEAELTDF HHHHHHHCCCCCCCCEECCHHHHHHCCCEEEECCHHHHHHHHHCCHHHHCCCCCCCCCCC RLPEYIFLAHSQQQVQLEPGKLAPGRVPLRFAVQEADGTVLRRVAGTATLSLWLTVPTAA CCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCEEEEEEEECCHHH QSMNKGDALSAQSVTFMRVNAGQLRDLPWDGRGGPWQLVRAINAGDPILQSDLASQLMVK HHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHH RGDVVSLIFSRGNLRITTQAQALADGEPGATIPVRNLQTKKQVFGIVKNGNTVEIN CCCEEEEEECCCCEEEEECHHHHCCCCCCCEEECCCCHHHHHHEEEEECCCEEEEC >Mature Secondary Structure MISQAAYISLAAIGARRKAPSALVALWGILLALALACLWPAGTAQAAGGVPQAVWQDNDR CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHCCCCC NHRRSPPQVKNQLRPPQVHAGQLPLAPEAHDARTARTGTQLAAGDAPVAQEGQLSLLGQG CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCEEEEECC DWRLKIVPAAVSNGSMVLLGDIAVLLGQMDPAQWKGLRATPLWEAPPEEGKPLQINRSRL CEEEEEEEEECCCCCEEEEEHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCEEECHHHH SQALRQALGPDMAGRCILPTSLVIQRGGLVFREDDLRNYVVKSLTPQLAAMPGEAELTDF HHHHHHHCCCCCCCCEECCHHHHHHCCCEEEECCHHHHHHHHHCCHHHHCCCCCCCCCCC RLPEYIFLAHSQQQVQLEPGKLAPGRVPLRFAVQEADGTVLRRVAGTATLSLWLTVPTAA CCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCEEEEEEEECCHHH QSMNKGDALSAQSVTFMRVNAGQLRDLPWDGRGGPWQLVRAINAGDPILQSDLASQLMVK HHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHH RGDVVSLIFSRGNLRITTQAQALADGEPGATIPVRNLQTKKQVFGIVKNGNTVEIN CCCEEEEEECCCCEEEEECHHHHCCCCCCCEEECCCCHHHHHHEEEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA