Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220903672

Identifier: 220903672

GI number: 220903672

Start: 477993

End: 479243

Strand: Direct

Name: 220903672

Synonym: Ddes_0393

Alternate gene names: NA

Gene position: 477993-479243 (Clockwise)

Preceding gene: 220903671

Following gene: 220903673

Centisome position: 16.63

GC content: 62.83

Gene sequence:

>1251_bases
ATGATTTCGCAGGCGGCATATATCTCTTTGGCGGCAATCGGTGCGAGGCGCAAGGCGCCTTCGGCCCTGGTCGCCTTGTG
GGGCATATTGCTTGCTCTGGCTCTTGCCTGCCTGTGGCCGGCCGGAACCGCGCAGGCCGCGGGTGGGGTGCCGCAGGCCG
TGTGGCAGGACAATGATCGAAATCACCGGCGTTCACCGCCGCAGGTAAAAAATCAGCTCCGTCCGCCGCAGGTGCACGCG
GGGCAGTTGCCGCTGGCTCCGGAGGCGCACGACGCCCGCACCGCCCGTACCGGAACGCAACTGGCAGCTGGTGATGCGCC
CGTGGCGCAGGAAGGGCAGTTGAGCCTGCTGGGACAGGGCGACTGGCGCCTCAAGATCGTTCCCGCTGCCGTCAGCAACG
GCAGCATGGTGCTTTTGGGGGACATTGCGGTTCTTCTCGGCCAGATGGACCCGGCCCAGTGGAAAGGCCTGCGCGCTACG
CCGTTATGGGAAGCGCCGCCGGAAGAAGGCAAACCTTTACAGATCAACCGCTCGCGCCTGTCACAGGCCTTGCGGCAGGC
TCTGGGACCGGACATGGCCGGGCGCTGTATCCTGCCAACATCGCTCGTCATTCAGCGCGGCGGTCTGGTTTTTCGTGAGG
ATGACCTGCGCAATTACGTTGTCAAAAGCCTGACTCCACAACTGGCGGCCATGCCGGGTGAGGCGGAACTTACCGATTTC
AGGCTGCCGGAATACATTTTTCTTGCCCACAGCCAGCAGCAGGTTCAGCTTGAGCCGGGCAAGCTTGCTCCCGGGCGCGT
ACCCCTGCGCTTTGCCGTACAGGAGGCTGACGGTACGGTGCTGCGCCGGGTGGCGGGCACGGCCACGCTGTCATTATGGC
TCACGGTACCTACGGCGGCCCAGTCAATGAACAAGGGCGACGCCCTCTCAGCGCAAAGCGTGACCTTTATGCGCGTCAAC
GCGGGCCAGTTGCGCGATCTGCCCTGGGACGGGCGCGGAGGCCCGTGGCAGCTTGTGCGCGCCATCAATGCGGGCGATCC
CATATTGCAGAGCGATCTTGCAAGTCAGCTTATGGTCAAGCGCGGCGATGTGGTGTCCCTCATATTTTCCAGAGGCAATC
TGCGTATAACCACGCAGGCGCAGGCGCTGGCTGACGGCGAACCGGGGGCCACCATTCCGGTGCGGAACTTGCAAACTAAA
AAACAGGTCTTCGGCATTGTCAAAAACGGCAATACCGTTGAGATAAACTAG

Upstream 100 bases:

>100_bases
GCGTGCGTATGAGGTGAACTCCAAGTCCATCCAGACGTCGGACTCCATGCTGGGTATTGCTGTACAGCTCAAGCGCAGCT
AGCGGCGAGGGAGGCACGGC

Downstream 100 bases:

>100_bases
ACGTTACGCCGAACGCGGCCGGACGCGGTTATTGAAGGAGAGGAGCATATGCAGGCACGTCACATCATCCCCGTCATGGC
GCTGGCTTTTGCGCTGTGTG

Product: flagella basal body P-ring formation protein FlgA

Products: NA

Alternate protein names: FlgA Family Protein

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MISQAAYISLAAIGARRKAPSALVALWGILLALALACLWPAGTAQAAGGVPQAVWQDNDRNHRRSPPQVKNQLRPPQVHA
GQLPLAPEAHDARTARTGTQLAAGDAPVAQEGQLSLLGQGDWRLKIVPAAVSNGSMVLLGDIAVLLGQMDPAQWKGLRAT
PLWEAPPEEGKPLQINRSRLSQALRQALGPDMAGRCILPTSLVIQRGGLVFREDDLRNYVVKSLTPQLAAMPGEAELTDF
RLPEYIFLAHSQQQVQLEPGKLAPGRVPLRFAVQEADGTVLRRVAGTATLSLWLTVPTAAQSMNKGDALSAQSVTFMRVN
AGQLRDLPWDGRGGPWQLVRAINAGDPILQSDLASQLMVKRGDVVSLIFSRGNLRITTQAQALADGEPGATIPVRNLQTK
KQVFGIVKNGNTVEIN

Sequences:

>Translated_416_residues
MISQAAYISLAAIGARRKAPSALVALWGILLALALACLWPAGTAQAAGGVPQAVWQDNDRNHRRSPPQVKNQLRPPQVHA
GQLPLAPEAHDARTARTGTQLAAGDAPVAQEGQLSLLGQGDWRLKIVPAAVSNGSMVLLGDIAVLLGQMDPAQWKGLRAT
PLWEAPPEEGKPLQINRSRLSQALRQALGPDMAGRCILPTSLVIQRGGLVFREDDLRNYVVKSLTPQLAAMPGEAELTDF
RLPEYIFLAHSQQQVQLEPGKLAPGRVPLRFAVQEADGTVLRRVAGTATLSLWLTVPTAAQSMNKGDALSAQSVTFMRVN
AGQLRDLPWDGRGGPWQLVRAINAGDPILQSDLASQLMVKRGDVVSLIFSRGNLRITTQAQALADGEPGATIPVRNLQTK
KQVFGIVKNGNTVEIN
>Mature_416_residues
MISQAAYISLAAIGARRKAPSALVALWGILLALALACLWPAGTAQAAGGVPQAVWQDNDRNHRRSPPQVKNQLRPPQVHA
GQLPLAPEAHDARTARTGTQLAAGDAPVAQEGQLSLLGQGDWRLKIVPAAVSNGSMVLLGDIAVLLGQMDPAQWKGLRAT
PLWEAPPEEGKPLQINRSRLSQALRQALGPDMAGRCILPTSLVIQRGGLVFREDDLRNYVVKSLTPQLAAMPGEAELTDF
RLPEYIFLAHSQQQVQLEPGKLAPGRVPLRFAVQEADGTVLRRVAGTATLSLWLTVPTAAQSMNKGDALSAQSVTFMRVN
AGQLRDLPWDGRGGPWQLVRAINAGDPILQSDLASQLMVKRGDVVSLIFSRGNLRITTQAQALADGEPGATIPVRNLQTK
KQVFGIVKNGNTVEIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44553; Mature: 44553

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISQAAYISLAAIGARRKAPSALVALWGILLALALACLWPAGTAQAAGGVPQAVWQDNDR
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHCCCCC
NHRRSPPQVKNQLRPPQVHAGQLPLAPEAHDARTARTGTQLAAGDAPVAQEGQLSLLGQG
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCEEEEECC
DWRLKIVPAAVSNGSMVLLGDIAVLLGQMDPAQWKGLRATPLWEAPPEEGKPLQINRSRL
CEEEEEEEEECCCCCEEEEEHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCEEECHHHH
SQALRQALGPDMAGRCILPTSLVIQRGGLVFREDDLRNYVVKSLTPQLAAMPGEAELTDF
HHHHHHHCCCCCCCCEECCHHHHHHCCCEEEECCHHHHHHHHHCCHHHHCCCCCCCCCCC
RLPEYIFLAHSQQQVQLEPGKLAPGRVPLRFAVQEADGTVLRRVAGTATLSLWLTVPTAA
CCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCEEEEEEEECCHHH
QSMNKGDALSAQSVTFMRVNAGQLRDLPWDGRGGPWQLVRAINAGDPILQSDLASQLMVK
HHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHH
RGDVVSLIFSRGNLRITTQAQALADGEPGATIPVRNLQTKKQVFGIVKNGNTVEIN
CCCEEEEEECCCCEEEEECHHHHCCCCCCCEEECCCCHHHHHHEEEEECCCEEEEC
>Mature Secondary Structure
MISQAAYISLAAIGARRKAPSALVALWGILLALALACLWPAGTAQAAGGVPQAVWQDNDR
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHCCCCC
NHRRSPPQVKNQLRPPQVHAGQLPLAPEAHDARTARTGTQLAAGDAPVAQEGQLSLLGQG
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCEEEEECC
DWRLKIVPAAVSNGSMVLLGDIAVLLGQMDPAQWKGLRATPLWEAPPEEGKPLQINRSRL
CEEEEEEEEECCCCCEEEEEHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCEEECHHHH
SQALRQALGPDMAGRCILPTSLVIQRGGLVFREDDLRNYVVKSLTPQLAAMPGEAELTDF
HHHHHHHCCCCCCCCEECCHHHHHHCCCEEEECCHHHHHHHHHCCHHHHCCCCCCCCCCC
RLPEYIFLAHSQQQVQLEPGKLAPGRVPLRFAVQEADGTVLRRVAGTATLSLWLTVPTAA
CCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCEEEEEEEECCHHH
QSMNKGDALSAQSVTFMRVNAGQLRDLPWDGRGGPWQLVRAINAGDPILQSDLASQLMVK
HHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHH
RGDVVSLIFSRGNLRITTQAQALADGEPGATIPVRNLQTKKQVFGIVKNGNTVEIN
CCCEEEEEECCCCEEEEECHHHHCCCCCCCEEECCCCHHHHHHEEEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA