| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is yegH [H]
Identifier: 220903628
GI number: 220903628
Start: 424121
End: 425704
Strand: Direct
Name: yegH [H]
Synonym: Ddes_0348
Alternate gene names: 220903628
Gene position: 424121-425704 (Clockwise)
Preceding gene: 220903627
Following gene: 220903631
Centisome position: 14.76
GC content: 60.67
Gene sequence:
>1584_bases ATGTTCGACTTTTCATGGGTGACACACCTTTCTGCCTGGGCCGGCCTGGGTACACTTGTACTGCTTGAAGTGGTGCTCGG GGTGGACAACCTGGTTTTTATTTCCATTCTTGTCGGGCGCTTGCCCGGTGAGCGCAAACGGCAGGCTTTTCTGGTGGGCC TTGGGCTGGCCCTGCTTATGCGCATGCTGCTTCTTACCGTCATGGCGCGTCTGGCCACGCTGACCACCCCTCTGTTTGAA CTGGGGGGGCACGGTTTTGCCGCCCGCGATCTCATACTCATGGCCGGGGGCGTTTTTCTGCTGCTCAAGGGTACAATGGA GCTGCATGACCGGCTGGAAGGCCACAGTGGCCGGTATGCCGGGGACTCGGGGCATCATGCGGATTTCTGGCAGGTCATCT TTCAGATAGTGGTGCTGGACGCCGTATTCTCCCTTGATTCCATCATCACGGCCGTGGGCATGGTGGAGCATGTGACCATC ATGATGCTGGCGGTGGTCATCGCCATGGGCATCATGCTGCTGGCAGCGGCTCCGTTGCTCAATTTTATGGAGCGACATCC TACAGTTATCGTATTGTGCCTCGGTTTTTTGCTGATGATCGGCCTGAGCCTGCTGGCCGATGGCCTGGGTTTTCACATTC CCAAGGGCTACATGTACGCGGCCATTGTCTTTTCCATCATGGTGGAAGCGTGCAACCAGTGGGCCTTGCGCAACCGGCGC AGACGCTTCAGCATGCGCGACATGCGCGAATCCACGGCCCGCGTGATCCTGAATATTCTCGGGGGCAACGCCCCGGGGCA GGGCGATGCCCAGCTTGATGCCGCGGCCCTGGCCGGGGGAGAAAAGGAGCAGCTTTTCGCGCCCAAAGAGCGGGATATGC TGGCACGGGTCATACGTCTTGGCGGGCGCACGGCACGGTTCATTATGATTCCGCGCCAGCGTGTGAACTGGCTGGACAGC AATGCCGACCGCAAAACCGTGAACCGGTATGCCGCTTCGTCGCGTCTGGCCTGGCTGCCCGTATTGCGGCGTGACACGGA CGAGGTGCTCGGCGTGGTACATCCCGGTGATATCCTTGAGCGCGGCGACTGCTCGCCCGACGGCAAGTGGGATCTCAAGT CTTACATCCGGCCAGCGCCCACGATTTTTGAGCACACGCCCCTGCATGTGATTATGGAGGATTTTCGCACACATCCCACG CCCCTTTCTTTTGTGCGGGATGAGTACGGCAGCGTGGTGGGCGTGATTACCCCGGCGGAACTGTTGAGTGTGCTGGCCGG GCAGATGGGCGACATGCCCGCCGGGCCGGAGGCCTGCCGCCGTCCTGACGGCAGCTGGGTCATGCCGGGACGTCTTACGG TAGACCTGTTCGCAAGCTGGCTGGGCATCAGCCTGCCCAAGCGCCTGTCCAGCGCTACTCTGGCGGGCTTTATTCTGGAG CGGCTCGGTCGCATTCCTGAAAAGGGCGAGCGCCTGCACTATCAGGGGTGGGAACTGGAAATTACCCGTATGGACAAGCG TCGCATTGATGAGGTGCGCGCCGTGCGCATGCTGACCCCGCCGGGCAAAGGCAGAAAAAAATGA
Upstream 100 bases:
>100_bases AAGGGGGCTTTCGGCCCTCTTTTGTCTTTTTTTTCGGTGGCAGTGGGCCGCCGCATCCGTCATTTCGCAAGAAGGGGCAA CCGCCCCGGAGCGTGACACT
Downstream 100 bases:
>100_bases AGGGGTGCGTGAGCGATGGGAATGCGCCTACATCACGGGAAGACGCATGCGCAGAGATGGAGGAGCAGTATTTGTTCTTC GAGAAGGGGTTTTGTCGCCC
Product: Integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MFDFSWVTHLSAWAGLGTLVLLEVVLGVDNLVFISILVGRLPGERKRQAFLVGLGLALLMRMLLLTVMARLATLTTPLFE LGGHGFAARDLILMAGGVFLLLKGTMELHDRLEGHSGRYAGDSGHHADFWQVIFQIVVLDAVFSLDSIITAVGMVEHVTI MMLAVVIAMGIMLLAAAPLLNFMERHPTVIVLCLGFLLMIGLSLLADGLGFHIPKGYMYAAIVFSIMVEACNQWALRNRR RRFSMRDMRESTARVILNILGGNAPGQGDAQLDAAALAGGEKEQLFAPKERDMLARVIRLGGRTARFIMIPRQRVNWLDS NADRKTVNRYAASSRLAWLPVLRRDTDEVLGVVHPGDILERGDCSPDGKWDLKSYIRPAPTIFEHTPLHVIMEDFRTHPT PLSFVRDEYGSVVGVITPAELLSVLAGQMGDMPAGPEACRRPDGSWVMPGRLTVDLFASWLGISLPKRLSSATLAGFILE RLGRIPEKGERLHYQGWELEITRMDKRRIDEVRAVRMLTPPGKGRKK
Sequences:
>Translated_527_residues MFDFSWVTHLSAWAGLGTLVLLEVVLGVDNLVFISILVGRLPGERKRQAFLVGLGLALLMRMLLLTVMARLATLTTPLFE LGGHGFAARDLILMAGGVFLLLKGTMELHDRLEGHSGRYAGDSGHHADFWQVIFQIVVLDAVFSLDSIITAVGMVEHVTI MMLAVVIAMGIMLLAAAPLLNFMERHPTVIVLCLGFLLMIGLSLLADGLGFHIPKGYMYAAIVFSIMVEACNQWALRNRR RRFSMRDMRESTARVILNILGGNAPGQGDAQLDAAALAGGEKEQLFAPKERDMLARVIRLGGRTARFIMIPRQRVNWLDS NADRKTVNRYAASSRLAWLPVLRRDTDEVLGVVHPGDILERGDCSPDGKWDLKSYIRPAPTIFEHTPLHVIMEDFRTHPT PLSFVRDEYGSVVGVITPAELLSVLAGQMGDMPAGPEACRRPDGSWVMPGRLTVDLFASWLGISLPKRLSSATLAGFILE RLGRIPEKGERLHYQGWELEITRMDKRRIDEVRAVRMLTPPGKGRKK >Mature_527_residues MFDFSWVTHLSAWAGLGTLVLLEVVLGVDNLVFISILVGRLPGERKRQAFLVGLGLALLMRMLLLTVMARLATLTTPLFE LGGHGFAARDLILMAGGVFLLLKGTMELHDRLEGHSGRYAGDSGHHADFWQVIFQIVVLDAVFSLDSIITAVGMVEHVTI MMLAVVIAMGIMLLAAAPLLNFMERHPTVIVLCLGFLLMIGLSLLADGLGFHIPKGYMYAAIVFSIMVEACNQWALRNRR RRFSMRDMRESTARVILNILGGNAPGQGDAQLDAAALAGGEKEQLFAPKERDMLARVIRLGGRTARFIMIPRQRVNWLDS NADRKTVNRYAASSRLAWLPVLRRDTDEVLGVVHPGDILERGDCSPDGKWDLKSYIRPAPTIFEHTPLHVIMEDFRTHPT PLSFVRDEYGSVVGVITPAELLSVLAGQMGDMPAGPEACRRPDGSWVMPGRLTVDLFASWLGISLPKRLSSATLAGFILE RLGRIPEKGERLHYQGWELEITRMDKRRIDEVRAVRMLTPPGKGRKK
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Escherichia coli, GI87082033, Length=524, Percent_Identity=41.793893129771, Blast_Score=369, Evalue=1e-103, Organism=Escherichia coli, GI1788119, Length=512, Percent_Identity=42.578125, Blast_Score=357, Evalue=1e-99, Organism=Escherichia coli, GI1789197, Length=238, Percent_Identity=45.3781512605042, Blast_Score=194, Evalue=1e-50, Organism=Escherichia coli, GI1790664, Length=249, Percent_Identity=25.7028112449799, Blast_Score=102, Evalue=7e-23, Organism=Escherichia coli, GI1786879, Length=236, Percent_Identity=22.8813559322034, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI145693175, Length=239, Percent_Identity=23.8493723849372, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 58410; Mature: 58410
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDFSWVTHLSAWAGLGTLVLLEVVLGVDNLVFISILVGRLPGERKRQAFLVGLGLALLM CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RMLLLTVMARLATLTTPLFELGGHGFAARDLILMAGGVFLLLKGTMELHDRLEGHSGRYA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC GDSGHHADFWQVIFQIVVLDAVFSLDSIITAVGMVEHVTIMMLAVVIAMGIMLLAAAPLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFMERHPTVIVLCLGFLLMIGLSLLADGLGFHIPKGYMYAAIVFSIMVEACNQWALRNRR HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RRFSMRDMRESTARVILNILGGNAPGQGDAQLDAAALAGGEKEQLFAPKERDMLARVIRL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH GGRTARFIMIPRQRVNWLDSNADRKTVNRYAASSRLAWLPVLRRDTDEVLGVVHPGDILE CCCCEEEEEECHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHEECCCCHHHH RGDCSPDGKWDLKSYIRPAPTIFEHTPLHVIMEDFRTHPTPLSFVRDEYGSVVGVITPAE CCCCCCCCCCCHHHHCCCCCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECHHH LLSVLAGQMGDMPAGPEACRRPDGSWVMPGRLTVDLFASWLGISLPKRLSSATLAGFILE HHHHHHHHCCCCCCCHHHHCCCCCCEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RLGRIPEKGERLHYQGWELEITRMDKRRIDEVRAVRMLTPPGKGRKK HHCCCCCCCCEECCCCCEEEEEHHHHHHHHHHHHHHEECCCCCCCCC >Mature Secondary Structure MFDFSWVTHLSAWAGLGTLVLLEVVLGVDNLVFISILVGRLPGERKRQAFLVGLGLALLM CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RMLLLTVMARLATLTTPLFELGGHGFAARDLILMAGGVFLLLKGTMELHDRLEGHSGRYA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC GDSGHHADFWQVIFQIVVLDAVFSLDSIITAVGMVEHVTIMMLAVVIAMGIMLLAAAPLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFMERHPTVIVLCLGFLLMIGLSLLADGLGFHIPKGYMYAAIVFSIMVEACNQWALRNRR HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RRFSMRDMRESTARVILNILGGNAPGQGDAQLDAAALAGGEKEQLFAPKERDMLARVIRL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH GGRTARFIMIPRQRVNWLDSNADRKTVNRYAASSRLAWLPVLRRDTDEVLGVVHPGDILE CCCCEEEEEECHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHEECCCCHHHH RGDCSPDGKWDLKSYIRPAPTIFEHTPLHVIMEDFRTHPTPLSFVRDEYGSVVGVITPAE CCCCCCCCCCCHHHHCCCCCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECHHH LLSVLAGQMGDMPAGPEACRRPDGSWVMPGRLTVDLFASWLGISLPKRLSSATLAGFILE HHHHHHHHCCCCCCCHHHHCCCCCCEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RLGRIPEKGERLHYQGWELEITRMDKRRIDEVRAVRMLTPPGKGRKK HHCCCCCCCCEECCCCCEEEEEHHHHHHHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]