Click here to switch to the map view.

The map label for this gene is 220903573

Identifier: 220903573

GI number: 220903573

Start: 349866

End: 350996

Strand: Direct

Name: 220903573

Synonym: Ddes_0292

Alternate gene names: NA

Gene position: 349866-350996 (Clockwise)

Preceding gene: 220903564

Following gene: 220903574

Centisome position: 12.18

GC content: 62.16

Gene sequence:

>1131_bases
ATGAGCACACCTGATATTATTGCGCTGTTTTCCGGCGGCCTGGACAGTATCCTGGCGGCCAAGGTTCTGGAGCGGCAAGG
CCTTGCGGTGCGTTGCCTGCATTTTATCACGCCCTTTTTCGGTTCGGCCAAGGCAGTGCCCTACTGGCACAAGGTTTACG
GGTTGGACATCGTAAGCCGTGACGTGAGCGAAGCCTTTGCGACCATGCTGCGGCAGCGTCCGGAGCATGGCTTCGGCAAG
GTCATGAACCCCTGTGTGGACTGCAAGATCCTTCTGTTGCGCGAGGCGCGGAAATATATGGAATCCGTGGGCGCAGCGGG
GCTTGCCACGGGCGAGGTCCTGGGCCAGCGGCCCATGTCGCAGCGGCGCGACACCCTGCATCTTATCATGCGTGATGCGG
GCGTGGGCGGCATTCTGCTGCGTCCTCTTTCCGCCACCCATTTGCCGCCCACACAGATGGAAGAAAGCGGCCTTGTGGAC
CGCACCCGGCTTTTAAGCTTTTCAGGCAGGGGAAGGCGTGACCAGCTTGATCTGGCGGCGGAACTGGGTATTACGGAAAT
TCCCACTCCCGGAGGCGGCTGCCGCCTGACGGAAAAGGAAAATGCCCGTCGTTACTGGACGGTGCTGACCCTGCTGCCCG
AAGCTTCGGGCGAGGATTTTGCCCTTGCCAATCTGGGGCGCCAGTTCTGGCATCATGAAGACGGGCGGCATTACTGGCTG
TGCATCGGGCGCAACAGTGCGGATAATGACAGGCTGGCCGCCGCGGTTCGTCCTGGCGATCTGTTGTTGCGCCTGCGCGA
CCTGGCCGGGCCGATGGCACTGGCACGCTCCGGCACGGAATGGCCGCGCCCTGTGCTTGAAAGCGCTGCCGCGCATGTGG
CTTCCTATGCGCCGAAGGCTATGGCCCACGGCGGGGCAGTTGCTGTGCGGGCGCGTCAGGGAATGGAAGATGAAGCCGCG
CTTGATCTGGACGTGCTGCCGCAACGGCTGGGCGAAGCCTGGGGCGAAACGCCCTGGGACGATGTGAAGGCCGTCATCAG
GGCAGAAGCCAGGGAAAGGTTTGCAGCAATGCCGCATGGGCGCGTAACAGACCGGGATGCTGCTGAAAATCAGGATCCTT
CACAGATGTGA

Upstream 100 bases:

>100_bases
TGTATGACCTGTTGAATCTAATTACTGATAGGTGCTCTGGCAAGAAAATTCCCTTGTCCGCCCCTTGCGTAGTACGGCTT
GTCTGGCATACAAGCGCGGC

Downstream 100 bases:

>100_bases
CAGCTGTCGGCAAAGGTTGGGAGACGTCTTTACAAAGACTTCGCTTGAAGATATAGGGGTCCATTGCGTTAATAGTTTGT
GTTTGCGCCCCCAGCGGCGT

Product: thiamine biosynthesis protein

Products: NA

Alternate protein names: TRNA-Methyltransferase; Thiamine Biosynthesis ProteinExsB; tRNA Methyltransferase; Argininosuccinate Synthase; Queuosine Synthesis; tRNA -Methyltransferase; tRNA Methyl Transferase; Thiamine Biosynthesis Protein-Like Protein; tRNA Methyl Transferase-Like Protein; ThiI Family Protein; Arginino Succinate Synthase; TRNA(5-Methylaminomethyl-2-Thiouridylate) Methyltransferase

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MSTPDIIALFSGGLDSILAAKVLERQGLAVRCLHFITPFFGSAKAVPYWHKVYGLDIVSRDVSEAFATMLRQRPEHGFGK
VMNPCVDCKILLLREARKYMESVGAAGLATGEVLGQRPMSQRRDTLHLIMRDAGVGGILLRPLSATHLPPTQMEESGLVD
RTRLLSFSGRGRRDQLDLAAELGITEIPTPGGGCRLTEKENARRYWTVLTLLPEASGEDFALANLGRQFWHHEDGRHYWL
CIGRNSADNDRLAAAVRPGDLLLRLRDLAGPMALARSGTEWPRPVLESAAAHVASYAPKAMAHGGAVAVRARQGMEDEAA
LDLDVLPQRLGEAWGETPWDDVKAVIRAEARERFAAMPHGRVTDRDAAENQDPSQM

Sequences:

>Translated_376_residues
MSTPDIIALFSGGLDSILAAKVLERQGLAVRCLHFITPFFGSAKAVPYWHKVYGLDIVSRDVSEAFATMLRQRPEHGFGK
VMNPCVDCKILLLREARKYMESVGAAGLATGEVLGQRPMSQRRDTLHLIMRDAGVGGILLRPLSATHLPPTQMEESGLVD
RTRLLSFSGRGRRDQLDLAAELGITEIPTPGGGCRLTEKENARRYWTVLTLLPEASGEDFALANLGRQFWHHEDGRHYWL
CIGRNSADNDRLAAAVRPGDLLLRLRDLAGPMALARSGTEWPRPVLESAAAHVASYAPKAMAHGGAVAVRARQGMEDEAA
LDLDVLPQRLGEAWGETPWDDVKAVIRAEARERFAAMPHGRVTDRDAAENQDPSQM
>Mature_375_residues
STPDIIALFSGGLDSILAAKVLERQGLAVRCLHFITPFFGSAKAVPYWHKVYGLDIVSRDVSEAFATMLRQRPEHGFGKV
MNPCVDCKILLLREARKYMESVGAAGLATGEVLGQRPMSQRRDTLHLIMRDAGVGGILLRPLSATHLPPTQMEESGLVDR
TRLLSFSGRGRRDQLDLAAELGITEIPTPGGGCRLTEKENARRYWTVLTLLPEASGEDFALANLGRQFWHHEDGRHYWLC
IGRNSADNDRLAAAVRPGDLLLRLRDLAGPMALARSGTEWPRPVLESAAAHVASYAPKAMAHGGAVAVRARQGMEDEAAL
DLDVLPQRLGEAWGETPWDDVKAVIRAEARERFAAMPHGRVTDRDAAENQDPSQM

Specific function: Unknown

COG id: COG0482

COG function: function code J; Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41282; Mature: 41151

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPDIIALFSGGLDSILAAKVLERQGLAVRCLHFITPFFGSAKAVPYWHKVYGLDIVSR
CCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
DVSEAFATMLRQRPEHGFGKVMNPCVDCKILLLREARKYMESVGAAGLATGEVLGQRPMS
HHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHH
QRRDTLHLIMRDAGVGGILLRPLSATHLPPTQMEESGLVDRTRLLSFSGRGRRDQLDLAA
HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHH
ELGITEIPTPGGGCRLTEKENARRYWTVLTLLPEASGEDFALANLGRQFWHHEDGRHYWL
HCCCCCCCCCCCCEEECCCCCCHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEE
CIGRNSADNDRLAAAVRPGDLLLRLRDLAGPMALARSGTEWPRPVLESAAAHVASYAPKA
EEECCCCCCCCEEEEECCHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH
MAHGGAVAVRARQGMEDEAALDLDVLPQRLGEAWGETPWDDVKAVIRAEARERFAAMPHG
HHCCCEEEEEHHCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
RVTDRDAAENQDPSQM
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STPDIIALFSGGLDSILAAKVLERQGLAVRCLHFITPFFGSAKAVPYWHKVYGLDIVSR
CCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
DVSEAFATMLRQRPEHGFGKVMNPCVDCKILLLREARKYMESVGAAGLATGEVLGQRPMS
HHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHH
QRRDTLHLIMRDAGVGGILLRPLSATHLPPTQMEESGLVDRTRLLSFSGRGRRDQLDLAA
HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHH
ELGITEIPTPGGGCRLTEKENARRYWTVLTLLPEASGEDFALANLGRQFWHHEDGRHYWL
HCCCCCCCCCCCCEEECCCCCCHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEE
CIGRNSADNDRLAAAVRPGDLLLRLRDLAGPMALARSGTEWPRPVLESAAAHVASYAPKA
EEECCCCCCCCEEEEECCHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH
MAHGGAVAVRARQGMEDEAALDLDVLPQRLGEAWGETPWDDVKAVIRAEARERFAAMPHG
HHCCCEEEEEHHCCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
RVTDRDAAENQDPSQM
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA