| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220903554
Identifier: 220903554
GI number: 220903554
Start: 316286
End: 317536
Strand: Direct
Name: 220903554
Synonym: Ddes_0273
Alternate gene names: NA
Gene position: 316286-317536 (Clockwise)
Preceding gene: 220903553
Following gene: 220903557
Centisome position: 11.01
GC content: 43.65
Gene sequence:
>1251_bases ATGTTGCCTCAAAATTTTGTACCTCAAAAACCCTTTGCGGATTTCAAATGGAAATGGGCCAGCCTACAATGCACAGAGAG CCTGAACGACCCAGTAGTCTTGCTGGGTGTTCTTTTCCGGATGCGGAAACTTGAGCCGCATGGGTATAAGTATAGCTCCC CTGAATTTGCAGCAGAATTACAGGGCTTATCAAACGATATTCAAGACTCTATTGGCGTAGATTTGGCCCGTAGAACGGGA GAGCGTAACCTTATCCGCAACTCTGGGCAATATTGGCGTGCAGTTGGCCTGTTGTCGGATGATCGTTCAGGAAAAATCCA GCTAACAGAGTTTGGACGGCGTGTTGCTGACCATGATATTTCCCAAACGGAATTTGCAGCTATTACTATTCAGACATTTA AGCTGCCAAACGTACAAATCCAAAGCAATGAAGAATGCCAAGAATGGATTGATCATAGTTTGGTTATCTATCCATTACGA CTGATATTAACGATTGTTCGTGAGCTATACAAGATGGGCCAAGGATGCATTACTCCAGACGAGTTAATACACATCATAAT TCCTTTATCTGGAGTGAAAGCTGAACTTCAAGACTATGTTAATTTCATTCTTTGGTTTAGGGCTAAAGAGATAACATTAA TCGGCTGGCCAGATTGTGCACCACGCGACAACGACGAGCGCATTGCCAGAGAGTACCTGCTTTTTCTGTCAAATTATGGC TATCTCAACAAACACAACGGCACAACCCGCTGGAGTGAGAACTATCAGTATAACTATGAGTTAGATGCAGAAATTGAGGC GATCCTTGCCGAACCGCCTAGGGATGAGAGCTTGCAGGAGGCGTTGCAGCAAATCAGGACGACAGACATTGCATCGGAAA TAGAAAGAAAGAGAGTTGGTTCTCAACGGATATCCAGGCCAAACCAAGCTCGTTTCAGAAAAGAAGTTTTGAGGGCGTGT GAGCGTTGTTTAATTACAAATGTTACAATGCCAGAAGTCTTAGAAGCTGCGCATATAAAACCATTTAAGTACAATGGTGA AGATACTATTGCAAACGGGTTTGCTATGAGAATGGATATACATTTGCTGTTTGACGCTGGACATCTTCGTATATCAGATG CAGGGGAAGTATATCTCTCCACTCGTGCGAGAATGGACTATGGGGCAACAATACCGCCAAGGATTGTTCTGCCTGGTTAT ACAAATTTGGACTTTATCCGTTGGCGGTGGGATAATTACAACGGAATTTGA
Upstream 100 bases:
>100_bases AACCGTTCTTCTGTTTACCGGCAGGTAGGCAATGCCGTGCCTCCTCTTTTAGCATACGCGATGGCGAAGCAATTTAACCA ATATGCGTGCGAGTAACGTT
Downstream 100 bases:
>100_bases TTAAAGCTTCATTGTGTTGTAAACCTCCCCAAGTTAGTGCCACCCGAAGGTAGAGACTTTCTGGGGTGAATTGATTTCCA AATACTCAGCCGGAGGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MLPQNFVPQKPFADFKWKWASLQCTESLNDPVVLLGVLFRMRKLEPHGYKYSSPEFAAELQGLSNDIQDSIGVDLARRTG ERNLIRNSGQYWRAVGLLSDDRSGKIQLTEFGRRVADHDISQTEFAAITIQTFKLPNVQIQSNEECQEWIDHSLVIYPLR LILTIVRELYKMGQGCITPDELIHIIIPLSGVKAELQDYVNFILWFRAKEITLIGWPDCAPRDNDERIAREYLLFLSNYG YLNKHNGTTRWSENYQYNYELDAEIEAILAEPPRDESLQEALQQIRTTDIASEIERKRVGSQRISRPNQARFRKEVLRAC ERCLITNVTMPEVLEAAHIKPFKYNGEDTIANGFAMRMDIHLLFDAGHLRISDAGEVYLSTRARMDYGATIPPRIVLPGY TNLDFIRWRWDNYNGI
Sequences:
>Translated_416_residues MLPQNFVPQKPFADFKWKWASLQCTESLNDPVVLLGVLFRMRKLEPHGYKYSSPEFAAELQGLSNDIQDSIGVDLARRTG ERNLIRNSGQYWRAVGLLSDDRSGKIQLTEFGRRVADHDISQTEFAAITIQTFKLPNVQIQSNEECQEWIDHSLVIYPLR LILTIVRELYKMGQGCITPDELIHIIIPLSGVKAELQDYVNFILWFRAKEITLIGWPDCAPRDNDERIAREYLLFLSNYG YLNKHNGTTRWSENYQYNYELDAEIEAILAEPPRDESLQEALQQIRTTDIASEIERKRVGSQRISRPNQARFRKEVLRAC ERCLITNVTMPEVLEAAHIKPFKYNGEDTIANGFAMRMDIHLLFDAGHLRISDAGEVYLSTRARMDYGATIPPRIVLPGY TNLDFIRWRWDNYNGI >Mature_416_residues MLPQNFVPQKPFADFKWKWASLQCTESLNDPVVLLGVLFRMRKLEPHGYKYSSPEFAAELQGLSNDIQDSIGVDLARRTG ERNLIRNSGQYWRAVGLLSDDRSGKIQLTEFGRRVADHDISQTEFAAITIQTFKLPNVQIQSNEECQEWIDHSLVIYPLR LILTIVRELYKMGQGCITPDELIHIIIPLSGVKAELQDYVNFILWFRAKEITLIGWPDCAPRDNDERIAREYLLFLSNYG YLNKHNGTTRWSENYQYNYELDAEIEAILAEPPRDESLQEALQQIRTTDIASEIERKRVGSQRISRPNQARFRKEVLRAC ERCLITNVTMPEVLEAAHIKPFKYNGEDTIANGFAMRMDIHLLFDAGHLRISDAGEVYLSTRARMDYGATIPPRIVLPGY TNLDFIRWRWDNYNGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48134; Mature: 48134
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPQNFVPQKPFADFKWKWASLQCTESLNDPVVLLGVLFRMRKLEPHGYKYSSPEFAAEL CCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH QGLSNDIQDSIGVDLARRTGERNLIRNSGQYWRAVGLLSDDRSGKIQLTEFGRRVADHDI HHHHHHHHHHHCHHHHHHCCCHHHHHCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHCCC SQTEFAAITIQTFKLPNVQIQSNEECQEWIDHSLVIYPLRLILTIVRELYKMGQGCITPD CCCEEEEEEEEEEECCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHH ELIHIIIPLSGVKAELQDYVNFILWFRAKEITLIGWPDCAPRDNDERIAREYLLFLSNYG HHEEEEEECCCHHHHHHHHHHHHHHEEECEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC YLNKHNGTTRWSENYQYNYELDAEIEAILAEPPRDESLQEALQQIRTTDIASEIERKRVG CEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SQRISRPNQARFRKEVLRACERCLITNVTMPEVLEAAHIKPFKYNGEDTIANGFAMRMDI HHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCHHCCCEEEEEEE HLLFDAGHLRISDAGEVYLSTRARMDYGATIPPRIVLPGYTNLDFIRWRWDNYNGI EEEEECCEEEECCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCC >Mature Secondary Structure MLPQNFVPQKPFADFKWKWASLQCTESLNDPVVLLGVLFRMRKLEPHGYKYSSPEFAAEL CCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH QGLSNDIQDSIGVDLARRTGERNLIRNSGQYWRAVGLLSDDRSGKIQLTEFGRRVADHDI HHHHHHHHHHHCHHHHHHCCCHHHHHCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHCCC SQTEFAAITIQTFKLPNVQIQSNEECQEWIDHSLVIYPLRLILTIVRELYKMGQGCITPD CCCEEEEEEEEEEECCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHH ELIHIIIPLSGVKAELQDYVNFILWFRAKEITLIGWPDCAPRDNDERIAREYLLFLSNYG HHEEEEEECCCHHHHHHHHHHHHHHEEECEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC YLNKHNGTTRWSENYQYNYELDAEIEAILAEPPRDESLQEALQQIRTTDIASEIERKRVG CEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SQRISRPNQARFRKEVLRACERCLITNVTMPEVLEAAHIKPFKYNGEDTIANGFAMRMDI HHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCHHCCCEEEEEEE HLLFDAGHLRISDAGEVYLSTRARMDYGATIPPRIVLPGYTNLDFIRWRWDNYNGI EEEEECCEEEECCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA