Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220903520

Identifier: 220903520

GI number: 220903520

Start: 286741

End: 288588

Strand: Reverse

Name: 220903520

Synonym: Ddes_0239

Alternate gene names: NA

Gene position: 288588-286741 (Counterclockwise)

Preceding gene: 220903545

Following gene: 220903519

Centisome position: 10.04

GC content: 58.28

Gene sequence:

>1848_bases
ATGCCTGAACCTGATACGGACAGAAAACAAGGTCAAAATGACCCAAAATCACAGCCGCCCCGCCGCCGTTACCCCGAGGA
AGTGAAGAGTGCCGCCCGGAGCCTTTTTTTGCGCCACTGGAAGGTGGCAGAAGTAGCGGAAACCCTGGGCGTGCCTGAGC
GCACCATTTATGACTGGTCGGTAAAAGGGGCATGGCTTGATCTTTTGAGCCATGAGGGACCAGACGAGGCCATAAACCGC
CGCCTTGAAGTGCTGGTGGGGCGTGACAACAAAACGCAGGCCGAGCTGCGCGAGATTGACCTGCTCATATCAAGTCAGGA
GCGCCGCCTGCGCATGCGTGAGCGTGAACAGGCCCAGGCGGCCACAGTTGGGCAAAGCGGAGAAGCAGCAGGAGGCCGGG
AACGGGAGAACCCCTTTCACGGCGGCACAACCGCCAAAAAGAGCGGCAAAAAAAGCCGGAAAAAGAACGATGTTTCGCAC
CTGACCGCCGAGGATTTTAAGGAACGGCTGCACAAACGCTTTTTTGCCTACCAGCGGGAAATTAGCGCCACAAAAGAGCA
CCGGAACCGCATGTTTTTGAAGGCCCGCCAGTTGGGTTTTACATGGTTTTTCGCGCAGGAGGCCTTTGAAGACGCGGTGC
TGAACGGGGATAACCAGATATTTCTTTCAGCAACCAGGGCGCAGAGCGAAATATTTTTGCACTACATACGCGACATTTGC
GGCGAAGCCTTTGACATTGAGCTCAAGGGCAACCCGCTGGTGCTGCATACTGCAAAAGGGCCGGCCACCCTGTATTTTCT
GGCAACATCGTCCAGATCGGCCCAGGGTTATCACGGGCATGTGTATGGCGACGAATTTTTCTGGATGCCAAAGTTCAAAG
AATTTTGGAAAGTGGCCAGCGGCATGGCCGCGCATGCCAAATGGCGGCGCACCATGTTTTCAACGCCGTCAATCATCACG
CATGAGGCCTATCCGCGCTGGAGCGGCAAGGAATACCTTTCGCGCTTCAAAAATCCCGCACCTTGGCCGGACAAAGCAGC
ACTGCGCCAGGGGCTGATATGCCCGGACAATACCTACCGCCGCATTGTCACCCTTGACGATGCCGAGGCCGGTGGCTGTA
ACCTGTTCAACCGGGCCGATCTGGAGCAGGAATACAGCCCCGAGGATATGCGCCAGCTTTTCGGCTGCGAATTTATTGAC
GACACCTTGGCCGTCTTTTTGTTGGGCCTGCTTGAAGGCTGCATGGAAGACCCGGACGGATGGGGCATTGATTTGCGCCA
GGCCCGCCCGGTGGACAATGCCGGGGTATGGGGCGGGTACGACCCCTCGCGCACGCGGGATGACGCCAGCTTTGTTGTGC
TGCTGCCGCCGCAAAAGGCAGGCGACAAGATACGCACGCTGGAGCGCCACACCTGGAAGGGCAAAAGCTATTTGTGGCAG
GTTGGCCGCATACGCGAGCTGCACGATAAATACCGCTTTCAGCACATGGGCATTGACGTAACCGGCCCGGGGCAGGCCGT
GCTTGAAAATGTGCGCCTGTTCTGCCCTGTTGCCATGCCCATAACCTACAGCCTTGCAACCAAGGCCGCCCTAGTGCTGA
AGGCGCTTGAAGTGATGGAGCAAAAGCGCCTTGCATGGGATGCCGCGCAAACAGACATTGCCCACGCCTTCATGACCATA
CGGCAGGTGGCCACGCCCAGCGGGCAAATAACCTATGCCGCCCACAGAACAGACACCACAGGCCATGCGGACGTGGCCTG
GGCCATCATGCACGCCCTGGCCGCCGAGCCGCTGGCGCGGCAGTCGCGGGCCGGGGGCAAAACAAGCTCGCTGGCATTCA
GCTCATAA

Upstream 100 bases:

>100_bases
ACACAAAGCAGGTGGATAGGTCAAAACATCTTGGTTGTAAAAAGGTAATCTACAATTAAAATATGGAGAATATGACTGTT
TATAATGATAATCAGGTTTT

Downstream 100 bases:

>100_bases
AGGAAGCTACATGAAAAAACACAAAAAGCGGCCCGGCGGGCAGCATGCGGCGGATACTACGGGCGGCAAAAGCCGGGCCA
TAGCTTTCAGTTTTGGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Mu-Like Prophage FluMu Protein Gp; Prophage; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Prophage Large Terminase Protein; Fels-2 Prophage Protein; Phage Terminase Subunit GpP; Terminase Large Subunit; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Terminase Related Protein; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase

Number of amino acids: Translated: 615; Mature: 614

Protein sequence:

>615_residues
MPEPDTDRKQGQNDPKSQPPRRRYPEEVKSAARSLFLRHWKVAEVAETLGVPERTIYDWSVKGAWLDLLSHEGPDEAINR
RLEVLVGRDNKTQAELREIDLLISSQERRLRMREREQAQAATVGQSGEAAGGRERENPFHGGTTAKKSGKKSRKKNDVSH
LTAEDFKERLHKRFFAYQREISATKEHRNRMFLKARQLGFTWFFAQEAFEDAVLNGDNQIFLSATRAQSEIFLHYIRDIC
GEAFDIELKGNPLVLHTAKGPATLYFLATSSRSAQGYHGHVYGDEFFWMPKFKEFWKVASGMAAHAKWRRTMFSTPSIIT
HEAYPRWSGKEYLSRFKNPAPWPDKAALRQGLICPDNTYRRIVTLDDAEAGGCNLFNRADLEQEYSPEDMRQLFGCEFID
DTLAVFLLGLLEGCMEDPDGWGIDLRQARPVDNAGVWGGYDPSRTRDDASFVVLLPPQKAGDKIRTLERHTWKGKSYLWQ
VGRIRELHDKYRFQHMGIDVTGPGQAVLENVRLFCPVAMPITYSLATKAALVLKALEVMEQKRLAWDAAQTDIAHAFMTI
RQVATPSGQITYAAHRTDTTGHADVAWAIMHALAAEPLARQSRAGGKTSSLAFSS

Sequences:

>Translated_615_residues
MPEPDTDRKQGQNDPKSQPPRRRYPEEVKSAARSLFLRHWKVAEVAETLGVPERTIYDWSVKGAWLDLLSHEGPDEAINR
RLEVLVGRDNKTQAELREIDLLISSQERRLRMREREQAQAATVGQSGEAAGGRERENPFHGGTTAKKSGKKSRKKNDVSH
LTAEDFKERLHKRFFAYQREISATKEHRNRMFLKARQLGFTWFFAQEAFEDAVLNGDNQIFLSATRAQSEIFLHYIRDIC
GEAFDIELKGNPLVLHTAKGPATLYFLATSSRSAQGYHGHVYGDEFFWMPKFKEFWKVASGMAAHAKWRRTMFSTPSIIT
HEAYPRWSGKEYLSRFKNPAPWPDKAALRQGLICPDNTYRRIVTLDDAEAGGCNLFNRADLEQEYSPEDMRQLFGCEFID
DTLAVFLLGLLEGCMEDPDGWGIDLRQARPVDNAGVWGGYDPSRTRDDASFVVLLPPQKAGDKIRTLERHTWKGKSYLWQ
VGRIRELHDKYRFQHMGIDVTGPGQAVLENVRLFCPVAMPITYSLATKAALVLKALEVMEQKRLAWDAAQTDIAHAFMTI
RQVATPSGQITYAAHRTDTTGHADVAWAIMHALAAEPLARQSRAGGKTSSLAFSS
>Mature_614_residues
PEPDTDRKQGQNDPKSQPPRRRYPEEVKSAARSLFLRHWKVAEVAETLGVPERTIYDWSVKGAWLDLLSHEGPDEAINRR
LEVLVGRDNKTQAELREIDLLISSQERRLRMREREQAQAATVGQSGEAAGGRERENPFHGGTTAKKSGKKSRKKNDVSHL
TAEDFKERLHKRFFAYQREISATKEHRNRMFLKARQLGFTWFFAQEAFEDAVLNGDNQIFLSATRAQSEIFLHYIRDICG
EAFDIELKGNPLVLHTAKGPATLYFLATSSRSAQGYHGHVYGDEFFWMPKFKEFWKVASGMAAHAKWRRTMFSTPSIITH
EAYPRWSGKEYLSRFKNPAPWPDKAALRQGLICPDNTYRRIVTLDDAEAGGCNLFNRADLEQEYSPEDMRQLFGCEFIDD
TLAVFLLGLLEGCMEDPDGWGIDLRQARPVDNAGVWGGYDPSRTRDDASFVVLLPPQKAGDKIRTLERHTWKGKSYLWQV
GRIRELHDKYRFQHMGIDVTGPGQAVLENVRLFCPVAMPITYSLATKAALVLKALEVMEQKRLAWDAAQTDIAHAFMTIR
QVATPSGQITYAAHRTDTTGHADVAWAIMHALAAEPLARQSRAGGKTSSLAFSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69730; Mature: 69598

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEPDTDRKQGQNDPKSQPPRRRYPEEVKSAARSLFLRHWKVAEVAETLGVPERTIYDWS
CCCCCCCHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
VKGAWLDLLSHEGPDEAINRRLEVLVGRDNKTQAELREIDLLISSQERRLRMREREQAQA
CCHHHHHHHCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ATVGQSGEAAGGRERENPFHGGTTAKKSGKKSRKKNDVSHLTAEDFKERLHKRFFAYQRE
HHCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ISATKEHRNRMFLKARQLGFTWFFAQEAFEDAVLNGDNQIFLSATRAQSEIFLHYIRDIC
HHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHC
GEAFDIELKGNPLVLHTAKGPATLYFLATSSRSAQGYHGHVYGDEFFWMPKFKEFWKVAS
CCEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEECCCEEECCHHHHHHHHHC
GMAAHAKWRRTMFSTPSIITHEAYPRWSGKEYLSRFKNPAPWPDKAALRQGLICPDNTYR
CHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCE
RIVTLDDAEAGGCNLFNRADLEQEYSPEDMRQLFGCEFIDDTLAVFLLGLLEGCMEDPDG
EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
WGIDLRQARPVDNAGVWGGYDPSRTRDDASFVVLLPPQKAGDKIRTLERHTWKGKSYLWQ
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHH
VGRIRELHDKYRFQHMGIDVTGPGQAVLENVRLFCPVAMPITYSLATKAALVLKALEVME
HHHHHHHHHHHHHHHCCEEECCCCHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHH
QKRLAWDAAQTDIAHAFMTIRQVATPSGQITYAAHRTDTTGHADVAWAIMHALAAEPLAR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHH
QSRAGGKTSSLAFSS
HHHCCCCCCCCCCCC
>Mature Secondary Structure 
PEPDTDRKQGQNDPKSQPPRRRYPEEVKSAARSLFLRHWKVAEVAETLGVPERTIYDWS
CCCCCCHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
VKGAWLDLLSHEGPDEAINRRLEVLVGRDNKTQAELREIDLLISSQERRLRMREREQAQA
CCHHHHHHHCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ATVGQSGEAAGGRERENPFHGGTTAKKSGKKSRKKNDVSHLTAEDFKERLHKRFFAYQRE
HHCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ISATKEHRNRMFLKARQLGFTWFFAQEAFEDAVLNGDNQIFLSATRAQSEIFLHYIRDIC
HHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHC
GEAFDIELKGNPLVLHTAKGPATLYFLATSSRSAQGYHGHVYGDEFFWMPKFKEFWKVAS
CCEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEECCCEEECCHHHHHHHHHC
GMAAHAKWRRTMFSTPSIITHEAYPRWSGKEYLSRFKNPAPWPDKAALRQGLICPDNTYR
CHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCE
RIVTLDDAEAGGCNLFNRADLEQEYSPEDMRQLFGCEFIDDTLAVFLLGLLEGCMEDPDG
EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
WGIDLRQARPVDNAGVWGGYDPSRTRDDASFVVLLPPQKAGDKIRTLERHTWKGKSYLWQ
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHH
VGRIRELHDKYRFQHMGIDVTGPGQAVLENVRLFCPVAMPITYSLATKAALVLKALEVME
HHHHHHHHHHHHHHHCCEEECCCCHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHH
QKRLAWDAAQTDIAHAFMTIRQVATPSGQITYAAHRTDTTGHADVAWAIMHALAAEPLAR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHH
QSRAGGKTSSLAFSS
HHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA