| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903520
Identifier: 220903520
GI number: 220903520
Start: 286741
End: 288588
Strand: Reverse
Name: 220903520
Synonym: Ddes_0239
Alternate gene names: NA
Gene position: 288588-286741 (Counterclockwise)
Preceding gene: 220903545
Following gene: 220903519
Centisome position: 10.04
GC content: 58.28
Gene sequence:
>1848_bases ATGCCTGAACCTGATACGGACAGAAAACAAGGTCAAAATGACCCAAAATCACAGCCGCCCCGCCGCCGTTACCCCGAGGA AGTGAAGAGTGCCGCCCGGAGCCTTTTTTTGCGCCACTGGAAGGTGGCAGAAGTAGCGGAAACCCTGGGCGTGCCTGAGC GCACCATTTATGACTGGTCGGTAAAAGGGGCATGGCTTGATCTTTTGAGCCATGAGGGACCAGACGAGGCCATAAACCGC CGCCTTGAAGTGCTGGTGGGGCGTGACAACAAAACGCAGGCCGAGCTGCGCGAGATTGACCTGCTCATATCAAGTCAGGA GCGCCGCCTGCGCATGCGTGAGCGTGAACAGGCCCAGGCGGCCACAGTTGGGCAAAGCGGAGAAGCAGCAGGAGGCCGGG AACGGGAGAACCCCTTTCACGGCGGCACAACCGCCAAAAAGAGCGGCAAAAAAAGCCGGAAAAAGAACGATGTTTCGCAC CTGACCGCCGAGGATTTTAAGGAACGGCTGCACAAACGCTTTTTTGCCTACCAGCGGGAAATTAGCGCCACAAAAGAGCA CCGGAACCGCATGTTTTTGAAGGCCCGCCAGTTGGGTTTTACATGGTTTTTCGCGCAGGAGGCCTTTGAAGACGCGGTGC TGAACGGGGATAACCAGATATTTCTTTCAGCAACCAGGGCGCAGAGCGAAATATTTTTGCACTACATACGCGACATTTGC GGCGAAGCCTTTGACATTGAGCTCAAGGGCAACCCGCTGGTGCTGCATACTGCAAAAGGGCCGGCCACCCTGTATTTTCT GGCAACATCGTCCAGATCGGCCCAGGGTTATCACGGGCATGTGTATGGCGACGAATTTTTCTGGATGCCAAAGTTCAAAG AATTTTGGAAAGTGGCCAGCGGCATGGCCGCGCATGCCAAATGGCGGCGCACCATGTTTTCAACGCCGTCAATCATCACG CATGAGGCCTATCCGCGCTGGAGCGGCAAGGAATACCTTTCGCGCTTCAAAAATCCCGCACCTTGGCCGGACAAAGCAGC ACTGCGCCAGGGGCTGATATGCCCGGACAATACCTACCGCCGCATTGTCACCCTTGACGATGCCGAGGCCGGTGGCTGTA ACCTGTTCAACCGGGCCGATCTGGAGCAGGAATACAGCCCCGAGGATATGCGCCAGCTTTTCGGCTGCGAATTTATTGAC GACACCTTGGCCGTCTTTTTGTTGGGCCTGCTTGAAGGCTGCATGGAAGACCCGGACGGATGGGGCATTGATTTGCGCCA GGCCCGCCCGGTGGACAATGCCGGGGTATGGGGCGGGTACGACCCCTCGCGCACGCGGGATGACGCCAGCTTTGTTGTGC TGCTGCCGCCGCAAAAGGCAGGCGACAAGATACGCACGCTGGAGCGCCACACCTGGAAGGGCAAAAGCTATTTGTGGCAG GTTGGCCGCATACGCGAGCTGCACGATAAATACCGCTTTCAGCACATGGGCATTGACGTAACCGGCCCGGGGCAGGCCGT GCTTGAAAATGTGCGCCTGTTCTGCCCTGTTGCCATGCCCATAACCTACAGCCTTGCAACCAAGGCCGCCCTAGTGCTGA AGGCGCTTGAAGTGATGGAGCAAAAGCGCCTTGCATGGGATGCCGCGCAAACAGACATTGCCCACGCCTTCATGACCATA CGGCAGGTGGCCACGCCCAGCGGGCAAATAACCTATGCCGCCCACAGAACAGACACCACAGGCCATGCGGACGTGGCCTG GGCCATCATGCACGCCCTGGCCGCCGAGCCGCTGGCGCGGCAGTCGCGGGCCGGGGGCAAAACAAGCTCGCTGGCATTCA GCTCATAA
Upstream 100 bases:
>100_bases ACACAAAGCAGGTGGATAGGTCAAAACATCTTGGTTGTAAAAAGGTAATCTACAATTAAAATATGGAGAATATGACTGTT TATAATGATAATCAGGTTTT
Downstream 100 bases:
>100_bases AGGAAGCTACATGAAAAAACACAAAAAGCGGCCCGGCGGGCAGCATGCGGCGGATACTACGGGCGGCAAAAGCCGGGCCA TAGCTTTCAGTTTTGGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Mu-Like Prophage FluMu Protein Gp; Prophage; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Prophage Large Terminase Protein; Fels-2 Prophage Protein; Phage Terminase Subunit GpP; Terminase Large Subunit; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Terminase Related Protein; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MPEPDTDRKQGQNDPKSQPPRRRYPEEVKSAARSLFLRHWKVAEVAETLGVPERTIYDWSVKGAWLDLLSHEGPDEAINR RLEVLVGRDNKTQAELREIDLLISSQERRLRMREREQAQAATVGQSGEAAGGRERENPFHGGTTAKKSGKKSRKKNDVSH LTAEDFKERLHKRFFAYQREISATKEHRNRMFLKARQLGFTWFFAQEAFEDAVLNGDNQIFLSATRAQSEIFLHYIRDIC GEAFDIELKGNPLVLHTAKGPATLYFLATSSRSAQGYHGHVYGDEFFWMPKFKEFWKVASGMAAHAKWRRTMFSTPSIIT HEAYPRWSGKEYLSRFKNPAPWPDKAALRQGLICPDNTYRRIVTLDDAEAGGCNLFNRADLEQEYSPEDMRQLFGCEFID DTLAVFLLGLLEGCMEDPDGWGIDLRQARPVDNAGVWGGYDPSRTRDDASFVVLLPPQKAGDKIRTLERHTWKGKSYLWQ VGRIRELHDKYRFQHMGIDVTGPGQAVLENVRLFCPVAMPITYSLATKAALVLKALEVMEQKRLAWDAAQTDIAHAFMTI RQVATPSGQITYAAHRTDTTGHADVAWAIMHALAAEPLARQSRAGGKTSSLAFSS
Sequences:
>Translated_615_residues MPEPDTDRKQGQNDPKSQPPRRRYPEEVKSAARSLFLRHWKVAEVAETLGVPERTIYDWSVKGAWLDLLSHEGPDEAINR RLEVLVGRDNKTQAELREIDLLISSQERRLRMREREQAQAATVGQSGEAAGGRERENPFHGGTTAKKSGKKSRKKNDVSH LTAEDFKERLHKRFFAYQREISATKEHRNRMFLKARQLGFTWFFAQEAFEDAVLNGDNQIFLSATRAQSEIFLHYIRDIC GEAFDIELKGNPLVLHTAKGPATLYFLATSSRSAQGYHGHVYGDEFFWMPKFKEFWKVASGMAAHAKWRRTMFSTPSIIT HEAYPRWSGKEYLSRFKNPAPWPDKAALRQGLICPDNTYRRIVTLDDAEAGGCNLFNRADLEQEYSPEDMRQLFGCEFID DTLAVFLLGLLEGCMEDPDGWGIDLRQARPVDNAGVWGGYDPSRTRDDASFVVLLPPQKAGDKIRTLERHTWKGKSYLWQ VGRIRELHDKYRFQHMGIDVTGPGQAVLENVRLFCPVAMPITYSLATKAALVLKALEVMEQKRLAWDAAQTDIAHAFMTI RQVATPSGQITYAAHRTDTTGHADVAWAIMHALAAEPLARQSRAGGKTSSLAFSS >Mature_614_residues PEPDTDRKQGQNDPKSQPPRRRYPEEVKSAARSLFLRHWKVAEVAETLGVPERTIYDWSVKGAWLDLLSHEGPDEAINRR LEVLVGRDNKTQAELREIDLLISSQERRLRMREREQAQAATVGQSGEAAGGRERENPFHGGTTAKKSGKKSRKKNDVSHL TAEDFKERLHKRFFAYQREISATKEHRNRMFLKARQLGFTWFFAQEAFEDAVLNGDNQIFLSATRAQSEIFLHYIRDICG EAFDIELKGNPLVLHTAKGPATLYFLATSSRSAQGYHGHVYGDEFFWMPKFKEFWKVASGMAAHAKWRRTMFSTPSIITH EAYPRWSGKEYLSRFKNPAPWPDKAALRQGLICPDNTYRRIVTLDDAEAGGCNLFNRADLEQEYSPEDMRQLFGCEFIDD TLAVFLLGLLEGCMEDPDGWGIDLRQARPVDNAGVWGGYDPSRTRDDASFVVLLPPQKAGDKIRTLERHTWKGKSYLWQV GRIRELHDKYRFQHMGIDVTGPGQAVLENVRLFCPVAMPITYSLATKAALVLKALEVMEQKRLAWDAAQTDIAHAFMTIR QVATPSGQITYAAHRTDTTGHADVAWAIMHALAAEPLARQSRAGGKTSSLAFSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69730; Mature: 69598
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPDTDRKQGQNDPKSQPPRRRYPEEVKSAARSLFLRHWKVAEVAETLGVPERTIYDWS CCCCCCCHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC VKGAWLDLLSHEGPDEAINRRLEVLVGRDNKTQAELREIDLLISSQERRLRMREREQAQA CCHHHHHHHCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ATVGQSGEAAGGRERENPFHGGTTAKKSGKKSRKKNDVSHLTAEDFKERLHKRFFAYQRE HHCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ISATKEHRNRMFLKARQLGFTWFFAQEAFEDAVLNGDNQIFLSATRAQSEIFLHYIRDIC HHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHC GEAFDIELKGNPLVLHTAKGPATLYFLATSSRSAQGYHGHVYGDEFFWMPKFKEFWKVAS CCEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEECCCEEECCHHHHHHHHHC GMAAHAKWRRTMFSTPSIITHEAYPRWSGKEYLSRFKNPAPWPDKAALRQGLICPDNTYR CHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCE RIVTLDDAEAGGCNLFNRADLEQEYSPEDMRQLFGCEFIDDTLAVFLLGLLEGCMEDPDG EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC WGIDLRQARPVDNAGVWGGYDPSRTRDDASFVVLLPPQKAGDKIRTLERHTWKGKSYLWQ CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHH VGRIRELHDKYRFQHMGIDVTGPGQAVLENVRLFCPVAMPITYSLATKAALVLKALEVME HHHHHHHHHHHHHHHCCEEECCCCHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHH QKRLAWDAAQTDIAHAFMTIRQVATPSGQITYAAHRTDTTGHADVAWAIMHALAAEPLAR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHH QSRAGGKTSSLAFSS HHHCCCCCCCCCCCC >Mature Secondary Structure PEPDTDRKQGQNDPKSQPPRRRYPEEVKSAARSLFLRHWKVAEVAETLGVPERTIYDWS CCCCCCHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC VKGAWLDLLSHEGPDEAINRRLEVLVGRDNKTQAELREIDLLISSQERRLRMREREQAQA CCHHHHHHHCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ATVGQSGEAAGGRERENPFHGGTTAKKSGKKSRKKNDVSHLTAEDFKERLHKRFFAYQRE HHCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ISATKEHRNRMFLKARQLGFTWFFAQEAFEDAVLNGDNQIFLSATRAQSEIFLHYIRDIC HHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHC GEAFDIELKGNPLVLHTAKGPATLYFLATSSRSAQGYHGHVYGDEFFWMPKFKEFWKVAS CCEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEECCCEEECCHHHHHHHHHC GMAAHAKWRRTMFSTPSIITHEAYPRWSGKEYLSRFKNPAPWPDKAALRQGLICPDNTYR CHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCE RIVTLDDAEAGGCNLFNRADLEQEYSPEDMRQLFGCEFIDDTLAVFLLGLLEGCMEDPDG EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC WGIDLRQARPVDNAGVWGGYDPSRTRDDASFVVLLPPQKAGDKIRTLERHTWKGKSYLWQ CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHH VGRIRELHDKYRFQHMGIDVTGPGQAVLENVRLFCPVAMPITYSLATKAALVLKALEVME HHHHHHHHHHHHHHHCCEEECCCCHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHH QKRLAWDAAQTDIAHAFMTIRQVATPSGQITYAAHRTDTTGHADVAWAIMHALAAEPLAR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHH QSRAGGKTSSLAFSS HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA