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The map label for this gene is 220903519

Identifier: 220903519

GI number: 220903519

Start: 285696

End: 286730

Strand: Reverse

Name: 220903519

Synonym: Ddes_0238

Alternate gene names: NA

Gene position: 286730-285696 (Counterclockwise)

Preceding gene: 220903520

Following gene: 220903518

Centisome position: 9.98

GC content: 56.23

Gene sequence:

>1035_bases
ATGAAAAAACACAAAAAGCGGCCCGGCGGGCAGCATGCGGCGGATACTACGGGCGGCAAAAGCCGGGCCATAGCTTTCAG
TTTTGGCGAACCGGAAAGCGTAATGACAGGCGAGCTTTCGCAGTACCTTGGCGTGTATTTGCAGGACAACGGGCAGTATT
ATCAAACGCCCGTGCCCCTGACCGGGCTTGCCCGGCTGCTGCGGGCCAACGCCTACCACTGGCCCATGCTGGAATTTAAG
GTAAACAAGCTGTTGCGGGGCTTTATGGGCAGCGCGGCGCTTGACCGCATAACCATGCGCAAGGCAGCCACAGACTATAT
GGTGTTTGCCAACGCCTATTTGCAACGGCTGTACAACATGTTTGGGCAGGTGGTGGGCTATACCCATCTGGCGGCCATAA
ACATGCGCCGTGCCAAGGCTGACGACCAGTACATCATGCTTGGCGTGGACGGCAGCATGACCACCTTTGAACCGGGCGAA
GTGCTGCACGTTAAAAACTATGACGTGTCGCAAGAAATTTACGGTCTGCCCTCGTACCTGGGGGCCATACAGAGCATGCT
GCTGCAAGAAGACGCCACTCTATTTCGCCGCCGTTATTACCGCAACGGCGCGCACATGGGCTATGTGTTCTATAGCAGCT
CGGCCTATCTGGACCTTGACGATGAAAGCGCCTTGCGCATGGCCATGAAGGAAAGCAAGGGCGTGGGGAACTTTCGCAAC
CTGTTCTTGCACATACCCAACGGCAAGGAAAAAGACATTCAGATACTGCCTGTGGGCGATTTTTCTACCAAGGACGAGTT
GGAAAAAATCAAGAACATATCACGGGACGACATTATCGCGGCCCACCGCATACCGCCCGCCCTGGCCAACATTATACCCT
CGGTAGCCGGGGGCCTGGGCGACATTACAGCGGCGGACGCCGTGTATGTTCAAAACGAGATTGAGCCTTTGCAGGAAGAC
CTGGGCGTGGTGAACGACGACTTGCCGGAACATTTGCGGGTACACTTTGCGCCCGCAACCGCGCCCATGCCTTGA

Upstream 100 bases:

>100_bases
TGGGCCATCATGCACGCCCTGGCCGCCGAGCCGCTGGCGCGGCAGTCGCGGGCCGGGGGCAAAACAAGCTCGCTGGCATT
CAGCTCATAAAGGAAGCTAC

Downstream 100 bases:

>100_bases
CGCAATGGCCTATAACGGCAAAAATGGCCGCATCAGTGGGGAACCTATGCGTATTTATTGCAGCCGTTGCGGGCAGAAAG
CCATTATACGAACCAGCAAA

Product: phage portal protein, PBSX family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKKHKKRPGGQHAADTTGGKSRAIAFSFGEPESVMTGELSQYLGVYLQDNGQYYQTPVPLTGLARLLRANAYHWPMLEFK
VNKLLRGFMGSAALDRITMRKAATDYMVFANAYLQRLYNMFGQVVGYTHLAAINMRRAKADDQYIMLGVDGSMTTFEPGE
VLHVKNYDVSQEIYGLPSYLGAIQSMLLQEDATLFRRRYYRNGAHMGYVFYSSSAYLDLDDESALRMAMKESKGVGNFRN
LFLHIPNGKEKDIQILPVGDFSTKDELEKIKNISRDDIIAAHRIPPALANIIPSVAGGLGDITAADAVYVQNEIEPLQED
LGVVNDDLPEHLRVHFAPATAPMP

Sequences:

>Translated_344_residues
MKKHKKRPGGQHAADTTGGKSRAIAFSFGEPESVMTGELSQYLGVYLQDNGQYYQTPVPLTGLARLLRANAYHWPMLEFK
VNKLLRGFMGSAALDRITMRKAATDYMVFANAYLQRLYNMFGQVVGYTHLAAINMRRAKADDQYIMLGVDGSMTTFEPGE
VLHVKNYDVSQEIYGLPSYLGAIQSMLLQEDATLFRRRYYRNGAHMGYVFYSSSAYLDLDDESALRMAMKESKGVGNFRN
LFLHIPNGKEKDIQILPVGDFSTKDELEKIKNISRDDIIAAHRIPPALANIIPSVAGGLGDITAADAVYVQNEIEPLQED
LGVVNDDLPEHLRVHFAPATAPMP
>Mature_344_residues
MKKHKKRPGGQHAADTTGGKSRAIAFSFGEPESVMTGELSQYLGVYLQDNGQYYQTPVPLTGLARLLRANAYHWPMLEFK
VNKLLRGFMGSAALDRITMRKAATDYMVFANAYLQRLYNMFGQVVGYTHLAAINMRRAKADDQYIMLGVDGSMTTFEPGE
VLHVKNYDVSQEIYGLPSYLGAIQSMLLQEDATLFRRRYYRNGAHMGYVFYSSSAYLDLDDESALRMAMKESKGVGNFRN
LFLHIPNGKEKDIQILPVGDFSTKDELEKIKNISRDDIIAAHRIPPALANIIPSVAGGLGDITAADAVYVQNEIEPLQED
LGVVNDDLPEHLRVHFAPATAPMP

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 38364; Mature: 38364

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHKKRPGGQHAADTTGGKSRAIAFSFGEPESVMTGELSQYLGVYLQDNGQYYQTPVPL
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEECCCCEEECCCCH
TGLARLLRANAYHWPMLEFKVNKLLRGFMGSAALDRITMRKAATDYMVFANAYLQRLYNM
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGQVVGYTHLAAINMRRAKADDQYIMLGVDGSMTTFEPGEVLHVKNYDVSQEIYGLPSYL
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEECCCCEEEEECCCCHHHHHCCHHHH
GAIQSMLLQEDATLFRRRYYRNGAHMGYVFYSSSAYLDLDDESALRMAMKESKGVGNFRN
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCHHHHHHHHHHCCCCCCEEE
LFLHIPNGKEKDIQILPVGDFSTKDELEKIKNISRDDIIAAHRIPPALANIIPSVAGGLG
EEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHEEEHHCCCHHHHHHHHHHHCCCC
DITAADAVYVQNEIEPLQEDLGVVNDDLPEHLRVHFAPATAPMP
CCCHHHHEEEHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCC
>Mature Secondary Structure
MKKHKKRPGGQHAADTTGGKSRAIAFSFGEPESVMTGELSQYLGVYLQDNGQYYQTPVPL
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEECCCCEEECCCCH
TGLARLLRANAYHWPMLEFKVNKLLRGFMGSAALDRITMRKAATDYMVFANAYLQRLYNM
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGQVVGYTHLAAINMRRAKADDQYIMLGVDGSMTTFEPGEVLHVKNYDVSQEIYGLPSYL
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEECCCCEEEEECCCCHHHHHCCHHHH
GAIQSMLLQEDATLFRRRYYRNGAHMGYVFYSSSAYLDLDDESALRMAMKESKGVGNFRN
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEECCCHHHHHHHHHHCCCCCCEEE
LFLHIPNGKEKDIQILPVGDFSTKDELEKIKNISRDDIIAAHRIPPALANIIPSVAGGLG
EEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHEEEHHCCCHHHHHHHHHHHCCCC
DITAADAVYVQNEIEPLQEDLGVVNDDLPEHLRVHFAPATAPMP
CCCHHHHEEEHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]