| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220903486
Identifier: 220903486
GI number: 220903486
Start: 254051
End: 254338
Strand: Reverse
Name: 220903486
Synonym: Ddes_0204
Alternate gene names: NA
Gene position: 254338-254051 (Counterclockwise)
Preceding gene: 220903487
Following gene: 220903480
Centisome position: 8.85
GC content: 62.5
Gene sequence:
>288_bases ATGCACGGCCCGCGCGGAACCGCGGAGGATGCCGTTATCATGACCGTGGACCAGTATGAAACTCTGCGCCTCATTGACCT TGAAAGCATGACCCAGGAGGCCTGCGCCGAGAACATGCACATTGCCCGCACCACCGTGCAGAGCATTTATGCCGAGGCGC GTAAAAAGCTGGCGGATGCACTGGTCAACGGCAAAATGCTGCACATTGAAGGCGGAGAATACAGGCTGTGCAACGGCGAT GGCGCGCAGTGCGGCGGGGGCGGCTGCCGCCGGGGCCGGAACCGGTAG
Upstream 100 bases:
>100_bases CGGCCCTGCGGCCAATGCCCAGGGTTCTGATACAGCATTTACCTGCGGGCCGGAACCGGGACGCGGCCAGGGCCGGGGAG GCCGCCACAGAGGGCATGAT
Downstream 100 bases:
>100_bases CCGGACGGCCCTGCCTTGCCGCCTGCGTTGCCCACGATCCCGGGCAACGGGCTGCGGACAAAGGCTGCCGGCCCGTAGCG GCCTCAGGCCCTTTCTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MHGPRGTAEDAVIMTVDQYETLRLIDLESMTQEACAENMHIARTTVQSIYAEARKKLADALVNGKMLHIEGGEYRLCNGD GAQCGGGGCRRGRNR
Sequences:
>Translated_95_residues MHGPRGTAEDAVIMTVDQYETLRLIDLESMTQEACAENMHIARTTVQSIYAEARKKLADALVNGKMLHIEGGEYRLCNGD GAQCGGGGCRRGRNR >Mature_95_residues MHGPRGTAEDAVIMTVDQYETLRLIDLESMTQEACAENMHIARTTVQSIYAEARKKLADALVNGKMLHIEGGEYRLCNGD GAQCGGGGCRRGRNR
Specific function: Unknown
COG id: COG1342
COG function: function code R; Predicted DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0251 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013324 - InterPro: IPR002852 [H]
Pfam domain/function: PF02001 DUF134 [H]
EC number: NA
Molecular weight: Translated: 10383; Mature: 10383
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGPRGTAEDAVIMTVDQYETLRLIDLESMTQEACAENMHIARTTVQSIYAEARKKLADA CCCCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LVNGKMLHIEGGEYRLCNGDGAQCGGGGCRRGRNR HHCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHGPRGTAEDAVIMTVDQYETLRLIDLESMTQEACAENMHIARTTVQSIYAEARKKLADA CCCCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LVNGKMLHIEGGEYRLCNGDGAQCGGGGCRRGRNR HHCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA