| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is fba [H]
Identifier: 220903417
GI number: 220903417
Start: 167914
End: 168840
Strand: Direct
Name: fba [H]
Synonym: Ddes_0131
Alternate gene names: 220903417
Gene position: 167914-168840 (Clockwise)
Preceding gene: 220903416
Following gene: 220903418
Centisome position: 5.84
GC content: 59.44
Gene sequence:
>927_bases ATGCCTCTTATCAGTCCCAAAGAAATGTTTGCCGCCGCCTATGCCGGCGGTTATGCCATTGGCGCTTTCAACGTCAACAA TATGGAAATCATCCAGGGCATCATGGGCGCGGCTTCCGAGGAAAAATCGCCTGTCATTCTTCAGGTGTCGGCGGGCGCGC GCAAATACGCGGGGCAGCCCTACATCATGAAGCTGGTGGAAGCCGCCCTGGCCGTTGACGCCAGCGTACCCGTGGCGGTG CACCTTGACCACGGCCCCAGTTTTGAAATGTGCCGCGAATGTATCGACGGCGGATTTACTTCCGTCATGATCGACGGCTC GCATCTGCCCTACGAAGAAAATATCGCCCTCACCAAACAGGTGGTGGACTACGCCCGCCCCCGCGGCGTGTGGGTCGAAG CTGAACTGGGCAAACTGGCGGGCATTGAAGAGCATGTGCAGTCGGACGAGCACGTTTATACCGACCCTGACGAAGCTGTG GACTTTGTGGAGCGCACCGGCTGCGATTCGCTCGCCATAGCCATCGGCACAAGCCACGGCGCGTACAAGTTCAAGGGCGA GCCCAAGCTGGACTTTGAACGCCTTGAGGCCATCTGCAGGAAGCTGCCGGACTATCCGCTGGTGCTGCACGGTGCTTCCA GCGTACCGCAGGAGTTTGTGGACCTGTGCAACCAGTACGGCGGCAATGTGGGCGGCGCCAGAGGCGTACCCGAAGACATG CTGCGCAGGGCCGCCGGTATGGGCGTGTGCAAGATCAACGTGGATACGGATATCCGCCTGGCGGTTACGGCCTGCATCCG CCAGTATCTGGCTGAACATCCCGAAGAATTTGACCCCCGGTCCTATCTCAAGCCGGCCCGGGAAGCTGTAAGGCAAATGG TGGCGCACAAGATCCGCACTGTTATGGGATCTTCAGGCAAAGCCTAA
Upstream 100 bases:
>100_bases GCGCGTGCTGCGTCACGGTTTTTACCGGCGGCAGGGTATGAAAGGTTTTTTGAAGCGTACTTGTTTGCAACAGTTCCCAG AAAAAAACAGGGAGGAAGTC
Downstream 100 bases:
>100_bases ACAACATACGTTTTCGTCAAGGAGCGCAACATGCCCGTCAAACTGGGATTGAACGGCTTTGGCCGTATCGGCCGCTACCT GCTGCGGCTGCTGGCCGATG
Product: fructose-1,6-bisphosphate aldolase, class II
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MPLISPKEMFAAAYAGGYAIGAFNVNNMEIIQGIMGAASEEKSPVILQVSAGARKYAGQPYIMKLVEAALAVDASVPVAV HLDHGPSFEMCRECIDGGFTSVMIDGSHLPYEENIALTKQVVDYARPRGVWVEAELGKLAGIEEHVQSDEHVYTDPDEAV DFVERTGCDSLAIAIGTSHGAYKFKGEPKLDFERLEAICRKLPDYPLVLHGASSVPQEFVDLCNQYGGNVGGARGVPEDM LRRAAGMGVCKINVDTDIRLAVTACIRQYLAEHPEEFDPRSYLKPAREAVRQMVAHKIRTVMGSSGKA
Sequences:
>Translated_308_residues MPLISPKEMFAAAYAGGYAIGAFNVNNMEIIQGIMGAASEEKSPVILQVSAGARKYAGQPYIMKLVEAALAVDASVPVAV HLDHGPSFEMCRECIDGGFTSVMIDGSHLPYEENIALTKQVVDYARPRGVWVEAELGKLAGIEEHVQSDEHVYTDPDEAV DFVERTGCDSLAIAIGTSHGAYKFKGEPKLDFERLEAICRKLPDYPLVLHGASSVPQEFVDLCNQYGGNVGGARGVPEDM LRRAAGMGVCKINVDTDIRLAVTACIRQYLAEHPEEFDPRSYLKPAREAVRQMVAHKIRTVMGSSGKA >Mature_307_residues PLISPKEMFAAAYAGGYAIGAFNVNNMEIIQGIMGAASEEKSPVILQVSAGARKYAGQPYIMKLVEAALAVDASVPVAVH LDHGPSFEMCRECIDGGFTSVMIDGSHLPYEENIALTKQVVDYARPRGVWVEAELGKLAGIEEHVQSDEHVYTDPDEAVD FVERTGCDSLAIAIGTSHGAYKFKGEPKLDFERLEAICRKLPDYPLVLHGASSVPQEFVDLCNQYGGNVGGARGVPEDML RRAAGMGVCKINVDTDIRLAVTACIRQYLAEHPEEFDPRSYLKPAREAVRQMVAHKIRTVMGSSGKA
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=309, Percent_Identity=41.747572815534, Blast_Score=226, Evalue=1e-60, Organism=Escherichia coli, GI87082041, Length=310, Percent_Identity=40.6451612903226, Blast_Score=221, Evalue=4e-59, Organism=Escherichia coli, GI1788072, Length=296, Percent_Identity=37.5, Blast_Score=172, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6322790, Length=353, Percent_Identity=25.4957507082153, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011289 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 33402; Mature: 33270
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00602 ALDOLASE_CLASS_II_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLISPKEMFAAAYAGGYAIGAFNVNNMEIIQGIMGAASEEKSPVILQVSAGARKYAGQP CCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCH YIMKLVEAALAVDASVPVAVHLDHGPSFEMCRECIDGGFTSVMIDGSHLPYEENIALTKQ HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHH VVDYARPRGVWVEAELGKLAGIEEHVQSDEHVYTDPDEAVDFVERTGCDSLAIAIGTSHG HHHHHCCCCEEEEECHHHHCCHHHHHCCCCCEECCHHHHHHHHHHCCCCEEEEEEECCCC AYKFKGEPKLDFERLEAICRKLPDYPLVLHGASSVPQEFVDLCNQYGGNVGGARGVPEDM CEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHH LRRAAGMGVCKINVDTDIRLAVTACIRQYLAEHPEEFDPRSYLKPAREAVRQMVAHKIRT HHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH VMGSSGKA HHCCCCCC >Mature Secondary Structure PLISPKEMFAAAYAGGYAIGAFNVNNMEIIQGIMGAASEEKSPVILQVSAGARKYAGQP CCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCH YIMKLVEAALAVDASVPVAVHLDHGPSFEMCRECIDGGFTSVMIDGSHLPYEENIALTKQ HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHH VVDYARPRGVWVEAELGKLAGIEEHVQSDEHVYTDPDEAVDFVERTGCDSLAIAIGTSHG HHHHHCCCCEEEEECHHHHCCHHHHHCCCCCEECCHHHHHHHHHHCCCCEEEEEEECCCC AYKFKGEPKLDFERLEAICRKLPDYPLVLHGASSVPQEFVDLCNQYGGNVGGARGVPEDM CEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHH LRRAAGMGVCKINVDTDIRLAVTACIRQYLAEHPEEFDPRSYLKPAREAVRQMVAHKIRT HHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH VMGSSGKA HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]