Click here to switch to the map view.

The map label for this gene is yjeA [H]

Identifier: 220903409

GI number: 220903409

Start: 158014

End: 159072

Strand: Direct

Name: yjeA [H]

Synonym: Ddes_0123

Alternate gene names: 220903409

Gene position: 158014-159072 (Clockwise)

Preceding gene: 220903407

Following gene: 220903416

Centisome position: 5.5

GC content: 62.13

Gene sequence:

>1059_bases
ATGAAACCCTTATGGATACGCCTTTGGGCGATATTTTTTTTCGGGCTGGCCGTATGCGCTGCACCGGGCGTTCAGGCCCG
GGTGGTAGACGGCGGCAGCATCATGGATCAGCACATGCGCGAAAACCTGTGTGCGCTGACGTTTGACGATGGGCCTTCTG
CCAATACGCCGCAGTTGCTGGACATGTTGAGCGAATATGGCATTCCGGCCACATTTTTTCTTTTGGGCAAGCAGGCCGAG
CGGCATCCTGACCTCGTGCGGCGTATTCTGGCCGAAGGGCATGAGGTGGGTAACCACTCGTATTCGCATCCCAACCTGCG
CATGCTTTCTCCAGAAAAGAAACTGCAGGAGATAGGGCAGACCGATGCCATCCTGCGCTCTCTCGGGGCCAGCCCTTCTT
TTTTGCGGCCTCCTTACGGGGCTTATGACAATCATACGGTGAGTGTGGCCGAAAGTCTGGGCCTGGGCATCATGCTCTGG
TCGCTGGACAGCCGCGACTGGAAAAGCCTGCCCGCCAACTACGCCACCCTGCGCAGTACCCGAGGCACTGTGTACGATAC
CGGCGCCTTGCGCGGCATTTTTCTGTTTCATGACACGCACAGGCGTACAGTCGAAGACCTGCCCCGTATCATCCGCGACC
TGCGCGCCGGGGGGTGTCAGCGCTTTGTGACCGTGAGCGATTACCTTGACGGGCTGCTTGATCCGGAGCCGGGTATACTT
ATGACCCGACGCCCCACAGACAGCGCCCAGCCCGCCGTGGCAGACAAAAAGCCCGGCCGCCTCAAGGAGCAGTTTCAGGA
AATGCCGCCCGAAAGCTACCCTGCAGGCACGGCGGCCTTGCCCCTGGCCCGCACGAGCCGCCCCTGGCGGTCTGGAAGCG
GCGCGGCCGAGACGGGCAGGCCACCGGCCGCAGAGGTGGACCGGCAGGCTGCCGGCGAAAACAGCGGTCCGGGGCATGAC
AGCAGTGTTCAGCCTACAACAGGAGCACCGGAAGCCGGCCTGCCTTTGGGCAGCTCTGTTTTCACGCCCGGTGCGGCTGC
CGGTTCTGCGGACGCTTAG

Upstream 100 bases:

>100_bases
TAGCACCTCTGTACGGCGTCAGCCGGAGCCGCGCCCGCGGTAACGGTTGTCTTGCGGGGCTGAAAGGGGGGGTGACAGCA
GTTTTTTTAGAGGCAATGTA

Downstream 100 bases:

>100_bases
AGCAATTACCGCTTCAAATGATTGCTTAACGGTCGGCAAAGCTGCCTTACAAGGATTTCAAGTATGCAATGCTCTGCAAC
CGTCAGCGCTTGAAATCGTC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKPLWIRLWAIFFFGLAVCAAPGVQARVVDGGSIMDQHMRENLCALTFDDGPSANTPQLLDMLSEYGIPATFFLLGKQAE
RHPDLVRRILAEGHEVGNHSYSHPNLRMLSPEKKLQEIGQTDAILRSLGASPSFLRPPYGAYDNHTVSVAESLGLGIMLW
SLDSRDWKSLPANYATLRSTRGTVYDTGALRGIFLFHDTHRRTVEDLPRIIRDLRAGGCQRFVTVSDYLDGLLDPEPGIL
MTRRPTDSAQPAVADKKPGRLKEQFQEMPPESYPAGTAALPLARTSRPWRSGSGAAETGRPPAAEVDRQAAGENSGPGHD
SSVQPTTGAPEAGLPLGSSVFTPGAAAGSADA

Sequences:

>Translated_352_residues
MKPLWIRLWAIFFFGLAVCAAPGVQARVVDGGSIMDQHMRENLCALTFDDGPSANTPQLLDMLSEYGIPATFFLLGKQAE
RHPDLVRRILAEGHEVGNHSYSHPNLRMLSPEKKLQEIGQTDAILRSLGASPSFLRPPYGAYDNHTVSVAESLGLGIMLW
SLDSRDWKSLPANYATLRSTRGTVYDTGALRGIFLFHDTHRRTVEDLPRIIRDLRAGGCQRFVTVSDYLDGLLDPEPGIL
MTRRPTDSAQPAVADKKPGRLKEQFQEMPPESYPAGTAALPLARTSRPWRSGSGAAETGRPPAAEVDRQAAGENSGPGHD
SSVQPTTGAPEAGLPLGSSVFTPGAAAGSADA
>Mature_352_residues
MKPLWIRLWAIFFFGLAVCAAPGVQARVVDGGSIMDQHMRENLCALTFDDGPSANTPQLLDMLSEYGIPATFFLLGKQAE
RHPDLVRRILAEGHEVGNHSYSHPNLRMLSPEKKLQEIGQTDAILRSLGASPSFLRPPYGAYDNHTVSVAESLGLGIMLW
SLDSRDWKSLPANYATLRSTRGTVYDTGALRGIFLFHDTHRRTVEDLPRIIRDLRAGGCQRFVTVSDYLDGLLDPEPGIL
MTRRPTDSAQPAVADKKPGRLKEQFQEMPPESYPAGTAALPLARTSRPWRSGSGAAETGRPPAAEVDRQAAGENSGPGHD
SSVQPTTGAPEAGLPLGSSVFTPGAAAGSADA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=164, Percent_Identity=37.1951219512195, Blast_Score=107, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6323339, Length=163, Percent_Identity=36.1963190184049, Blast_Score=102, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 37978; Mature: 37978

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLWIRLWAIFFFGLAVCAAPGVQARVVDGGSIMDQHMRENLCALTFDDGPSANTPQLL
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCHHHH
DMLSEYGIPATFFLLGKQAERHPDLVRRILAEGHEVGNHSYSHPNLRMLSPEKKLQEIGQ
HHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCHHHCCCCCCCCCEEEECHHHHHHHCCH
TDAILRSLGASPSFLRPPYGAYDNHTVSVAESLGLGIMLWSLDSRDWKSLPANYATLRST
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHCCCCHHHHHCC
RGTVYDTGALRGIFLFHDTHRRTVEDLPRIIRDLRAGGCQRFVTVSDYLDGLLDPEPGIL
CCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHCCCCCCCEE
MTRRPTDSAQPAVADKKPGRLKEQFQEMPPESYPAGTAALPLARTSRPWRSGSGAAETGR
EEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
PPAAEVDRQAAGENSGPGHDSSVQPTTGAPEAGLPLGSSVFTPGAAAGSADA
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPLWIRLWAIFFFGLAVCAAPGVQARVVDGGSIMDQHMRENLCALTFDDGPSANTPQLL
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCHHHH
DMLSEYGIPATFFLLGKQAERHPDLVRRILAEGHEVGNHSYSHPNLRMLSPEKKLQEIGQ
HHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCHHHCCCCCCCCCEEEECHHHHHHHCCH
TDAILRSLGASPSFLRPPYGAYDNHTVSVAESLGLGIMLWSLDSRDWKSLPANYATLRST
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHCCCCHHHHHCC
RGTVYDTGALRGIFLFHDTHRRTVEDLPRIIRDLRAGGCQRFVTVSDYLDGLLDPEPGIL
CCCEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHCCCCCCCEE
MTRRPTDSAQPAVADKKPGRLKEQFQEMPPESYPAGTAALPLARTSRPWRSGSGAAETGR
EEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
PPAAEVDRQAAGENSGPGHDSSVQPTTGAPEAGLPLGSSVFTPGAAAGSADA
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]