Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220903407

Identifier: 220903407

GI number: 220903407

Start: 156445

End: 156714

Strand: Direct

Name: 220903407

Synonym: Ddes_0121

Alternate gene names: NA

Gene position: 156445-156714 (Clockwise)

Preceding gene: 220903406

Following gene: 220903409

Centisome position: 5.44

GC content: 52.96

Gene sequence:

>270_bases
ATGGGAAAAAGCTTAGCCTTCGGGAAAGGGCGGCGAGATTCTTTCTCGCAGGGCAGGCTTTTCTCCCTCATTGTGCGCCG
CGCAGACGGCCTGAATAGCGAAAATAAAAAAACTGCCATACCAGCAGGGTCGCAAAATTTTTCCATAACGACCAAGCTGT
TCTCCTTGTCGCCCACCGTGCAGGCGGCCCAATTAACGGACGAAGAAGAAGTCCTCGTGGCCCGCAGGATCCCAAAAAAA
GCTTTAGGATACCGCGATCCTCGAACCTGA

Upstream 100 bases:

>100_bases
GTACGGCAGCGAGCTAGTGCAGCTATACATTCTCAAAAGATAAATGCTAGAGAGGGGCTGCCTGCGCGGCGGGCGGCAGT
GTGCGGCGCGCAGGCATGGG

Downstream 100 bases:

>100_bases
CCACAGGGCAGTAAAACCCCTACAAGGCAATGCAGCGTTCCCGGGCGGGCGTGGGCGGCAGCACCGCAGCGGGCAGGCCA
TGGGACAACCGGTTCCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MGKSLAFGKGRRDSFSQGRLFSLIVRRADGLNSENKKTAIPAGSQNFSITTKLFSLSPTVQAAQLTDEEEVLVARRIPKK
ALGYRDPRT

Sequences:

>Translated_89_residues
MGKSLAFGKGRRDSFSQGRLFSLIVRRADGLNSENKKTAIPAGSQNFSITTKLFSLSPTVQAAQLTDEEEVLVARRIPKK
ALGYRDPRT
>Mature_88_residues
GKSLAFGKGRRDSFSQGRLFSLIVRRADGLNSENKKTAIPAGSQNFSITTKLFSLSPTVQAAQLTDEEEVLVARRIPKKA
LGYRDPRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9797; Mature: 9666

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKSLAFGKGRRDSFSQGRLFSLIVRRADGLNSENKKTAIPAGSQNFSITTKLFSLSPTV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEECCCCC
QAAQLTDEEEVLVARRIPKKALGYRDPRT
EEECCCCCHHHHHHHHCCHHHCCCCCCCC
>Mature Secondary Structure 
GKSLAFGKGRRDSFSQGRLFSLIVRRADGLNSENKKTAIPAGSQNFSITTKLFSLSPTV
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEECCCCC
QAAQLTDEEEVLVARRIPKKALGYRDPRT
EEECCCCCHHHHHHHHCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA