| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903384
Identifier: 220903384
GI number: 220903384
Start: 126225
End: 126971
Strand: Direct
Name: 220903384
Synonym: Ddes_0098
Alternate gene names: NA
Gene position: 126225-126971 (Clockwise)
Preceding gene: 220903383
Following gene: 220903389
Centisome position: 4.39
GC content: 59.71
Gene sequence:
>747_bases TTGAAATACAAGGAAAGCCTTTCCATCATCTTTATGAGGGATAACGGTCCCCGGCGCAGTTTTCGTGTTTGCCGGGGCCG CTTTTACGCGGCGCTGGTCTTTTTCGCCTGCCTGCCTGTGCTGAGTTCTGTTCTGGGCTGGCATTGCTGGCAGCTCTGGC AGGAAAATGCCGCGCTGCGCGCGAATGTGCTGCGCTTTGAAAGCGACTATCAGGGCGCACAGGCCACGGCAGAGCGCCTT GAGCATCTTGAAGAACTGCTGCGCGAAGAAGATGTGCAGGGGCGCGATCTTGTGCTGCGCCGTCTGGGCGGGGGAGAACC CGCCGTGGAAGCCCCCCCGGCAGACAGGGATGAGAACGGCAAAAGCGAGGCGCTGCGCGGTGCGGAGGGGCCGGGGCATG AGGACTTTCCTGCCATTGACCTTGATTACGTCAAAGTGGGCAATGTGCAGGTGCGCGCCCTGCGCGGCGGCAAGCTGCGC CTTGCCCTTGATTTGCGCAATACCGACAACCAGCGGCTGGCTTCCGGATCTGTGTCCGGCACGCTGATCACGGCTGACGG GGCAAAGCACCCTCTGAGTTTTGACCCGGAAAACGTAGGTGACTTTCGCATCAGCCGCTTCAAACGCACGGTCATTGTGG TGCGCCTGCCGGGACGCCTTGATCTGGTGAATGCCCAGGTCATTCTTGAGGTGCGCAATCAGGACGAAAGCGTGGTATAC CGCAATATTTTTCCTGTGGAACACTAG
Upstream 100 bases:
>100_bases AAACCCTGCTCCTGCAGTATGACGGCAAGAAATGGCTTATCACGCGTGAAGACTGGACGGCGGCTCCCGCCGCTGCCCCT GCGCCCGGAGGAGGCAGGCC
Downstream 100 bases:
>100_bases GGCAATCAACGCTTCAAATACTTGCTTAACGGCCGGCAAAGCCGCCCTGCAATCATTTGGCGACAAGGATTTTTCTCCAA ATCCTTATCGAGCACTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKYKESLSIIFMRDNGPRRSFRVCRGRFYAALVFFACLPVLSSVLGWHCWQLWQENAALRANVLRFESDYQGAQATAERL EHLEELLREEDVQGRDLVLRRLGGGEPAVEAPPADRDENGKSEALRGAEGPGHEDFPAIDLDYVKVGNVQVRALRGGKLR LALDLRNTDNQRLASGSVSGTLITADGAKHPLSFDPENVGDFRISRFKRTVIVVRLPGRLDLVNAQVILEVRNQDESVVY RNIFPVEH
Sequences:
>Translated_248_residues MKYKESLSIIFMRDNGPRRSFRVCRGRFYAALVFFACLPVLSSVLGWHCWQLWQENAALRANVLRFESDYQGAQATAERL EHLEELLREEDVQGRDLVLRRLGGGEPAVEAPPADRDENGKSEALRGAEGPGHEDFPAIDLDYVKVGNVQVRALRGGKLR LALDLRNTDNQRLASGSVSGTLITADGAKHPLSFDPENVGDFRISRFKRTVIVVRLPGRLDLVNAQVILEVRNQDESVVY RNIFPVEH >Mature_248_residues MKYKESLSIIFMRDNGPRRSFRVCRGRFYAALVFFACLPVLSSVLGWHCWQLWQENAALRANVLRFESDYQGAQATAERL EHLEELLREEDVQGRDLVLRRLGGGEPAVEAPPADRDENGKSEALRGAEGPGHEDFPAIDLDYVKVGNVQVRALRGGKLR LALDLRNTDNQRLASGSVSGTLITADGAKHPLSFDPENVGDFRISRFKRTVIVVRLPGRLDLVNAQVILEVRNQDESVVY RNIFPVEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27893; Mature: 27893
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKESLSIIFMRDNGPRRSFRVCRGRFYAALVFFACLPVLSSVLGWHCWQLWQENAALR CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ANVLRFESDYQGAQATAERLEHLEELLREEDVQGRDLVLRRLGGGEPAVEAPPADRDENG HHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC KSEALRGAEGPGHEDFPAIDLDYVKVGNVQVRALRGGKLRLALDLRNTDNQRLASGSVSG HHHHHCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCEEEEEEEECCCCCCEEECCCCCE TLITADGAKHPLSFDPENVGDFRISRFKRTVIVVRLPGRLDLVNAQVILEVRNQDESVVY EEEEECCCCCCCCCCCCCCCHHHHHEEEEEEEEEECCCCEEEECEEEEEEECCCCCCEEE RNIFPVEH EEECCCCC >Mature Secondary Structure MKYKESLSIIFMRDNGPRRSFRVCRGRFYAALVFFACLPVLSSVLGWHCWQLWQENAALR CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ANVLRFESDYQGAQATAERLEHLEELLREEDVQGRDLVLRRLGGGEPAVEAPPADRDENG HHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC KSEALRGAEGPGHEDFPAIDLDYVKVGNVQVRALRGGKLRLALDLRNTDNQRLASGSVSG HHHHHCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCEEEEEEEECCCCCCEEECCCCCE TLITADGAKHPLSFDPENVGDFRISRFKRTVIVVRLPGRLDLVNAQVILEVRNQDESVVY EEEEECCCCCCCCCCCCCCCHHHHHEEEEEEEEEECCCCEEEECEEEEEEECCCCCCEEE RNIFPVEH EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA