| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903309
Identifier: 220903309
GI number: 220903309
Start: 32728
End: 33735
Strand: Reverse
Name: 220903309
Synonym: Ddes_0023
Alternate gene names: NA
Gene position: 33735-32728 (Counterclockwise)
Preceding gene: 220903310
Following gene: 220903308
Centisome position: 1.17
GC content: 65.67
Gene sequence:
>1008_bases ATGACGCAATATGCCGCGCCACATGATGTCATGAGCGCCCGGGCGCGCTTTCCGGCCGGGCTGGAACAGCCCGAGGGCAG CCTTCGCTTTGGTGCGGACGCGCTGTTGCTGGCAGCCTTTGTTACGCGGCATCTGGAAGCAAAAAAACACAGATACGCGG CGGGCGGATCCCTTGCGCGGTCTCCCGGACTGACCCCTGTGCCTGTTGCGGAGCTTGGCAGCGGCTGTGGCGCGGCCTTG CTGGCCCTGGCCCTGCGCTGCCCGCAGGTGGCGGGGCTAGGTCTTGAGCGTGAAGAGCCGCTGGTACAGGCGGCGCGGCG CAATGCTCGCCTGTTGGGCTTGTCCGGCCATGTCGGCCTGCCCGATGTATCCGATCTGCCAGATATGACGGCGAGTCTGG ACGGGCTTGACGGGGTGACCGCTCCGTCCGGGCAAGCGCGCTTTGCCATGCTGGACATCGCCGACAGGTCAGCTCTGGCC GCCCTTGCCGTTCCTGCGCTACCGCATACGCAAGCCAGCCCGGCGGGCGCAAGACGACTGGCCGGAAACCAGCACATCGT CATGGCCAACCCCCCGTACGATACCGGGGGCCGCCCTTCGCCCCGGGCCATGCGAGAGCGCGCCCTGCGCGGAAACGGCA ACACCGCTGGCGGAGAAAATGTGCTGGATACATTCTGCCGTGCCGCCGCCATGCTGTTGCGCCATCAGGGATATTTCTTC TGTATTCATGACGCTCGCGCCCTGCCGCAGCTGTGCGCCGCCATGCAGGCGGCCCGCTTTGGGATCAGGCGTATTCTGCC CGTGCATGCCCGCGCGGGCGGCCCTGCCCTGCGAATATTGGTAGAATCACGCAAAAATGCGGCCCACGACACGGTACTTG AAGCACCATTGTGCCTGCACGGCGATTCTCCCGATGCCAAGCCGCTGTGGACAGCCGAAGCGCTGCGCTTTTGCCCCTGG CTGAGCCGGAACGATGCCGGCGACAGTGCTCTTTTCACCGCATCATGA
Upstream 100 bases:
>100_bases CATTGCTGTAAGCAATATGGAATATGCCCGGGCGGCAGCAAAGGCCGCTGCCCGGCGCGCAACACAAGGTACGTCCGCAA CACGGCGGCACACAGTGACG
Downstream 100 bases:
>100_bases CAGAGAACCGCATATGAATTTCATAGCCGACCTGCACATTCATTCCCGTTTTTCCCGTGCCACCAGCAAGGCCCTCAATG CCCGCCATCTGGCCGCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTQYAAPHDVMSARARFPAGLEQPEGSLRFGADALLLAAFVTRHLEAKKHRYAAGGSLARSPGLTPVPVAELGSGCGAAL LALALRCPQVAGLGLEREEPLVQAARRNARLLGLSGHVGLPDVSDLPDMTASLDGLDGVTAPSGQARFAMLDIADRSALA ALAVPALPHTQASPAGARRLAGNQHIVMANPPYDTGGRPSPRAMRERALRGNGNTAGGENVLDTFCRAAAMLLRHQGYFF CIHDARALPQLCAAMQAARFGIRRILPVHARAGGPALRILVESRKNAAHDTVLEAPLCLHGDSPDAKPLWTAEALRFCPW LSRNDAGDSALFTAS
Sequences:
>Translated_335_residues MTQYAAPHDVMSARARFPAGLEQPEGSLRFGADALLLAAFVTRHLEAKKHRYAAGGSLARSPGLTPVPVAELGSGCGAAL LALALRCPQVAGLGLEREEPLVQAARRNARLLGLSGHVGLPDVSDLPDMTASLDGLDGVTAPSGQARFAMLDIADRSALA ALAVPALPHTQASPAGARRLAGNQHIVMANPPYDTGGRPSPRAMRERALRGNGNTAGGENVLDTFCRAAAMLLRHQGYFF CIHDARALPQLCAAMQAARFGIRRILPVHARAGGPALRILVESRKNAAHDTVLEAPLCLHGDSPDAKPLWTAEALRFCPW LSRNDAGDSALFTAS >Mature_334_residues TQYAAPHDVMSARARFPAGLEQPEGSLRFGADALLLAAFVTRHLEAKKHRYAAGGSLARSPGLTPVPVAELGSGCGAALL ALALRCPQVAGLGLEREEPLVQAARRNARLLGLSGHVGLPDVSDLPDMTASLDGLDGVTAPSGQARFAMLDIADRSALAA LAVPALPHTQASPAGARRLAGNQHIVMANPPYDTGGRPSPRAMRERALRGNGNTAGGENVLDTFCRAAAMLLRHQGYFFC IHDARALPQLCAAMQAARFGIRRILPVHARAGGPALRILVESRKNAAHDTVLEAPLCLHGDSPDAKPLWTAEALRFCPWL SRNDAGDSALFTAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35221; Mature: 35090
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQYAAPHDVMSARARFPAGLEQPEGSLRFGADALLLAAFVTRHLEAKKHRYAAGGSLAR CCCCCCCHHHHHHHHHCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SPGLTPVPVAELGSGCGAALLALALRCPQVAGLGLEREEPLVQAARRNARLLGLSGHVGL CCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHCCCEEEEECCCCCC PDVSDLPDMTASLDGLDGVTAPSGQARFAMLDIADRSALAALAVPALPHTQASPAGARRL CCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHH AGNQHIVMANPPYDTGGRPSPRAMRERALRGNGNTAGGENVLDTFCRAAAMLLRHQGYFF CCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE CIHDARALPQLCAAMQAARFGIRRILPVHARAGGPALRILVESRKNAAHDTVLEAPLCLH EEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCHHHHHHHCCCEEEE GDSPDAKPLWTAEALRFCPWLSRNDAGDSALFTAS CCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECC >Mature Secondary Structure TQYAAPHDVMSARARFPAGLEQPEGSLRFGADALLLAAFVTRHLEAKKHRYAAGGSLAR CCCCCCHHHHHHHHHCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SPGLTPVPVAELGSGCGAALLALALRCPQVAGLGLEREEPLVQAARRNARLLGLSGHVGL CCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHCCCEEEEECCCCCC PDVSDLPDMTASLDGLDGVTAPSGQARFAMLDIADRSALAALAVPALPHTQASPAGARRL CCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHH AGNQHIVMANPPYDTGGRPSPRAMRERALRGNGNTAGGENVLDTFCRAAAMLLRHQGYFF CCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE CIHDARALPQLCAAMQAARFGIRRILPVHARAGGPALRILVESRKNAAHDTVLEAPLCLH EEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCHHHHHHHCCCEEEE GDSPDAKPLWTAEALRFCPWLSRNDAGDSALFTAS CCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA