Click here to switch to the map view.

The map label for this gene is 220903306

Identifier: 220903306

GI number: 220903306

Start: 26392

End: 27039

Strand: Reverse

Name: 220903306

Synonym: Ddes_0020

Alternate gene names: NA

Gene position: 27039-26392 (Counterclockwise)

Preceding gene: 220903307

Following gene: 220903303

Centisome position: 0.94

GC content: 56.33

Gene sequence:

>648_bases
ATGGCGCGCAAAACTGCTATTAGTGAAAGTCTGCTGAGCATTGCGGACATATCCCGCCATTTTTCTCTCCCGGAATCCAC
AACCCGCTATTACTGCAAGCGCTTTGCCGCCTTTATTCCCAGTGTGGGCGAAGGCAGAAGACGGCGCTACCGCCCCGAAA
CGCTTGAAGTTATCGCCGCCATACTTGAGCAGATGCAAAAATCCCGCACGGCGGCCGCTGTGGAAGACGCCCTTCTGGCG
CGTTTTCCGCGTAATGCTGTGGCCCTTGCGGGCAATGCCCCGCTTCAGGCTGTTCAGCCGCCCGCCCAGGATTTTTTTCC
CTCAGCAGCATTGCAGTTGATGGAACGGCAAACCACAGCGCTGGAAGGGATTGCGCAATTGCTGCACGCCGTTGTGGAAC
GTCTGCCTGCGCAGACGGGCCAGACTGCTCCCGGAGCTTCCGGACAAAATGCGGATTTGCGACAAGAACTTGATACCCTG
CGCCTTTTACTCCACTCATCTGAAAAAACGCAACAGGCTGACCTTGAACAGTTACGGCAATGGATGGGACGCATAATCCG
CAGCAAAGGCGCTGCGGAAAACCCGGCTGATGCCACAGAACCATCGTTGAAGCAGGGAAAAGCCGCTTCCGGTTCCGGAC
AGTCATAA

Upstream 100 bases:

>100_bases
TGACGTCTCCTGCGGCCCTGCTCTTTTTCAAGCACACTTCCTTATGGGTCCGGGCAACAACGCAACAATATGTAAGTTCA
CGCTTCGCACAGGAGGAAAC

Downstream 100 bases:

>100_bases
CTGACCAGAGGCAAATCCCGCTACAGCCCATATGCCACAGGCCCCGCAACAAGCCCGGCCCATGTGCAATGAACACCGCC
CCCCGCTTAGCCGACTCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Regulatory Protein MerR

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MARKTAISESLLSIADISRHFSLPESTTRYYCKRFAAFIPSVGEGRRRRYRPETLEVIAAILEQMQKSRTAAAVEDALLA
RFPRNAVALAGNAPLQAVQPPAQDFFPSAALQLMERQTTALEGIAQLLHAVVERLPAQTGQTAPGASGQNADLRQELDTL
RLLLHSSEKTQQADLEQLRQWMGRIIRSKGAAENPADATEPSLKQGKAASGSGQS

Sequences:

>Translated_215_residues
MARKTAISESLLSIADISRHFSLPESTTRYYCKRFAAFIPSVGEGRRRRYRPETLEVIAAILEQMQKSRTAAAVEDALLA
RFPRNAVALAGNAPLQAVQPPAQDFFPSAALQLMERQTTALEGIAQLLHAVVERLPAQTGQTAPGASGQNADLRQELDTL
RLLLHSSEKTQQADLEQLRQWMGRIIRSKGAAENPADATEPSLKQGKAASGSGQS
>Mature_214_residues
ARKTAISESLLSIADISRHFSLPESTTRYYCKRFAAFIPSVGEGRRRRYRPETLEVIAAILEQMQKSRTAAAVEDALLAR
FPRNAVALAGNAPLQAVQPPAQDFFPSAALQLMERQTTALEGIAQLLHAVVERLPAQTGQTAPGASGQNADLRQELDTLR
LLLHSSEKTQQADLEQLRQWMGRIIRSKGAAENPADATEPSLKQGKAASGSGQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23375; Mature: 23244

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKTAISESLLSIADISRHFSLPESTTRYYCKRFAAFIPSVGEGRRRRYRPETLEVIAA
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHH
ILEQMQKSRTAAAVEDALLARFPRNAVALAGNAPLQAVQPPAQDFFPSAALQLMERQTTA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHH
LEGIAQLLHAVVERLPAQTGQTAPGASGQNADLRQELDTLRLLLHSSEKTQQADLEQLRQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
WMGRIIRSKGAAENPADATEPSLKQGKAASGSGQS
HHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure 
ARKTAISESLLSIADISRHFSLPESTTRYYCKRFAAFIPSVGEGRRRRYRPETLEVIAA
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHH
ILEQMQKSRTAAAVEDALLARFPRNAVALAGNAPLQAVQPPAQDFFPSAALQLMERQTTA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHH
LEGIAQLLHAVVERLPAQTGQTAPGASGQNADLRQELDTLRLLLHSSEKTQQADLEQLRQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
WMGRIIRSKGAAENPADATEPSLKQGKAASGSGQS
HHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA