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The map label for this gene is dppD [H]

Identifier: 21911257

GI number: 21911257

Start: 1736792

End: 1737595

Strand: Direct

Name: dppD [H]

Synonym: SpyM3_1721

Alternate gene names: 21911257

Gene position: 1736792-1737595 (Clockwise)

Preceding gene: 21911256

Following gene: 21911258

Centisome position: 91.39

GC content: 38.93

Gene sequence:

>804_bases
ATGACAGAAACATTATTAAGCATTAAAGACCTCTCCATCACCTTCACTCAATACGGAAGATTTTTAAAACCATTTCAATC
CACACCGATCCAAGCGCTGAATTTAGAAATTAAAAAAGGTGAGTTATTAGCTATTATAGGTGCTAGTGGTTCAGGCAAGA
GTTTATTAGCACATGCTATTATGGATATTCTTCCTAAAAATGCAGCTGTAACAGGAGATATGATTTATCGTGGTCAATCA
CTAACTGCTAAACGCATCAGACAGTTGCGAGGAAAAGAAATGACGTTGATTCCACAATCCGTTAATTATTTAGATCCATC
TATGAAAGTCAAACATCAGGTGCGCTTAGGTATCTCAGAAAATGCTAAGGCTACTCAAGAAGGATTGTTTCAACAGTTTG
GTTTAAAAGAAAGTGATGGTGACTTGTATCCTTTCCAACTTTCTGGCGGAATGCTCCGACGTGTTTTGTTTACAACGTGT
ATTAGTGATACGGTTTCTTTGATTATTGCGGATGAGCCCACCCCTGGATTACATCCAGATGCTCTGCAAATGGTTTTAGA
TCAACTACGCTCCTTTGCAGATAAAGGAATAAGCGTCATCTTTATCACTCATGATATTGTAGCAGCTAGTCAAATTGCGG
ATCGTATAACTATTTTTAAAGAGGGAAAAGCTATTGAAACAGCCCCAGCTAGCTTTTTTAGCGGAGGTGGGGAACAATTA
CAAACAGAATTTGCGAGACGTTTATGGCGCACACTCCCTCAGCAAGACTTTTTGAAAGGAGTTACTCATGACCTTAGAGG
CTAA

Upstream 100 bases:

>100_bases
GCCTTTATCTTATTTTGGTTGTCAATGCCTTTGATACTATCGGAGAATCTTTAAAGAAACTCTTTTACCCTCAAACGGAT
CATTTTTAGGAGGTAGAGAT

Downstream 100 bases:

>100_bases
AAAGCTTGGCTTTTATCATAAAAAAGATCAATGGCTTTTTAAGGAGATTGATTTAGAGGTAGCACCTGGTCAAATCTTAG
GGATATTTGGACAAAGTGGG

Product: putative dipeptide ABC transporter ATP-binding protein

Products: NA

Alternate protein names: Stage 0 sporulation protein KD [H]

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MTETLLSIKDLSITFTQYGRFLKPFQSTPIQALNLEIKKGELLAIIGASGSGKSLLAHAIMDILPKNAAVTGDMIYRGQS
LTAKRIRQLRGKEMTLIPQSVNYLDPSMKVKHQVRLGISENAKATQEGLFQQFGLKESDGDLYPFQLSGGMLRRVLFTTC
ISDTVSLIIADEPTPGLHPDALQMVLDQLRSFADKGISVIFITHDIVAASQIADRITIFKEGKAIETAPASFFSGGGEQL
QTEFARRLWRTLPQQDFLKGVTHDLRG

Sequences:

>Translated_267_residues
MTETLLSIKDLSITFTQYGRFLKPFQSTPIQALNLEIKKGELLAIIGASGSGKSLLAHAIMDILPKNAAVTGDMIYRGQS
LTAKRIRQLRGKEMTLIPQSVNYLDPSMKVKHQVRLGISENAKATQEGLFQQFGLKESDGDLYPFQLSGGMLRRVLFTTC
ISDTVSLIIADEPTPGLHPDALQMVLDQLRSFADKGISVIFITHDIVAASQIADRITIFKEGKAIETAPASFFSGGGEQL
QTEFARRLWRTLPQQDFLKGVTHDLRG
>Mature_266_residues
TETLLSIKDLSITFTQYGRFLKPFQSTPIQALNLEIKKGELLAIIGASGSGKSLLAHAIMDILPKNAAVTGDMIYRGQSL
TAKRIRQLRGKEMTLIPQSVNYLDPSMKVKHQVRLGISENAKATQEGLFQQFGLKESDGDLYPFQLSGGMLRRVLFTTCI
SDTVSLIIADEPTPGLHPDALQMVLDQLRSFADKGISVIFITHDIVAASQIADRITIFKEGKAIETAPASFFSGGGEQLQ
TEFARRLWRTLPQQDFLKGVTHDLRG

Specific function: Part of the binding protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system. Required for sporulation and competence [H]

COG id: COG0444

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI31657092, Length=208, Percent_Identity=25, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI145693107, Length=288, Percent_Identity=29.8611111111111, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1788506, Length=251, Percent_Identity=29.8804780876494, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1787759, Length=250, Percent_Identity=31.6, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI48994883, Length=239, Percent_Identity=30.5439330543933, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787548, Length=250, Percent_Identity=28.4, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789963, Length=267, Percent_Identity=30.3370786516854, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789890, Length=203, Percent_Identity=30.5418719211823, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788225, Length=232, Percent_Identity=31.8965517241379, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787105, Length=213, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1787029, Length=222, Percent_Identity=29.2792792792793, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787758, Length=288, Percent_Identity=26.7361111111111, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787089, Length=213, Percent_Identity=28.6384976525822, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789672, Length=243, Percent_Identity=25.9259259259259, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787500, Length=244, Percent_Identity=26.6393442622951, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1789962, Length=208, Percent_Identity=25.9615384615385, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI48995001, Length=202, Percent_Identity=26.7326732673267, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789891, Length=257, Percent_Identity=28.4046692607004, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789991, Length=239, Percent_Identity=27.1966527196653, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789032, Length=209, Percent_Identity=28.2296650717703, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI48994997, Length=246, Percent_Identity=27.2357723577236, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1786398, Length=209, Percent_Identity=28.7081339712919, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1786872, Length=196, Percent_Identity=27.5510204081633, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081834, Length=229, Percent_Identity=26.2008733624454, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1787792, Length=207, Percent_Identity=26.0869565217391, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787547, Length=238, Percent_Identity=24.7899159663866, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786319, Length=204, Percent_Identity=25.4901960784314, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786703, Length=209, Percent_Identity=29.6650717703349, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788450, Length=221, Percent_Identity=25.7918552036199, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786563, Length=214, Percent_Identity=27.5700934579439, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786253, Length=198, Percent_Identity=26.7676767676768, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1788897, Length=209, Percent_Identity=25.8373205741627, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1787164, Length=197, Percent_Identity=27.4111675126904, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1788472, Length=208, Percent_Identity=21.1538461538462, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010066
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 29437; Mature: 29305

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETLLSIKDLSITFTQYGRFLKPFQSTPIQALNLEIKKGELLAIIGASGSGKSLLAHAI
CCCCCEEHHHCEEEHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHH
MDILPKNAAVTGDMIYRGQSLTAKRIRQLRGKEMTLIPQSVNYLDPSMKVKHQVRLGISE
HHHHCCCCCEECHHEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHEEECCCC
NAKATQEGLFQQFGLKESDGDLYPFQLSGGMLRRVLFTTCISDTVSLIIADEPTPGLHPD
CCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCCCCHH
ALQMVLDQLRSFADKGISVIFITHDIVAASQIADRITIFKEGKAIETAPASFFSGGGEQL
HHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCCHHHH
QTEFARRLWRTLPQQDFLKGVTHDLRG
HHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TETLLSIKDLSITFTQYGRFLKPFQSTPIQALNLEIKKGELLAIIGASGSGKSLLAHAI
CCCCEEHHHCEEEHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHH
MDILPKNAAVTGDMIYRGQSLTAKRIRQLRGKEMTLIPQSVNYLDPSMKVKHQVRLGISE
HHHHCCCCCEECHHEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHEEECCCC
NAKATQEGLFQQFGLKESDGDLYPFQLSGGMLRRVLFTTCISDTVSLIIADEPTPGLHPD
CCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCCCCHH
ALQMVLDQLRSFADKGISVIFITHDIVAASQIADRITIFKEGKAIETAPASFFSGGGEQL
HHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCCCCCHHHHCCCHHHH
QTEFARRLWRTLPQQDFLKGVTHDLRG
HHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]