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The map label for this gene is hsdS

Identifier: 21911179

GI number: 21911179

Start: 1651573

End: 1652748

Strand: Direct

Name: hsdS

Synonym: SpyM3_1643

Alternate gene names: NA

Gene position: 1651573-1652748 (Clockwise)

Preceding gene: 21911178

Following gene: 21911180

Centisome position: 86.9

GC content: 34.78

Gene sequence:

>1176_bases
ATGACAAAATCTAAACAGCCTCAATATCGCTTTGACGGTTTTGAAGGGGAGTGGGAAGAAAAAGAACTAGGGGATATTGT
TCAAATTACAATGGGCCAATCTCCATCAAGTCAAAATTATACTACAAACCCTTCTGATTATATTCTAGTACAAGGAAATG
CCGATATAAAAAATGGATATGTTTTTCCGCGTGTCTGGACAACACAAATTACAAAACAAGCTGACAAAGGTGATATTATT
CTTAGTGTTAGGGCTCCAGTTGGTGATGTTGGAAAGACAAATTATCATGTTATTATTGGGCGTGGAGTTGCTGCTATAAA
AGGTAATGAATTTATCTTTCAAATATTAAAATACTTGAAAGAAATTGGTTATTGGAAAAGAATTAGTACAGGTTCAACTT
TTGATAGCATTAGCTCTAGTAATATCAAATATGCTAAAATTCAAATTCCCTCCCTCCCCGAACAAGAAGCTATTGGCGAA
CTTTTCCAAACGGTTGATCAATTGATTCAGTTGCAGGATCAAAAGCTAGCAACTCTAAAAGAACAAAAGCAAACCTTCCT
CAGAAAGATGTTCCCAGCTCAAGGACAAAAAGTCCCTGAAATCCGTTTACAAGGTTTTGATGGTGAGTGGGAAGAGAAGA
AATTGGGAGAGATATCTCGGATGTTTTCAGGTGGTACTCCTAGCGTAGGTATTTCTGAATACTATAACGGTAATATTCCT
TTCATTAGATCTTCTGAGATTAATAGTGATCAAACAGAGTTATTTATCACAAACAAAGGTCTATCAAATTCATCAGCAAA
AATAGTGGAAAAAAATACATTATTATACGCTCTCTACGGTGCAACTAGTGGAGAAGTTGGACTTTCAAGAATAAGTGGAG
CTATTAATCAAGCAATTTTAGCCATTATTCCTGAGAAAAAATATTCTTCTCTTTTTATAAAAAATTGGTTATATAAACAA
AAATCTTCAATTATTGAGAAATATTTACAGGGTGGTCAAGGAAATTTATCTGGTTCCATTGTGAAAGGATTAGAGCTTTA
TCTACCCTCCCTCCCCGAACAAGAAGCCATCGGTGACTTCTTCCAAACCCTAGACCAACAAATGAGTCAAATCGAAGATA
AATTAACAGAACTTAAAGCACTCAAACAAACATTACTCAATCGTTTATTCGTATAA

Upstream 100 bases:

>100_bases
CATGAATAAACTCAAATACAAGAGCCAATTTGAACGGGAGTTAGTTCAATTCATTAGAGAGCAAATCCAACCCTTAAAAG
GGCACTAGGAAAGGAAAGAG

Downstream 100 bases:

>100_bases
GAAAGGACTCACATGGCAGAGAAAACAACTTCACTCCGGCAAGCACTATGGCATTCGGCCGACCAATTACGTGGCCAAAT
GGATGCCAATGACTATAAAA

Product: putative type I site-specific deoxyribonuclease hsdS subunit

Products: NA

Alternate protein names: S.MjaXIP; Type I restriction enzyme MjaXIP specificity protein; S protein [H]

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTKSKQPQYRFDGFEGEWEEKELGDIVQITMGQSPSSQNYTTNPSDYILVQGNADIKNGYVFPRVWTTQITKQADKGDII
LSVRAPVGDVGKTNYHVIIGRGVAAIKGNEFIFQILKYLKEIGYWKRISTGSTFDSISSSNIKYAKIQIPSLPEQEAIGE
LFQTVDQLIQLQDQKLATLKEQKQTFLRKMFPAQGQKVPEIRLQGFDGEWEEKKLGEISRMFSGGTPSVGISEYYNGNIP
FIRSSEINSDQTELFITNKGLSNSSAKIVEKNTLLYALYGATSGEVGLSRISGAINQAILAIIPEKKYSSLFIKNWLYKQ
KSSIIEKYLQGGQGNLSGSIVKGLELYLPSLPEQEAIGDFFQTLDQQMSQIEDKLTELKALKQTLLNRLFV

Sequences:

>Translated_391_residues
MTKSKQPQYRFDGFEGEWEEKELGDIVQITMGQSPSSQNYTTNPSDYILVQGNADIKNGYVFPRVWTTQITKQADKGDII
LSVRAPVGDVGKTNYHVIIGRGVAAIKGNEFIFQILKYLKEIGYWKRISTGSTFDSISSSNIKYAKIQIPSLPEQEAIGE
LFQTVDQLIQLQDQKLATLKEQKQTFLRKMFPAQGQKVPEIRLQGFDGEWEEKKLGEISRMFSGGTPSVGISEYYNGNIP
FIRSSEINSDQTELFITNKGLSNSSAKIVEKNTLLYALYGATSGEVGLSRISGAINQAILAIIPEKKYSSLFIKNWLYKQ
KSSIIEKYLQGGQGNLSGSIVKGLELYLPSLPEQEAIGDFFQTLDQQMSQIEDKLTELKALKQTLLNRLFV
>Mature_390_residues
TKSKQPQYRFDGFEGEWEEKELGDIVQITMGQSPSSQNYTTNPSDYILVQGNADIKNGYVFPRVWTTQITKQADKGDIIL
SVRAPVGDVGKTNYHVIIGRGVAAIKGNEFIFQILKYLKEIGYWKRISTGSTFDSISSSNIKYAKIQIPSLPEQEAIGEL
FQTVDQLIQLQDQKLATLKEQKQTFLRKMFPAQGQKVPEIRLQGFDGEWEEKKLGEISRMFSGGTPSVGISEYYNGNIPF
IRSSEINSDQTELFITNKGLSNSSAKIVEKNTLLYALYGATSGEVGLSRISGAINQAILAIIPEKKYSSLFIKNWLYKQK
SSIIEKYLQGGQGNLSGSIVKGLELYLPSLPEQEAIGDFFQTLDQQMSQIEDKLTELKALKQTLLNRLFV

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 43850; Mature: 43718

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSKQPQYRFDGFEGEWEEKELGDIVQITMGQSPSSQNYTTNPSDYILVQGNADIKNGY
CCCCCCCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCE
VFPRVWTTQITKQADKGDIILSVRAPVGDVGKTNYHVIIGRGVAAIKGNEFIFQILKYLK
ECCEEHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHHHHHH
EIGYWKRISTGSTFDSISSSNIKYAKIQIPSLPEQEAIGELFQTVDQLIQLQDQKLATLK
HCCCCEECCCCCCHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EQKQTFLRKMFPAQGQKVPEIRLQGFDGEWEEKKLGEISRMFSGGTPSVGISEYYNGNIP
HHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC
FIRSSEINSDQTELFITNKGLSNSSAKIVEKNTLLYALYGATSGEVGLSRISGAINQAIL
EEECCCCCCCCEEEEEEECCCCCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHE
AIIPEKKYSSLFIKNWLYKQKSSIIEKYLQGGQGNLSGSIVKGLELYLPSLPEQEAIGDF
EEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
FQTLDQQMSQIEDKLTELKALKQTLLNRLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKSKQPQYRFDGFEGEWEEKELGDIVQITMGQSPSSQNYTTNPSDYILVQGNADIKNGY
CCCCCCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCE
VFPRVWTTQITKQADKGDIILSVRAPVGDVGKTNYHVIIGRGVAAIKGNEFIFQILKYLK
ECCEEHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHHHHHHHHHH
EIGYWKRISTGSTFDSISSSNIKYAKIQIPSLPEQEAIGELFQTVDQLIQLQDQKLATLK
HCCCCEECCCCCCHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EQKQTFLRKMFPAQGQKVPEIRLQGFDGEWEEKKLGEISRMFSGGTPSVGISEYYNGNIP
HHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC
FIRSSEINSDQTELFITNKGLSNSSAKIVEKNTLLYALYGATSGEVGLSRISGAINQAIL
EEECCCCCCCCEEEEEEECCCCCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHE
AIIPEKKYSSLFIKNWLYKQKSSIIEKYLQGGQGNLSGSIVKGLELYLPSLPEQEAIGDF
EEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
FQTLDQQMSQIEDKLTELKALKQTLLNRLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]