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The map label for this gene is yfmR [H]

Identifier: 21910124

GI number: 21910124

Start: 646501

End: 648378

Strand: Direct

Name: yfmR [H]

Synonym: SpyM3_0588

Alternate gene names: 21910124

Gene position: 646501-648378 (Clockwise)

Preceding gene: 21910123

Following gene: 21910125

Centisome position: 34.02

GC content: 39.4

Gene sequence:

>1878_bases
ATGAGCCATTTTTTGGTGGAGAAATTGACAAAAACGGTGGGAGATAAAACAGTCTTTCAGGATATTTCCTTTATTATTCA
TGACTTTGACCGTATTGGGATTATTGGGGTTAATGGAACAGGAAAAACAACTCTTTTAGATGTCTTGTCGGGAAGGCTTG
GTTTTGACGGAGACCATTCACCATTTTCTAAAGCCAATGATTACAAAATCGCTTACTTAACACAAGATCCTGAATTTAAC
GATGCATCCTCTGTTTTAGATACGGTATTGTCATCTGATGTTAAGGCGATTCAGCTGATTCGTCAGTATGAACTATTGAT
GGCGAATTATACTGAAGATAAACAAGAGACCTTAGAGTCCCTCATGTCTGAAATGGATCGCTTAGATGCTTGGTCTATTG
AAAGTGATGTCAAAACAGTCCTATCAAAATTAGGCATCACGGATTTGGAACAAAAAGTGGGAGACCTATCAGGTGGTATG
AGAAGACGTGTCCAGTTAGCTCAAGTATTGCTAGGAGCTGCTGACTTACTCTTGTTGGATGAGCCGACCAACCATCTCGA
TATTGACACCATCGCTTGGTTAACAACCTATCTCAAGACAGCTAAAAAAACCGTCCTTTTTATTACCCATGACCGTTATT
TCCTTGATCATGTGGCTACCCGTATTTTTGAATTGGATAAAGCGGGACTGACAGAATATCAAGGCAATTACCAAGACTAT
GTGCGCTTAAAAGCAGAACAAGACGAACGAGATGCTGCTAATTTACACAAGAAGAAGCAACTCTATAAACAAGAATTAGC
CTGGATGAGGACGCAGCCACAGGCGCGTGCAACCAAACAGCAGGCTAGAATCAATCGTTTCACTGACTTGAAAAAAGAAG
TTCACCAAGACAGTTCTGCGGATAAGTTGGAGATGGCTTTCGAAACGAGCCGAATTGGGAAGAAGGTGATTCACTTTGAA
GACCTTTCTTTTGCTTATGGCGACCGACAGTTGATTAAGGATTTTAATTTGATTATTCAAAATAAAGATCGTATTGGAAT
TGTTGGAGATAACGGCGTCGGAAAATCTACCCTGTTAAATATCATCAACGGTGATCTCAAACCAACTTCTGGGAAGCTTG
ATATTGGAGATACTATTCGTGTAGGTTATTTCTCTCAGCAGCTCAAAGATATGGATGAGACCAAACGGGTCATTAATTAC
CTTCAAGAAGTGGCTGATGAGGTTAAAACAAGCGTGGGAACAACGAGTATCAGTGAGCTTTTAGAACAATTTCTTTTTCC
GAGATCAAGTCATGGCACGCTGATTGCTAAATTATCTGGTGGGGAGAAAAAACGGCTCTACTTGCTAAAACTGCTCATTG
AAAAGCCAAATGTTCTTCTCCTTGATGAGCCAACAAATGATTTAGACATTGCCACCTTGACGGTCTTAGAAAACTTTTTA
GCTAACTTTGCAGGACCAGTCATTACGGTTAGTCACGATCGTTATTTCCTAGACAAAGTAGCCACTAAGATTTTAGCCTT
TGAAGAAGGCGATATTCGTGTTTTTTATGGGAATTACAGTGATTACCTTGATGAAAAAGCTTTTGAAAAAGAAACAGTTG
AGGCTGACTTAGCTAAAGCAATAGTCACTGAAGAAGTGCCACTTCCTCCGAAAGAGGAGAAAAAGCGCATGTCCTACCTT
GAAAAACAAGAATGGGCTCAGATAGAAGATAAAATAGCAACTATTGAGGCTAATATTGAAGAAATTGAAAACCAAATGTT
AACTGTAGTTAGTGATTATGGCCAGTTAGCTCAATTACAAAAGGAACTCGATCAGCGCAATAATGATTTATTATTGGCGT
ATGAACGGTTTGAGTATTTGAGTGGACTAGACATATAA

Upstream 100 bases:

>100_bases
TAGGGCTTATGCTTGAGAAAGTTGAATTAGCGATTGTAGAGGGACGCCTAGATAATGATTTCACTACAATTGAAGCATTT
GTTAGAGAGGAATTAGCAAC

Downstream 100 bases:

>100_bases
GTATACTATGGTAATGTTATGTTTATAATAAACAAGTGATAATAGAAAAGAAGTGCTCTTGCACTGAGCCCCAAAAGTTG
GCTACTCTATTTGAAGTAAA

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 625; Mature: 624

Protein sequence:

>625_residues
MSHFLVEKLTKTVGDKTVFQDISFIIHDFDRIGIIGVNGTGKTTLLDVLSGRLGFDGDHSPFSKANDYKIAYLTQDPEFN
DASSVLDTVLSSDVKAIQLIRQYELLMANYTEDKQETLESLMSEMDRLDAWSIESDVKTVLSKLGITDLEQKVGDLSGGM
RRRVQLAQVLLGAADLLLLDEPTNHLDIDTIAWLTTYLKTAKKTVLFITHDRYFLDHVATRIFELDKAGLTEYQGNYQDY
VRLKAEQDERDAANLHKKKQLYKQELAWMRTQPQARATKQQARINRFTDLKKEVHQDSSADKLEMAFETSRIGKKVIHFE
DLSFAYGDRQLIKDFNLIIQNKDRIGIVGDNGVGKSTLLNIINGDLKPTSGKLDIGDTIRVGYFSQQLKDMDETKRVINY
LQEVADEVKTSVGTTSISELLEQFLFPRSSHGTLIAKLSGGEKKRLYLLKLLIEKPNVLLLDEPTNDLDIATLTVLENFL
ANFAGPVITVSHDRYFLDKVATKILAFEEGDIRVFYGNYSDYLDEKAFEKETVEADLAKAIVTEEVPLPPKEEKKRMSYL
EKQEWAQIEDKIATIEANIEEIENQMLTVVSDYGQLAQLQKELDQRNNDLLLAYERFEYLSGLDI

Sequences:

>Translated_625_residues
MSHFLVEKLTKTVGDKTVFQDISFIIHDFDRIGIIGVNGTGKTTLLDVLSGRLGFDGDHSPFSKANDYKIAYLTQDPEFN
DASSVLDTVLSSDVKAIQLIRQYELLMANYTEDKQETLESLMSEMDRLDAWSIESDVKTVLSKLGITDLEQKVGDLSGGM
RRRVQLAQVLLGAADLLLLDEPTNHLDIDTIAWLTTYLKTAKKTVLFITHDRYFLDHVATRIFELDKAGLTEYQGNYQDY
VRLKAEQDERDAANLHKKKQLYKQELAWMRTQPQARATKQQARINRFTDLKKEVHQDSSADKLEMAFETSRIGKKVIHFE
DLSFAYGDRQLIKDFNLIIQNKDRIGIVGDNGVGKSTLLNIINGDLKPTSGKLDIGDTIRVGYFSQQLKDMDETKRVINY
LQEVADEVKTSVGTTSISELLEQFLFPRSSHGTLIAKLSGGEKKRLYLLKLLIEKPNVLLLDEPTNDLDIATLTVLENFL
ANFAGPVITVSHDRYFLDKVATKILAFEEGDIRVFYGNYSDYLDEKAFEKETVEADLAKAIVTEEVPLPPKEEKKRMSYL
EKQEWAQIEDKIATIEANIEEIENQMLTVVSDYGQLAQLQKELDQRNNDLLLAYERFEYLSGLDI
>Mature_624_residues
SHFLVEKLTKTVGDKTVFQDISFIIHDFDRIGIIGVNGTGKTTLLDVLSGRLGFDGDHSPFSKANDYKIAYLTQDPEFND
ASSVLDTVLSSDVKAIQLIRQYELLMANYTEDKQETLESLMSEMDRLDAWSIESDVKTVLSKLGITDLEQKVGDLSGGMR
RRVQLAQVLLGAADLLLLDEPTNHLDIDTIAWLTTYLKTAKKTVLFITHDRYFLDHVATRIFELDKAGLTEYQGNYQDYV
RLKAEQDERDAANLHKKKQLYKQELAWMRTQPQARATKQQARINRFTDLKKEVHQDSSADKLEMAFETSRIGKKVIHFED
LSFAYGDRQLIKDFNLIIQNKDRIGIVGDNGVGKSTLLNIINGDLKPTSGKLDIGDTIRVGYFSQQLKDMDETKRVINYL
QEVADEVKTSVGTTSISELLEQFLFPRSSHGTLIAKLSGGEKKRLYLLKLLIEKPNVLLLDEPTNDLDIATLTVLENFLA
NFAGPVITVSHDRYFLDKVATKILAFEEGDIRVFYGNYSDYLDEKAFEKETVEADLAKAIVTEEVPLPPKEEKKRMSYLE
KQEWAQIEDKIATIEANIEEIENQMLTVVSDYGQLAQLQKELDQRNNDLLLAYERFEYLSGLDI

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=554, Percent_Identity=29.9638989169675, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI10947135, Length=555, Percent_Identity=29.5495495495495, Blast_Score=202, Evalue=6e-52,
Organism=Homo sapiens, GI69354671, Length=555, Percent_Identity=29.5495495495495, Blast_Score=202, Evalue=8e-52,
Organism=Homo sapiens, GI27881506, Length=547, Percent_Identity=30.164533820841, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI10947137, Length=547, Percent_Identity=30.164533820841, Blast_Score=200, Evalue=4e-51,
Organism=Homo sapiens, GI4505771, Length=269, Percent_Identity=28.2527881040892, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI9961252, Length=269, Percent_Identity=28.2527881040892, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI9961250, Length=269, Percent_Identity=28.2527881040892, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI157502201, Length=268, Percent_Identity=25.7462686567164, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI157502203, Length=268, Percent_Identity=25.7462686567164, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI2367384, Length=550, Percent_Identity=35.6363636363636, Blast_Score=334, Evalue=1e-92,
Organism=Escherichia coli, GI1787182, Length=630, Percent_Identity=32.5396825396825, Blast_Score=306, Evalue=2e-84,
Organism=Escherichia coli, GI1789751, Length=598, Percent_Identity=30.4347826086957, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1787041, Length=534, Percent_Identity=33.1460674157303, Blast_Score=259, Evalue=3e-70,
Organism=Escherichia coli, GI48994943, Length=486, Percent_Identity=22.2222222222222, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1788165, Length=200, Percent_Identity=26.5, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI48994883, Length=235, Percent_Identity=27.2340425531915, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI145693107, Length=410, Percent_Identity=22.9268292682927, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788506, Length=261, Percent_Identity=25.2873563218391, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1787164, Length=193, Percent_Identity=27.979274611399, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786698, Length=167, Percent_Identity=31.1377245508982, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787758, Length=207, Percent_Identity=27.536231884058, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786253, Length=233, Percent_Identity=24.8927038626609, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI1787029, Length=229, Percent_Identity=27.5109170305677, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI87082268, Length=182, Percent_Identity=27.4725274725275, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788053, Length=197, Percent_Identity=26.3959390862944, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=566, Percent_Identity=30.3886925795053, Blast_Score=244, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI17555318, Length=548, Percent_Identity=28.2846715328467, Blast_Score=194, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17553372, Length=538, Percent_Identity=30.8550185873606, Blast_Score=191, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17558664, Length=333, Percent_Identity=24.024024024024, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=261, Percent_Identity=26.0536398467433, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=261, Percent_Identity=26.0536398467433, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=261, Percent_Identity=26.0536398467433, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17567269, Length=241, Percent_Identity=26.9709543568465, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=213, Percent_Identity=27.2300469483568, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=533, Percent_Identity=32.2701688555347, Blast_Score=226, Evalue=6e-60,
Organism=Saccharomyces cerevisiae, GI6320874, Length=520, Percent_Identity=32.6923076923077, Blast_Score=221, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6323278, Length=362, Percent_Identity=27.6243093922652, Blast_Score=134, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6324314, Length=365, Percent_Identity=25.4794520547945, Blast_Score=124, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6325030, Length=378, Percent_Identity=26.4550264550265, Blast_Score=117, Evalue=6e-27,
Organism=Drosophila melanogaster, GI24666836, Length=549, Percent_Identity=30.9653916211293, Blast_Score=220, Evalue=3e-57,
Organism=Drosophila melanogaster, GI24641342, Length=550, Percent_Identity=29.2727272727273, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24642252, Length=523, Percent_Identity=31.3575525812619, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI18859989, Length=523, Percent_Identity=31.3575525812619, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24581191, Length=166, Percent_Identity=33.1325301204819, Blast_Score=67, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24581189, Length=166, Percent_Identity=33.1325301204819, Blast_Score=67, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24581193, Length=166, Percent_Identity=33.1325301204819, Blast_Score=67, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24581195, Length=166, Percent_Identity=33.1325301204819, Blast_Score=67, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 71090; Mature: 70958

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHFLVEKLTKTVGDKTVFQDISFIIHDFDRIGIIGVNGTGKTTLLDVLSGRLGFDGDHS
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCCCCCC
PFSKANDYKIAYLTQDPEFNDASSVLDTVLSSDVKAIQLIRQYELLMANYTEDKQETLES
CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
LMSEMDRLDAWSIESDVKTVLSKLGITDLEQKVGDLSGGMRRRVQLAQVLLGAADLLLLD
HHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCEEEEE
EPTNHLDIDTIAWLTTYLKTAKKTVLFITHDRYFLDHVATRIFELDKAGLTEYQGNYQDY
CCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHCCCHHHH
VRLKAEQDERDAANLHKKKQLYKQELAWMRTQPQARATKQQARINRFTDLKKEVHQDSSA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKLEMAFETSRIGKKVIHFEDLSFAYGDRQLIKDFNLIIQNKDRIGIVGDNGVGKSTLLN
CHHHHHHHHHHHHHHHEEEECCCHHCCCHHHHHHHHHHEECCCCEEEECCCCCCHHHHHH
IINGDLKPTSGKLDIGDTIRVGYFSQQLKDMDETKRVINYLQEVADEVKTSVGTTSISEL
HHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LEQFLFPRSSHGTLIAKLSGGEKKRLYLLKLLIEKPNVLLLDEPTNDLDIATLTVLENFL
HHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH
ANFAGPVITVSHDRYFLDKVATKILAFEEGDIRVFYGNYSDYLDEKAFEKETVEADLAKA
HHHCCCEEEEECCHHHHHHHHHHHHEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
IVTEEVPLPPKEEKKRMSYLEKQEWAQIEDKIATIEANIEEIENQMLTVVSDYGQLAQLQ
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELDQRNNDLLLAYERFEYLSGLDI
HHHHCCCCCEEEEEHHHHHHCCCCC
>Mature Secondary Structure 
SHFLVEKLTKTVGDKTVFQDISFIIHDFDRIGIIGVNGTGKTTLLDVLSGRLGFDGDHS
CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCCCCCC
PFSKANDYKIAYLTQDPEFNDASSVLDTVLSSDVKAIQLIRQYELLMANYTEDKQETLES
CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
LMSEMDRLDAWSIESDVKTVLSKLGITDLEQKVGDLSGGMRRRVQLAQVLLGAADLLLLD
HHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCEEEEE
EPTNHLDIDTIAWLTTYLKTAKKTVLFITHDRYFLDHVATRIFELDKAGLTEYQGNYQDY
CCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHCCCHHHH
VRLKAEQDERDAANLHKKKQLYKQELAWMRTQPQARATKQQARINRFTDLKKEVHQDSSA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKLEMAFETSRIGKKVIHFEDLSFAYGDRQLIKDFNLIIQNKDRIGIVGDNGVGKSTLLN
CHHHHHHHHHHHHHHHEEEECCCHHCCCHHHHHHHHHHEECCCCEEEECCCCCCHHHHHH
IINGDLKPTSGKLDIGDTIRVGYFSQQLKDMDETKRVINYLQEVADEVKTSVGTTSISEL
HHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LEQFLFPRSSHGTLIAKLSGGEKKRLYLLKLLIEKPNVLLLDEPTNDLDIATLTVLENFL
HHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH
ANFAGPVITVSHDRYFLDKVATKILAFEEGDIRVFYGNYSDYLDEKAFEKETVEADLAKA
HHHCCCEEEEECCHHHHHHHHHHHHEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
IVTEEVPLPPKEEKKRMSYLEKQEWAQIEDKIATIEANIEEIENQMLTVVSDYGQLAQLQ
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELDQRNNDLLLAYERFEYLSGLDI
HHHHCCCCCEEEEEHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]