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The map label for this gene is yafE [H]

Identifier: 218930245

GI number: 218930245

Start: 3582249

End: 3582770

Strand: Reverse

Name: yafE [H]

Synonym: YPO3218

Alternate gene names: 218930245

Gene position: 3582770-3582249 (Counterclockwise)

Preceding gene: 218930246

Following gene: 218930243

Centisome position: 76.99

GC content: 43.3

Gene sequence:

>522_bases
ATGCAGGCCGCAGCAGATAAAAAACTCACTAATATTGAGATACAACAAGGGCTGGCTGAATCATTGCCTTTTGCTGATCA
AAGCTTTGATATTGTTATCAGCCGTTATTCTGCACACCATTGGCACGATGTTGGGAAAGCTTTACGTGAAGTTAAGCGGG
TATTACGGCCCGGTGGAAAAGTCATCTTCATGGATGTGGTTTCTCCTGGACATCCGGTATTGGATATCTATTTGCAAACA
GTAGAAGTCTTACGCGATACCTCTCATGTACGAAATTACTCTCCTGGAGAATGGCTATCTTTATTTACCGAGGGTGGGTT
AGTAATAAATGAAGTGACTTCTGACCGCTTGTATTTGGAGTTCAGCAGTTGGGTTGCCAGAATGCGGACACCTGCACATT
TTGCTACGGCTATTCGCGAGTTTCAAAAGTTAGCATCTGACGGTGTCATTAATCACTATGCTATTCAGGCTGATGGTTCC
TTTACCAGTGATATCATGATGATTGTGGCAGTAAGAGACTAG

Upstream 100 bases:

>100_bases
ACGGTCATTGCTTCACATTCTCTGGTCACTGGATAGCACGGTAAAAAATCAAAACCATGTCGTATCCTATGATCTCTCCG
CTCAAATATTACAGGTTGTC

Downstream 100 bases:

>100_bases
TAAACAATAAGTGTGGGTAGTGGTAATAATATATCAATATTCACATTTAGATTTATATAAATATATTTTTATTATGGATA
ATGAGGTTATATCCTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVGKALREVKRVLRPGGKVIFMDVVSPGHPVLDIYLQT
VEVLRDTSHVRNYSPGEWLSLFTEGGLVINEVTSDRLYLEFSSWVARMRTPAHFATAIREFQKLASDGVINHYAIQADGS
FTSDIMMIVAVRD

Sequences:

>Translated_173_residues
MQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVGKALREVKRVLRPGGKVIFMDVVSPGHPVLDIYLQT
VEVLRDTSHVRNYSPGEWLSLFTEGGLVINEVTSDRLYLEFSSWVARMRTPAHFATAIREFQKLASDGVINHYAIQADGS
FTSDIMMIVAVRD
>Mature_173_residues
MQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVGKALREVKRVLRPGGKVIFMDVVSPGHPVLDIYLQT
VEVLRDTSHVRNYSPGEWLSLFTEGGLVINEVTSDRLYLEFSSWVARMRTPAHFATAIREFQKLASDGVINHYAIQADGS
FTSDIMMIVAVRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=169, Percent_Identity=65.0887573964497, Blast_Score=236, Evalue=5e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 19444; Mature: 19444

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVGKALREVKRVLRPGGK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEEHHCCHHHHHHHHHHHHHHHHHCCCCC
VIFMDVVSPGHPVLDIYLQTVEVLRDTSHVRNYSPGEWLSLFTEGGLVINEVTSDRLYLE
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCEEEEE
FSSWVARMRTPAHFATAIREFQKLASDGVINHYAIQADGSFTSDIMMIVAVRD
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MQAAADKKLTNIEIQQGLAESLPFADQSFDIVISRYSAHHWHDVGKALREVKRVLRPGGK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEEHHCCHHHHHHHHHHHHHHHHHCCCCC
VIFMDVVSPGHPVLDIYLQTVEVLRDTSHVRNYSPGEWLSLFTEGGLVINEVTSDRLYLE
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCEEEEE
FSSWVARMRTPAHFATAIREFQKLASDGVINHYAIQADGSFTSDIMMIVAVRD
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]