| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930243
Identifier: 218930243
GI number: 218930243
Start: 3580962
End: 3581519
Strand: Reverse
Name: 218930243
Synonym: YPO3216
Alternate gene names: NA
Gene position: 3581519-3580962 (Counterclockwise)
Preceding gene: 218930245
Following gene: 218930242
Centisome position: 76.96
GC content: 41.76
Gene sequence:
>558_bases ATGCTAAACATTGTCCGGCGTAATTTTAAAAGTCAGTTTTCCTATTTGCAGCGTTTTATTGCCTCACCTCGTACCGTTGG TTCATTGGTCCCCTCGTCGCCTTGGTTATGTCAGGCGATGCTAAACCAGATAGATTGGACACAAAATCTTAATATTGCTG AATTAGGTGCGGCTGATGGTGTGCTGACTAAGCGTATTCTGTCGCATATGTCAGCTAATTCGAGCTTACAAGCGTATGAG ATTCAACCTCATTTTGTACATGCATTGCACCAGCTAAAAGATTCGCGTTTACAGATTGCAGATCGTTCTGCGGAGCAGTT GGATCAAGAGTACGATGTTGTTTTTTGTTGTTTACCTTTGCTGTCTATCCCAACCAAGATCAGTATCAGAATATTACAGC AAACTCAGCAACGCCTACGTGCACGCAATGGAGTCTTAGTGCTGTTTCAATACAGCCATCTATCAGAGTCATTGTTATCT CGTTATTTTAATTGGAAAAAAATACGGGTCGTGCGTAATTTTCCTCCTGCGCTGGTTTATATTTGTCACCCCAATTAA
Upstream 100 bases:
>100_bases GTTTATCTGATAAAAATAATTAATTATTAGAACAATCTTAATGAGAACTTAAGAAATATAAAGTGTTATTGTGGTCCATC TGAGTCTCCGAGGAGAGGTT
Downstream 100 bases:
>100_bases CCGACATATCTTGCCCACTCGATGTGGATAAGAGCTTCATATCGAGCTAGGTCACTACGCTGATTTTATTGGGTGTATTA TTAATTTTACGTCACTGTAA
Product: putative methyltransferase
Products: NA
Alternate protein names: Phospholipid N-Methyltransferase; Methyltransferase Type; Ribosomal RNA Adenine Dimethylase; Ribosomal RNA Adenine Methylase Transferase-Like Protein; Conserved Protein; Trans-Aconitate 2-Methyltransferase
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MLNIVRRNFKSQFSYLQRFIASPRTVGSLVPSSPWLCQAMLNQIDWTQNLNIAELGAADGVLTKRILSHMSANSSLQAYE IQPHFVHALHQLKDSRLQIADRSAEQLDQEYDVVFCCLPLLSIPTKISIRILQQTQQRLRARNGVLVLFQYSHLSESLLS RYFNWKKIRVVRNFPPALVYICHPN
Sequences:
>Translated_185_residues MLNIVRRNFKSQFSYLQRFIASPRTVGSLVPSSPWLCQAMLNQIDWTQNLNIAELGAADGVLTKRILSHMSANSSLQAYE IQPHFVHALHQLKDSRLQIADRSAEQLDQEYDVVFCCLPLLSIPTKISIRILQQTQQRLRARNGVLVLFQYSHLSESLLS RYFNWKKIRVVRNFPPALVYICHPN >Mature_185_residues MLNIVRRNFKSQFSYLQRFIASPRTVGSLVPSSPWLCQAMLNQIDWTQNLNIAELGAADGVLTKRILSHMSANSSLQAYE IQPHFVHALHQLKDSRLQIADRSAEQLDQEYDVVFCCLPLLSIPTKISIRILQQTQQRLRARNGVLVLFQYSHLSESLLS RYFNWKKIRVVRNFPPALVYICHPN
Specific function: Unknown
COG id: COG3963
COG function: function code I; Phospholipid N-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21363; Mature: 21363
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNIVRRNFKSQFSYLQRFIASPRTVGSLVPSSPWLCQAMLNQIDWTQNLNIAELGAADG CCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCH VLTKRILSHMSANSSLQAYEIQPHFVHALHQLKDSRLQIADRSAEQLDQEYDVVFCCLPL HHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LSIPTKISIRILQQTQQRLRARNGVLVLFQYSHLSESLLSRYFNWKKIRVVRNFPPALVY HHCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCCHHEEEEEECCCCEEEE ICHPN EECCC >Mature Secondary Structure MLNIVRRNFKSQFSYLQRFIASPRTVGSLVPSSPWLCQAMLNQIDWTQNLNIAELGAADG CCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCH VLTKRILSHMSANSSLQAYEIQPHFVHALHQLKDSRLQIADRSAEQLDQEYDVVFCCLPL HHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LSIPTKISIRILQQTQQRLRARNGVLVLFQYSHLSESLLSRYFNWKKIRVVRNFPPALVY HHCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCCHHEEEEEECCCCEEEE ICHPN EECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA