| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930087
Identifier: 218930087
GI number: 218930087
Start: 3395772
End: 3396050
Strand: Reverse
Name: 218930087
Synonym: YPO3042
Alternate gene names: NA
Gene position: 3396050-3395772 (Counterclockwise)
Preceding gene: 218930091
Following gene: 218930085
Centisome position: 72.97
GC content: 48.39
Gene sequence:
>279_bases ATGGAACTCAACCCAGTATTCGCCCGCCGTCTCTATCTTTGTTGGCTAATCAGCAGTGCTGAAGCGCTCAATGTACCACG TTTGATGACGCTAACCGGCTGGCCACGGCGAACGTTACAAGATGTCTTAAAGGCACTGCCCGGTCTGGGGGTTACGCTGA CTTTTGTGCAGCATGGTGTGCGTAATAATGCGGGTTACTACCAGTTGGAGAGTTGGGGGCCACTGAATAAAAGATGGATA CAAGAAAACCATGATTTTATTTTAGCGGCCATTAAATAG
Upstream 100 bases:
>100_bases GATCACTGACCTGAGCCAGCTCGTCAAAATGCGTTCGCTTGCCACTTGGCCGCAACATCATGTATGAAGGCGATAGTCGC TACTTAACCAGGAGCTTGTT
Downstream 100 bases:
>100_bases TGACAACGGATGTCAGTATTTTTTATTTTCCAAATACATAATCGTCGCGGCAACCCGTGAGCGCACATTTAATTTACGCA ATAAATTACGGATATGTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MELNPVFARRLYLCWLISSAEALNVPRLMTLTGWPRRTLQDVLKALPGLGVTLTFVQHGVRNNAGYYQLESWGPLNKRWI QENHDFILAAIK
Sequences:
>Translated_92_residues MELNPVFARRLYLCWLISSAEALNVPRLMTLTGWPRRTLQDVLKALPGLGVTLTFVQHGVRNNAGYYQLESWGPLNKRWI QENHDFILAAIK >Mature_92_residues MELNPVFARRLYLCWLISSAEALNVPRLMTLTGWPRRTLQDVLKALPGLGVTLTFVQHGVRNNAGYYQLESWGPLNKRWI QENHDFILAAIK
Specific function: Unknown
COG id: COG4519
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10593; Mature: 10593
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNPVFARRLYLCWLISSAEALNVPRLMTLTGWPRRTLQDVLKALPGLGVTLTFVQHGV CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEHHHHHHHC RNNAGYYQLESWGPLNKRWIQENHDFILAAIK CCCCCEEEECCCCCCCHHHHCCCCCEEEEEEC >Mature Secondary Structure MELNPVFARRLYLCWLISSAEALNVPRLMTLTGWPRRTLQDVLKALPGLGVTLTFVQHGV CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEHHHHHHHC RNNAGYYQLESWGPLNKRWIQENHDFILAAIK CCCCCEEEECCCCCCCHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA