Click here to switch to the map view.

The map label for this gene is 218929334

Identifier: 218929334

GI number: 218929334

Start: 2514533

End: 2515534

Strand: Direct

Name: 218929334

Synonym: YPO2238

Alternate gene names: NA

Gene position: 2514533-2515534 (Clockwise)

Preceding gene: 218929333

Following gene: 218929339

Centisome position: 54.03

GC content: 49.1

Gene sequence:

>1002_bases
GTGATGAACATTATGATAACGGGGGCTGCCGGTTTTCTGGGGCGTCGATTGATTGACGGCTTACTGCAACAGGATTATCT
GACTGATCAGCAGGGGGAGCCGCGCAATATCAATAAAATCATTGCCTATGATGTGCTTCCCTTGATGGAAGTAGAGGATC
CACGGGTTCAGGTTGTTTGTGGTGACATTGCCGATCAGAACGGACTATCGGCGGTCTGGGATCGCCAAATTGACACTATT
TTCCATTTGGCAGCGGTTGTTTCCAGCCAGGCCGAAGACGATTTTGATTTAGGTATGCGCATTAACGTTGATGCCACTCG
CAGCCTATTAGAATTGGCTCGTCAGTCCGGCCAATGCCCTAAAGTGATTATTACCAGTTCTGTGGCGGTATTCGGCGGTG
CATTGCCGAAAGTTGTTCCTGATAATCAGGTGTGGTCACCACAGAGTTCCTATGGTACGCAAAAAGCATTAAACGATTTA
TTGCTGTCTGATTACAGCCGCCGTGGGTTTATTGATGGGCGCAGCCTGCGTATGCCAACCATCGTGGTGAGACCCGGTAA
ACCGAACCGCGCTGCCTCCAGTTTTGCCAGTGGCATTATCCGGGAACCTCTGCAAGGGCATGATGCTATTTGCCCCGTCA
GTATGCAAACGCCGTTATGGTTACTCTCACCCAAAATGGCGATCGATAATTTGATTCATGGCCATGAACTGGATGCTAGC
CAACTCCGCTTAGGGCGGGTGATCAACTTGCCGGGGCTATCCGTTAGTGTACAGCAGATGATTGATGCTTTGCGCCGTCT
CGCGGGTGATGAGGTCGTTGAACGTATCCAAGTGCAGCGGGACCCTTCGATCGAGAGAATTGTTAATTCCTGGCCAGGTG
ATTTTGAAGCCAGCTATGGGAAAGTATTAGGTTTTCGTCGCGATCCGGATTTTGACAGTATTATTCAGGATTTTATCATT
GAGAATTTGCCTGAATTAGCGGCAGAGAAGCACTTTATTTAG

Upstream 100 bases:

>100_bases
TCTACCACGCTATTTATTGGTGCCGCGCTGGTGTTTTTGATCCCGGCCAAGGCAGTTAATCATTAACGACTAACGACGAA
CCAATAGACAGGAGGAGTCA

Downstream 100 bases:

>100_bases
CCGAATGGATTCAAATTTGGGGTCAGCATAATCGTCGCCCCCAAATTTGAGCCAGGTAGAATTTAATCCGGATAGAATTT
AAACCAGATAGAATTTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MMNIMITGAAGFLGRRLIDGLLQQDYLTDQQGEPRNINKIIAYDVLPLMEVEDPRVQVVCGDIADQNGLSAVWDRQIDTI
FHLAAVVSSQAEDDFDLGMRINVDATRSLLELARQSGQCPKVIITSSVAVFGGALPKVVPDNQVWSPQSSYGTQKALNDL
LLSDYSRRGFIDGRSLRMPTIVVRPGKPNRAASSFASGIIREPLQGHDAICPVSMQTPLWLLSPKMAIDNLIHGHELDAS
QLRLGRVINLPGLSVSVQQMIDALRRLAGDEVVERIQVQRDPSIERIVNSWPGDFEASYGKVLGFRRDPDFDSIIQDFII
ENLPELAAEKHFI

Sequences:

>Translated_333_residues
MMNIMITGAAGFLGRRLIDGLLQQDYLTDQQGEPRNINKIIAYDVLPLMEVEDPRVQVVCGDIADQNGLSAVWDRQIDTI
FHLAAVVSSQAEDDFDLGMRINVDATRSLLELARQSGQCPKVIITSSVAVFGGALPKVVPDNQVWSPQSSYGTQKALNDL
LLSDYSRRGFIDGRSLRMPTIVVRPGKPNRAASSFASGIIREPLQGHDAICPVSMQTPLWLLSPKMAIDNLIHGHELDAS
QLRLGRVINLPGLSVSVQQMIDALRRLAGDEVVERIQVQRDPSIERIVNSWPGDFEASYGKVLGFRRDPDFDSIIQDFII
ENLPELAAEKHFI
>Mature_333_residues
MMNIMITGAAGFLGRRLIDGLLQQDYLTDQQGEPRNINKIIAYDVLPLMEVEDPRVQVVCGDIADQNGLSAVWDRQIDTI
FHLAAVVSSQAEDDFDLGMRINVDATRSLLELARQSGQCPKVIITSSVAVFGGALPKVVPDNQVWSPQSSYGTQKALNDL
LLSDYSRRGFIDGRSLRMPTIVVRPGKPNRAASSFASGIIREPLQGHDAICPVSMQTPLWLLSPKMAIDNLIHGHELDAS
QLRLGRVINLPGLSVSVQQMIDALRRLAGDEVVERIQVQRDPSIERIVNSWPGDFEASYGKVLGFRRDPDFDSIIQDFII
ENLPELAAEKHFI

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI32566934, Length=324, Percent_Identity=25.9259259259259, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24667531, Length=299, Percent_Identity=25.0836120401338, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 36851; Mature: 36851

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNIMITGAAGFLGRRLIDGLLQQDYLTDQQGEPRNINKIIAYDVLPLMEVEDPRVQVVC
CCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEECCCCCEEEEE
GDIADQNGLSAVWDRQIDTIFHLAAVVSSQAEDDFDLGMRINVDATRSLLELARQSGQCP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCCC
KVIITSSVAVFGGALPKVVPDNQVWSPQSSYGTQKALNDLLLSDYSRRGFIDGRSLRMPT
EEEEECHHHHHCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE
IVVRPGKPNRAASSFASGIIREPLQGHDAICPVSMQTPLWLLSPKMAIDNLIHGHELDAS
EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCHH
QLRLGRVINLPGLSVSVQQMIDALRRLAGDEVVERIQVQRDPSIERIVNSWPGDFEASYG
HHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHH
KVLGFRRDPDFDSIIQDFIIENLPELAAEKHFI
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMNIMITGAAGFLGRRLIDGLLQQDYLTDQQGEPRNINKIIAYDVLPLMEVEDPRVQVVC
CCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEECCCCCEEEEE
GDIADQNGLSAVWDRQIDTIFHLAAVVSSQAEDDFDLGMRINVDATRSLLELARQSGQCP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCCC
KVIITSSVAVFGGALPKVVPDNQVWSPQSSYGTQKALNDLLLSDYSRRGFIDGRSLRMPT
EEEEECHHHHHCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE
IVVRPGKPNRAASSFASGIIREPLQGHDAICPVSMQTPLWLLSPKMAIDNLIHGHELDAS
EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCHH
QLRLGRVINLPGLSVSVQQMIDALRRLAGDEVVERIQVQRDPSIERIVNSWPGDFEASYG
HHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHH
KVLGFRRDPDFDSIIQDFIIENLPELAAEKHFI
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]