| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is hemK [H]
Identifier: 218929129
GI number: 218929129
Start: 2290317
End: 2291147
Strand: Direct
Name: hemK [H]
Synonym: YPO2018
Alternate gene names: 218929129
Gene position: 2290317-2291147 (Clockwise)
Preceding gene: 218929128
Following gene: 218929130
Centisome position: 49.21
GC content: 53.55
Gene sequence:
>831_bases ATGAATTATCAGCATTGGCTGTCGTTGGCGGCAGCCCGTTTTACCCACAGTGACAGCCCTAAGCGTGATGCTGAAATCCT ACTGAGTTTTGTGACAGGTAAGGCCCGGACCTATCTGTTGGCTTTTGGTGAAACGGAAATAACGGCAGAACAACTACTGT GGCTCGAAACACTGGCGAACCGTCGGGAGCAAGGTGAACCCATTGCTTATCTGGTTGGGGAGCGCGAGTTCTGGTCTTTA CCGCTGAGTGTTTCCTCTGCAACGCTTATCCCACGGCCTGACACCGAATGTCTGGTGGAGCAGGCGCTGGCACGTTTACC CGCAATGCCTTGTCGTATTTTGGACCTGGGGACGGGTACCGGTGCAATCGCGTTGGCACTGGCCACTGAACGGCGTGATT GCGCGGTCATCGCCGTAGATATCAACGCTGATGCTGTCGCTTTGGCCCGCCATAATGCAGAAAAACTCACGATAGATAAT GTGTGTTTTTTGCAAGGCAGTTGGTTTGAGCCAGTGAGCGGGCGTTTTGCGCTTATCGCCAGTAATCCCCCTTATATTGA TGCCAATGACCCTCATCTTAATGAAGGCGATGTGCGCTATGAACCGCATAGTGCATTGGTTGCGGCGGCTGAGGGGATGG CCGATCTGGCCGCGATTGTCAGCCAGGCACCGGGCTACTTGGATCCCGGCGGTTGGCTCATGCTAGAGCATGGCTGGCAG CAGGCCAATGCAGTGCAAGAACTGCTTAAAAACTCGGGATTTAGTGCGGTAATGACCTGTAAAGATTATGGCAATAATGA CCGGGTGACATTGGGGCAATGGGCCGTGTAA
Upstream 100 bases:
>100_bases GGCTTGATGAAGTGATGGAAGGTAAACTGGATATGCTCATCCAGCCCATTGTGCAGGAATATCAAGCTGACCAACTGTCT GCATTGTCAGAGCAAGACTA
Downstream 100 bases:
>100_bases CCACGCGCAGCTAATAGCGCTGCAACATCAAGTAAAAAGAGATAAAACAAGGAATCGATAGTCATGTGGGTTGATTACAT CGCCATGAAATATTTGCATT
Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Products: NA
Alternate protein names: M.EcoKHemKP; Protein-(glutamine-N(5)) MTase hemK; Protein-glutamine N-methyltransferase hemK [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MNYQHWLSLAAARFTHSDSPKRDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWSL PLSVSSATLIPRPDTECLVEQALARLPAMPCRILDLGTGTGAIALALATERRDCAVIAVDINADAVALARHNAEKLTIDN VCFLQGSWFEPVSGRFALIASNPPYIDANDPHLNEGDVRYEPHSALVAAAEGMADLAAIVSQAPGYLDPGGWLMLEHGWQ QANAVQELLKNSGFSAVMTCKDYGNNDRVTLGQWAV
Sequences:
>Translated_276_residues MNYQHWLSLAAARFTHSDSPKRDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWSL PLSVSSATLIPRPDTECLVEQALARLPAMPCRILDLGTGTGAIALALATERRDCAVIAVDINADAVALARHNAEKLTIDN VCFLQGSWFEPVSGRFALIASNPPYIDANDPHLNEGDVRYEPHSALVAAAEGMADLAAIVSQAPGYLDPGGWLMLEHGWQ QANAVQELLKNSGFSAVMTCKDYGNNDRVTLGQWAV >Mature_276_residues MNYQHWLSLAAARFTHSDSPKRDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWSL PLSVSSATLIPRPDTECLVEQALARLPAMPCRILDLGTGTGAIALALATERRDCAVIAVDINADAVALARHNAEKLTIDN VCFLQGSWFEPVSGRFALIASNPPYIDANDPHLNEGDVRYEPHSALVAAAEGMADLAAIVSQAPGYLDPGGWLMLEHGWQ QANAVQELLKNSGFSAVMTCKDYGNNDRVTLGQWAV
Specific function: Methylates the translation termination release factor RF1/PrfA on 'Gln-235' and RF2/PrfB on 'Gln-252' [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=236, Percent_Identity=32.6271186440678, Blast_Score=93, Evalue=2e-19, Organism=Escherichia coli, GI1787463, Length=275, Percent_Identity=62.5454545454545, Blast_Score=356, Evalue=1e-99, Organism=Escherichia coli, GI87082085, Length=203, Percent_Identity=31.5270935960591, Blast_Score=90, Evalue=2e-19, Organism=Drosophila melanogaster, GI24582226, Length=219, Percent_Identity=26.027397260274, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 30121; Mature: 30121
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYQHWLSLAAARFTHSDSPKRDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLAN CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHH RREQGEPIAYLVGEREFWSLPLSVSSATLIPRPDTECLVEQALARLPAMPCRILDLGTGT HHHCCCCEEEEECCCEEEECCEECCCEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCC GAIALALATERRDCAVIAVDINADAVALARHNAEKLTIDNVCFLQGSWFEPVSGRFALIA CEEEEEEEECCCCEEEEEEECCCCEEEEECCCCCEEEECCEEEEECCCCCCCCCCEEEEE SNPPYIDANDPHLNEGDVRYEPHSALVAAAEGMADLAAIVSQAPGYLDPGGWLMLEHGWQ CCCCEECCCCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEECCCC QANAVQELLKNSGFSAVMTCKDYGNNDRVTLGQWAV HHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCC >Mature Secondary Structure MNYQHWLSLAAARFTHSDSPKRDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLAN CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHH RREQGEPIAYLVGEREFWSLPLSVSSATLIPRPDTECLVEQALARLPAMPCRILDLGTGT HHHCCCCEEEEECCCEEEECCEECCCEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCC GAIALALATERRDCAVIAVDINADAVALARHNAEKLTIDNVCFLQGSWFEPVSGRFALIA CEEEEEEEECCCCEEEEEEECCCCEEEEECCCCCEEEECCEEEEECCCCCCCCCCEEEEE SNPPYIDANDPHLNEGDVRYEPHSALVAAAEGMADLAAIVSQAPGYLDPGGWLMLEHGWQ CCCCEECCCCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEECCCC QANAVQELLKNSGFSAVMTCKDYGNNDRVTLGQWAV HHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7883187; 7543480; 11805295; 8905232; 9278503 [H]