Click here to switch to the map view.

The map label for this gene is 218929038

Identifier: 218929038

GI number: 218929038

Start: 2177144

End: 2177674

Strand: Reverse

Name: 218929038

Synonym: YPO1922

Alternate gene names: NA

Gene position: 2177674-2177144 (Counterclockwise)

Preceding gene: 218929039

Following gene: 218929037

Centisome position: 46.79

GC content: 48.59

Gene sequence:

>531_bases
ATGAAAAAAACTTTAGTGACGTTGATGCTATTTATCCTGCCGGGTATAGCTTTTGCGGAAACCTCGAACAATACCATAAA
GTTCCAGGGAGAAGTCGCAGAACAGACCTGTATGGTGGATATCAATGGTACCGCCAACACCCCGGTGGTTCTGCTGCCGA
CTGTCTCGACCAGTAACCTTAATCAAGTCAACTCGGTGGCGGGAAAGACCAACTTTACGATCAATCTAACAGGCTGCAAT
ATTGCGATTCAAGATACCCAAATCAGCTCTGTTTTTCAGGGGATGAATGTCACGTCTGGCGGAAACCTGGGCAATATTGG
CACAGCAAGAAATGTTGCCATTCAATTAATTGATCCCCGTGGCACCCCGATTCGTATGTCTGGTGGCAGTGTGGAAGTTC
CGGGAATTACCTTGGCGACTGGCGCAACCTCAGCATCACAGGATCTGTCGGCACAATATATAACGGAAGAAGGCCAGGCA
ACCGCAGGCAGTGTTATTGCCTCTGCACAGTATGCGATCACCTACCCCTAA

Upstream 100 bases:

>100_bases
CAATATACAGATAATGGCCCATGTTATTCCTCTCAATGAATATTCATTTTGCTGAATAGCGTTGTTATCAAAATACACAT
CCATATTAAGCGGGAATAAC

Downstream 100 bases:

>100_bases
CCGTTCATGGCAACTGAGCATTTTCATGAATATGTCGGCCAACCGGTAACGGGGCCTTAATGGACCAGAGAAAACAAGGA
TAAGTAAGTAACATGATCTT

Product: fimbrial protein

Products: NA

Alternate protein names: Fimbrial Protein Domain-Containing Protein; Fimbrial Subunit MrkA; F17 Fimbrial Subunit; Fimbrial; Minor Fimbrial Subunit HifD; Type I Fimbrial Protein A Chain; F17a-A; Fimbriae; Fimbrial Subunit Protein; Fimbrial Protein-Like Protein

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKKTLVTLMLFILPGIAFAETSNNTIKFQGEVAEQTCMVDINGTANTPVVLLPTVSTSNLNQVNSVAGKTNFTINLTGCN
IAIQDTQISSVFQGMNVTSGGNLGNIGTARNVAIQLIDPRGTPIRMSGGSVEVPGITLATGATSASQDLSAQYITEEGQA
TAGSVIASAQYAITYP

Sequences:

>Translated_176_residues
MKKTLVTLMLFILPGIAFAETSNNTIKFQGEVAEQTCMVDINGTANTPVVLLPTVSTSNLNQVNSVAGKTNFTINLTGCN
IAIQDTQISSVFQGMNVTSGGNLGNIGTARNVAIQLIDPRGTPIRMSGGSVEVPGITLATGATSASQDLSAQYITEEGQA
TAGSVIASAQYAITYP
>Mature_176_residues
MKKTLVTLMLFILPGIAFAETSNNTIKFQGEVAEQTCMVDINGTANTPVVLLPTVSTSNLNQVNSVAGKTNFTINLTGCN
IAIQDTQISSVFQGMNVTSGGNLGNIGTARNVAIQLIDPRGTPIRMSGGSVEVPGITLATGATSASQDLSAQYITEEGQA
TAGSVIASAQYAITYP

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18187; Mature: 18187

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLVTLMLFILPGIAFAETSNNTIKFQGEVAEQTCMVDINGTANTPVVLLPTVSTSNL
CCHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCEEEEEEECCCCCCCEEEEEECCCCCC
NQVNSVAGKTNFTINLTGCNIAIQDTQISSVFQGMNVTSGGNLGNIGTARNVAIQLIDPR
CHHHHHCCCCEEEEEEECCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCC
GTPIRMSGGSVEVPGITLATGATSASQDLSAQYITEEGQATAGSVIASAQYAITYP
CCEEEECCCEEECCCEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEECEEEEECC
>Mature Secondary Structure
MKKTLVTLMLFILPGIAFAETSNNTIKFQGEVAEQTCMVDINGTANTPVVLLPTVSTSNL
CCHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCEEEEEEECCCCCCCEEEEEECCCCCC
NQVNSVAGKTNFTINLTGCNIAIQDTQISSVFQGMNVTSGGNLGNIGTARNVAIQLIDPR
CHHHHHCCCCEEEEEEECCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCC
GTPIRMSGGSVEVPGITLATGATSASQDLSAQYITEEGQATAGSVIASAQYAITYP
CCEEEECCCEEECCCEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEECEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA