Click here to switch to the map view.

The map label for this gene is 218928838

Identifier: 218928838

GI number: 218928838

Start: 1952528

End: 1953691

Strand: Direct

Name: 218928838

Synonym: YPO1710

Alternate gene names: NA

Gene position: 1952528-1953691 (Clockwise)

Preceding gene: 218928837

Following gene: 218928839

Centisome position: 41.96

GC content: 46.13

Gene sequence:

>1164_bases
ATGAGTGCTTATTTCTATAGGGTGAAAACAGTGATTCGGCATATCAACATGTACCTGCGCGTTTATGCTCATGTCCGTTC
TGTTGCTACGCTACTGATATTGGTCGTTGTGGCTGGGGGGCCAAGCAGTAAAGTGTGGGCTGAAGGCCTCGGGATAAATT
GTGACTATACTGGCAGTATTTATATCAATCCCCCTACCAGTATTATTCGTGTTAAGCCTAATGCGGCCATAGGTGATCCT
ATTGGTTCATGGATGACCATCAGTGCACCTGAAGTTTGGTCATGCGCGCTATTACCCGCTTACCAGTCCCGGGATGTGCG
GGCTGGGATTTTGGTATTTTCACCTTATAATCCATTGCTTACGACCAATATTGATGGTGGTAATTACAAAGTTTTCCGCA
CTGGCGATACTAATCCTGGCTTGGGAATTGCCGTACGTTTTCGTGCTATCGGGGCCGGTTTTAGCAGCGATTGGACCCAA
CTAGAGGGTTTTGGGCTCGTAGACGGCACGGTGAGTGCCCCATTAATAGGACCGATTCCTTATAATGATGGGATTAAATT
TCCCTTAGGAATGGAAATGCAAATTCACTATGTGAAGGCGAGTGAGGAGCTAAGATCGGGTGGCGTAAGGATATTTGATT
TTGCTTATCTTTACCATCGGCGCTCCATTGATGGTGTGCCGGATAATAGTGGTGCTCGTTACAGGATTGTTCAGGTCCCG
GCAAATAGCATTGATATTCAGATAATGACGCAAACCTGTACCACGCCTGATGTGGTCGTGAATCTACCTGAGGTCAATTC
GCGGCAGTTTACCGGCATTGGTACGGTGAAAGCACTTAAAGCTTTTAATCTGAATTTTAATCATTGCCCAGGTGGACTAG
ACGGTATTAATTATAAATTTGGTGCGACGACGAGTATTCTGGATTCGGCTAATGGTGTTGTTGCGTTGGATGCCAACTCG
ACTGCTGAGGGGGTGGGGGTATTACTGCGCAGCCAATCAGATGCGGCGATTGAATTGGATAAGGAATACACGATGAGTGG
TTATGACACCAGTAGCACACAAAGTTACACGGTCCCCATGCAGGCGGGAATTTACCAAATAGAAAACACCGTGACACCTG
GTTCAGTAAAAGGTGAGTTCACATTTACGTTGATCTATAAATGA

Upstream 100 bases:

>100_bases
TCGGTGAGAGTTGCAGTTTTGACTATAAATTGCCGGAAGGTAACCTAGTAAAAGGTCATCTGGTCAAAGGTGACTACCGG
CGCTTAGAGGTGATATGCAA

Downstream 100 bases:

>100_bases
AAACGTTATGGCTAATCCTCAGGCCGCGTGCCCGTAAGGTGAATAATCTGCGTACTTTACTGATTACGGCTATTTTAAGC
AGTTTGGTGTTGAGTGCTAC

Product: putative fimbrial protein

Products: NA

Alternate protein names: Fimbrial Componenet; Type-1 Fimbrial Protein A Subunit

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSAYFYRVKTVIRHINMYLRVYAHVRSVATLLILVVVAGGPSSKVWAEGLGINCDYTGSIYINPPTSIIRVKPNAAIGDP
IGSWMTISAPEVWSCALLPAYQSRDVRAGILVFSPYNPLLTTNIDGGNYKVFRTGDTNPGLGIAVRFRAIGAGFSSDWTQ
LEGFGLVDGTVSAPLIGPIPYNDGIKFPLGMEMQIHYVKASEELRSGGVRIFDFAYLYHRRSIDGVPDNSGARYRIVQVP
ANSIDIQIMTQTCTTPDVVVNLPEVNSRQFTGIGTVKALKAFNLNFNHCPGGLDGINYKFGATTSILDSANGVVALDANS
TAEGVGVLLRSQSDAAIELDKEYTMSGYDTSSTQSYTVPMQAGIYQIENTVTPGSVKGEFTFTLIYK

Sequences:

>Translated_387_residues
MSAYFYRVKTVIRHINMYLRVYAHVRSVATLLILVVVAGGPSSKVWAEGLGINCDYTGSIYINPPTSIIRVKPNAAIGDP
IGSWMTISAPEVWSCALLPAYQSRDVRAGILVFSPYNPLLTTNIDGGNYKVFRTGDTNPGLGIAVRFRAIGAGFSSDWTQ
LEGFGLVDGTVSAPLIGPIPYNDGIKFPLGMEMQIHYVKASEELRSGGVRIFDFAYLYHRRSIDGVPDNSGARYRIVQVP
ANSIDIQIMTQTCTTPDVVVNLPEVNSRQFTGIGTVKALKAFNLNFNHCPGGLDGINYKFGATTSILDSANGVVALDANS
TAEGVGVLLRSQSDAAIELDKEYTMSGYDTSSTQSYTVPMQAGIYQIENTVTPGSVKGEFTFTLIYK
>Mature_386_residues
SAYFYRVKTVIRHINMYLRVYAHVRSVATLLILVVVAGGPSSKVWAEGLGINCDYTGSIYINPPTSIIRVKPNAAIGDPI
GSWMTISAPEVWSCALLPAYQSRDVRAGILVFSPYNPLLTTNIDGGNYKVFRTGDTNPGLGIAVRFRAIGAGFSSDWTQL
EGFGLVDGTVSAPLIGPIPYNDGIKFPLGMEMQIHYVKASEELRSGGVRIFDFAYLYHRRSIDGVPDNSGARYRIVQVPA
NSIDIQIMTQTCTTPDVVVNLPEVNSRQFTGIGTVKALKAFNLNFNHCPGGLDGINYKFGATTSILDSANGVVALDANST
AEGVGVLLRSQSDAAIELDKEYTMSGYDTSSTQSYTVPMQAGIYQIENTVTPGSVKGEFTFTLIYK

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41918; Mature: 41787

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYFYRVKTVIRHINMYLRVYAHVRSVATLLILVVVAGGPSSKVWAEGLGINCDYTGSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHCCCCCCCEECEEE
YINPPTSIIRVKPNAAIGDPIGSWMTISAPEVWSCALLPAYQSRDVRAGILVFSPYNPLL
EECCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCEE
TTNIDGGNYKVFRTGDTNPGLGIAVRFRAIGAGFSSDWTQLEGFGLVDGTVSAPLIGPIP
EEEECCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEECCCEEECCCCCCCEEECCC
YNDGIKFPLGMEMQIHYVKASEELRSGGVRIFDFAYLYHRRSIDGVPDNSGARYRIVQVP
CCCCCCCCCCCEEEEEEEECCHHHHHCCEEEEEEEEEHHHCCCCCCCCCCCCEEEEEEEC
ANSIDIQIMTQTCTTPDVVVNLPEVNSRQFTGIGTVKALKAFNLNFNHCPGGLDGINYKF
CCCEEEEEEEECCCCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCEEC
GATTSILDSANGVVALDANSTAEGVGVLLRSQSDAAIELDKEYTMSGYDTSSTQSYTVPM
CCCHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCEEEECCCEEECCCCCCCCCEEEEEH
QAGIYQIENTVTPGSVKGEFTFTLIYK
HCCEEEEECCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
SAYFYRVKTVIRHINMYLRVYAHVRSVATLLILVVVAGGPSSKVWAEGLGINCDYTGSI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHCCCCCCCEECEEE
YINPPTSIIRVKPNAAIGDPIGSWMTISAPEVWSCALLPAYQSRDVRAGILVFSPYNPLL
EECCCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCEE
TTNIDGGNYKVFRTGDTNPGLGIAVRFRAIGAGFSSDWTQLEGFGLVDGTVSAPLIGPIP
EEEECCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEECCCEEECCCCCCCEEECCC
YNDGIKFPLGMEMQIHYVKASEELRSGGVRIFDFAYLYHRRSIDGVPDNSGARYRIVQVP
CCCCCCCCCCCEEEEEEEECCHHHHHCCEEEEEEEEEHHHCCCCCCCCCCCCEEEEEEEC
ANSIDIQIMTQTCTTPDVVVNLPEVNSRQFTGIGTVKALKAFNLNFNHCPGGLDGINYKF
CCCEEEEEEEECCCCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCEEC
GATTSILDSANGVVALDANSTAEGVGVLLRSQSDAAIELDKEYTMSGYDTSSTQSYTVPM
CCCHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCEEEECCCEEECCCCCCCCCEEEEEH
QAGIYQIENTVTPGSVKGEFTFTLIYK
HCCEEEEECCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA