Click here to switch to the map view.

The map label for this gene is yicH [H]

Identifier: 218927254

GI number: 218927254

Start: 42465

End: 44174

Strand: Reverse

Name: yicH [H]

Synonym: YPO0033

Alternate gene names: 218927254

Gene position: 44174-42465 (Counterclockwise)

Preceding gene: 218927255

Following gene: 218927252

Centisome position: 0.95

GC content: 48.3

Gene sequence:

>1710_bases
ATGAAATTTCTCGGGAAAACGCTGCTAACGTTATTGCTGCTGTTTGCGCTGTCTATCGTGCTGTGCTACGCAGTGCTTCA
GACCAGTTGGGCCGCGGGCTGGCTTAGTCGTTGGGTCAGCAATAACAGTGGTTATCACCTCTCTCTAAGGGGGATCGATC
ATCGATGGTCCCAACCGGGGCAAATCAGTTTTAGTGATGTCACACTAGCACGTGCCGATCAGCCCCCGTTCCTAACCGCT
CAGCAGGTCATTTTTGGCCTGAGTTGGCGTCAACTGACTGATCCTAAGCATTTTCTCAGTCTGCAATTACAAAATGGTAG
CTTAACCCTCAATAACAGCACACCGTCACTCCCGTTGCAGGCTGATACCTTACAGTTAACCGACATGACGCTGAATACCA
CGGTTGAATCAAAAAACGCGACCAGCCAGTGGAAAATTGCAGGTCAGCATGTCAACGGGGGGCTAGTGCCTTGGCAACCA
ATACCAGGCAACAGCTTTGGGGAAAATACCCAATTCCATTTCAGTGCTGGCTTCCTGACGATTAATGACATATCAGCCCA
ACAGATTTATCTGCAAGGCTCAATACAGAAAGATATCCTGACCCTGACCAATTTCGGGGCCAATATCGCCCAAGGGGAAT
TGACCGGCAATGCCCGTCAGTCTGCTGATGGCAGTTGGCTGGTTGATCGCCTACGTCTGAGTAATATCCGCTTGCAAACA
ACGGCCAGCTTAGAAGATGTCTGGAATAATGTTTTACAGTTACCCCCTATCACCCTCAAACGGTTTGATTTGATTGATGC
GCGAGTTGAAGGAAAAGGCTGGGCTGTGAATGATGTTGATCTGACGCTAAAAAACATCACCTTTAAACAAGGGGATTGGC
AAAGTGATGATGGCGAACTGGTGTTCAATGCCAGTGATATTATTAAAGGTAATATTCATCTGATTGACCCAATCGCGACG
TTTACCTTGTCACCTGAGGGCGTGGCGATTAACCAATTCACTACCCGTTGGCAAGATGGTCTGTTGAGAACGCTGGGGAG
TTGGTCCCGTGCTACGCATCGGTTACAACTGGGTGAGTTGACTGTTGTGGCACTGGTTTACACTCTGCCGAACGATTGGA
AACAGCTGTGGCAACAAACATTGCCAGACTGGCTGTCTGAGGTGTATGTCGGTAAATTGAGTGCTAACCGTAACTTACTC
ATTGATATCAGCCCGGATTTTCCCTTCCAAATCACCTCATTAGATGCAGCAGGCAGCAACCTATTACTGGCCAAAAATCA
CCAATGGGGCGTATGGTCCGGGTCACTGGTGTTGAATGCCGGTAATGCAACATTTAATAAAAACGATATCCGACGCCCTT
CACTGGCGCTGAATGCCAATGAACAGCAGATCACGTTCAGTGATTTAAGTGCGTTTACTAAAGAGGGGTTGCTAGAAGCC
ACTGCCAGTATTGATCAAACCCCAGACAGAGCCTTATCACTCGCTCTGACAGGCCGTTCTGTTGACCTTAATTTTTTACA
CAACTGGGGATGGCCAGCATTACCGTTGCAAGGTCTGGGTAACTTGAAATTGCAGATAAAGGGCAATCTGACAGCCGACG
CACCATTGAAACCCACCCTTAACGGCTCTCTACAGGCAATAGACAGCAACGGGCAACAAATCAATCAAACGGTATTACAT
GGGGTCGTGCAGGGCACAGCAGAGCAATAA

Upstream 100 bases:

>100_bases
GCCATTTTTTTTATGGTCCGATAGCTGATTATCTATTGAGCTAATGGAAAAATTGCGGCATAAACAGTGTTCCTCATACT
GACAGACGTGGATTGGCCAG

Downstream 100 bases:

>100_bases
GGGCGGTTAATTAGGTAAATTCTGCTATCCAACGTCCTGCCTTGCAATAGCGGGCTGGCTAATAATACTCGGGTTCGTCA
TCGCCCGGCAGCAAATCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MKFLGKTLLTLLLLFALSIVLCYAVLQTSWAAGWLSRWVSNNSGYHLSLRGIDHRWSQPGQISFSDVTLARADQPPFLTA
QQVIFGLSWRQLTDPKHFLSLQLQNGSLTLNNSTPSLPLQADTLQLTDMTLNTTVESKNATSQWKIAGQHVNGGLVPWQP
IPGNSFGENTQFHFSAGFLTINDISAQQIYLQGSIQKDILTLTNFGANIAQGELTGNARQSADGSWLVDRLRLSNIRLQT
TASLEDVWNNVLQLPPITLKRFDLIDARVEGKGWAVNDVDLTLKNITFKQGDWQSDDGELVFNASDIIKGNIHLIDPIAT
FTLSPEGVAINQFTTRWQDGLLRTLGSWSRATHRLQLGELTVVALVYTLPNDWKQLWQQTLPDWLSEVYVGKLSANRNLL
IDISPDFPFQITSLDAAGSNLLLAKNHQWGVWSGSLVLNAGNATFNKNDIRRPSLALNANEQQITFSDLSAFTKEGLLEA
TASIDQTPDRALSLALTGRSVDLNFLHNWGWPALPLQGLGNLKLQIKGNLTADAPLKPTLNGSLQAIDSNGQQINQTVLH
GVVQGTAEQ

Sequences:

>Translated_569_residues
MKFLGKTLLTLLLLFALSIVLCYAVLQTSWAAGWLSRWVSNNSGYHLSLRGIDHRWSQPGQISFSDVTLARADQPPFLTA
QQVIFGLSWRQLTDPKHFLSLQLQNGSLTLNNSTPSLPLQADTLQLTDMTLNTTVESKNATSQWKIAGQHVNGGLVPWQP
IPGNSFGENTQFHFSAGFLTINDISAQQIYLQGSIQKDILTLTNFGANIAQGELTGNARQSADGSWLVDRLRLSNIRLQT
TASLEDVWNNVLQLPPITLKRFDLIDARVEGKGWAVNDVDLTLKNITFKQGDWQSDDGELVFNASDIIKGNIHLIDPIAT
FTLSPEGVAINQFTTRWQDGLLRTLGSWSRATHRLQLGELTVVALVYTLPNDWKQLWQQTLPDWLSEVYVGKLSANRNLL
IDISPDFPFQITSLDAAGSNLLLAKNHQWGVWSGSLVLNAGNATFNKNDIRRPSLALNANEQQITFSDLSAFTKEGLLEA
TASIDQTPDRALSLALTGRSVDLNFLHNWGWPALPLQGLGNLKLQIKGNLTADAPLKPTLNGSLQAIDSNGQQINQTVLH
GVVQGTAEQ
>Mature_569_residues
MKFLGKTLLTLLLLFALSIVLCYAVLQTSWAAGWLSRWVSNNSGYHLSLRGIDHRWSQPGQISFSDVTLARADQPPFLTA
QQVIFGLSWRQLTDPKHFLSLQLQNGSLTLNNSTPSLPLQADTLQLTDMTLNTTVESKNATSQWKIAGQHVNGGLVPWQP
IPGNSFGENTQFHFSAGFLTINDISAQQIYLQGSIQKDILTLTNFGANIAQGELTGNARQSADGSWLVDRLRLSNIRLQT
TASLEDVWNNVLQLPPITLKRFDLIDARVEGKGWAVNDVDLTLKNITFKQGDWQSDDGELVFNASDIIKGNIHLIDPIAT
FTLSPEGVAINQFTTRWQDGLLRTLGSWSRATHRLQLGELTVVALVYTLPNDWKQLWQQTLPDWLSEVYVGKLSANRNLL
IDISPDFPFQITSLDAAGSNLLLAKNHQWGVWSGSLVLNAGNATFNKNDIRRPSLALNANEQQITFSDLSAFTKEGLLEA
TASIDQTPDRALSLALTGRSVDLNFLHNWGWPALPLQGLGNLKLQIKGNLTADAPLKPTLNGSLQAIDSNGQQINQTVLH
GVVQGTAEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790088, Length=563, Percent_Identity=49.0230905861456, Blast_Score=567, Evalue=1e-163,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 62696; Mature: 62696

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLGKTLLTLLLLFALSIVLCYAVLQTSWAAGWLSRWVSNNSGYHLSLRGIDHRWSQPG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
QISFSDVTLARADQPPFLTAQQVIFGLSWRQLTDPKHFLSLQLQNGSLTLNNSTPSLPLQ
CEEECEEEEEECCCCCCCCHHHHHHCCCHHHCCCCCCEEEEEEECCEEEECCCCCCCCEE
ADTLQLTDMTLNTTVESKNATSQWKIAGQHVNGGLVPWQPIPGNSFGENTQFHFSAGFLT
ECEEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECEEE
INDISAQQIYLQGSIQKDILTLTNFGANIAQGELTGNARQSADGSWLVDRLRLSNIRLQT
EECCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEE
TASLEDVWNNVLQLPPITLKRFDLIDARVEGKGWAVNDVDLTLKNITFKQGDWQSDDGEL
CCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCEEECCEEEEEEEEEEECCCCCCCCCCE
VFNASDIIKGNIHLIDPIATFTLSPEGVAINQFTTRWQDGLLRTLGSWSRATHRLQLGEL
EEEHHHEEECCEEEECCEEEEEECCCCEEEHHHHHHHHHHHHHHHCCHHHHHHEEEECCE
TVVALVYTLPNDWKQLWQQTLPDWLSEVYVGKLSANRNLLIDISPDFPFQITSLDAAGSN
EEEEEEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCEEEEEECCCCCE
LLLAKNHQWGVWSGSLVLNAGNATFNKNDIRRPSLALNANEQQITFSDLSAFTKEGLLEA
EEEEECCCCCEEECEEEEECCCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHH
TASIDQTPDRALSLALTGRSVDLNFLHNWGWPALPLQGLGNLKLQIKGNLTADAPLKPTL
HHCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
NGSLQAIDSNGQQINQTVLHGVVQGTAEQ
CCCEEEECCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKFLGKTLLTLLLLFALSIVLCYAVLQTSWAAGWLSRWVSNNSGYHLSLRGIDHRWSQPG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
QISFSDVTLARADQPPFLTAQQVIFGLSWRQLTDPKHFLSLQLQNGSLTLNNSTPSLPLQ
CEEECEEEEEECCCCCCCCHHHHHHCCCHHHCCCCCCEEEEEEECCEEEECCCCCCCCEE
ADTLQLTDMTLNTTVESKNATSQWKIAGQHVNGGLVPWQPIPGNSFGENTQFHFSAGFLT
ECEEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECEEE
INDISAQQIYLQGSIQKDILTLTNFGANIAQGELTGNARQSADGSWLVDRLRLSNIRLQT
EECCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEE
TASLEDVWNNVLQLPPITLKRFDLIDARVEGKGWAVNDVDLTLKNITFKQGDWQSDDGEL
CCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCEEECCEEEEEEEEEEECCCCCCCCCCE
VFNASDIIKGNIHLIDPIATFTLSPEGVAINQFTTRWQDGLLRTLGSWSRATHRLQLGEL
EEEHHHEEECCEEEECCEEEEEECCCCEEEHHHHHHHHHHHHHHHCCHHHHHHEEEECCE
TVVALVYTLPNDWKQLWQQTLPDWLSEVYVGKLSANRNLLIDISPDFPFQITSLDAAGSN
EEEEEEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCEEEEEECCCCCE
LLLAKNHQWGVWSGSLVLNAGNATFNKNDIRRPSLALNANEQQITFSDLSAFTKEGLLEA
EEEEECCCCCEEECEEEEECCCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHH
TASIDQTPDRALSLALTGRSVDLNFLHNWGWPALPLQGLGNLKLQIKGNLTADAPLKPTL
HHCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
NGSLQAIDSNGQQINQTVLHGVVQGTAEQ
CCCEEEECCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]