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The map label for this gene is nuoL [H]

Identifier: 218906469

GI number: 218906469

Start: 5085178

End: 5087040

Strand: Reverse

Name: nuoL [H]

Synonym: BCAH820_5383

Alternate gene names: 218906469

Gene position: 5087040-5085178 (Counterclockwise)

Preceding gene: 218906470

Following gene: 218906468

Centisome position: 95.93

GC content: 41.98

Gene sequence:

>1863_bases
ATGATCGATTATGTATGGCTCATACCGCTTTTCCCGCTTGTTTCGTTTTTGTTATTACTTATATTCGGGAAGAAAATTAG
AGAAGGAAGCAGTGTACTTAGTATTTTCTTCGTCTTTCTCTCCTTTATATGTGCGGTACTTGTATTAATAGAAAGACTTT
CGACAGTACCAGTGAAGCATAAGTGGGTATGGCTTAGAACTGGAGATATTGATATATCGTTTGGCTTTGAAGTGACAGCA
TTAGGGGCTTTAATGTTGTTTATCGTTACACTTGTGAGTTTACTTGTACATGTGTATTCGAAAGGTTATATGAAAGGTGA
GGAAAGATTACCAACCTTTTATGCCTATTTAGGGTTCTTTACATTTGCGATGCTCGGGCTCGTTATATCACCAAATTTAT
TGCAGCTTTATATATTTTGGGAGTTAGTTGGCCTTGGCTCATTTTTACTCATCGGTTTTTATTTCTTTAAAGAAGAAGCG
AGGGCTGCCGCGAAGAAGGCTTTTATTATGACACGTATTGGAGATGTCGGTTTATTTATTGGGATGATCTTAATTTTCTG
GCATGCAGGTAGTTTTGAATATGACGCAATATTTAGGGCGATTCATACGGGTGATCTTACCCCTACGATGATTACAATAA
CGGCGATATTAATTTTTATCGGGGCGATGGGAAAATCAGGTCAGTTCCCCCTTCATACGTGGTTACCGGATGCGATGGAA
GGGCCGACGCCTGTTTCGGCACTCATTCATGCGGCGACGATGGTCGCAGCTGGCGTATATTTAGTGGCAACGATGTTTCC
GCTATTTTCAGCAAGTGCGGTGGCGATGCAAACGGTGGCAATCGTTGGAGCTTTCACCGCGATCTTTGCGGCTTCCATCG
GTCTTGTGCAAACGGATATAAAGAGAGTGCTTGCTTATTCTACAGTTAGTCAGCTTGGGTATATGATGCTTGCATTAGGA
TCTGCCGGTTATGTAGCTGGTGTGTTCCATTTAACGACACACGCCTTTTTTAAAGCGTTGCTATTTTTGGCGGCAGGAAG
TGTCATTCATGCCGTGCATACGCAAAACATTAATAAAATGGGCGGCTTACAGAAGAAGATGAAAGTAACTGCTGCGCTAT
TTTTAATCGGTACCCTTGCAATAAGTGGTGTGCCGCTCCTTTCCGGTTTCTTTAGTAAAGATGAAATTTTAGCGGCGACT
TGGATGAACGGCAATTACGTTTTATTCATATTAGCAGTAATTGCAGCATTCCTAACAGCGTTCTACATGTTCCGCTTATA
CTTTCTCGTCTTTACGGGGGAAGCGAAGACGAAGGAAGATGTGCATGAATCGCCTCGCATCATGACATATCCGATGATTG
TCCTTGGCGTCCTTGCAGTCGTGGCAGGTTATATAAATACACCGTGGTTTGGAACGTTTCTCGGAGATTGGCTTACGAAA
GATGTAGCATTTAAAGTGCAAGAAGCACACGGCCCAGTTTGGATTATGATTGTTGCGACGCTCGTTTCTTTGGTTGGGAT
TGCTCTTGCATATTTCATATATGGCAAGAAATCTATTGCTAGAGATTGGGCTGGTGGCGAGGAAGAACCTCTGTATAAAA
TTTTGAAAGAAAAATATTATGTGGATGAACTATACAATATGACGGTCATTCCTATTACGAAAGGAATCGCTCATGTGCTT
CGCTTATTTGAGGTGTATGTAGTCGAAGGAATTGCTATTTTAATAGGGAGTTTAGTTAAAGGGATGAGCGGAGTCGGCTC
TAGACTCCAAAACGGAAATGTACAAGTGTACGGGACTGTAACAGCTGTTTCACTTGCGGTACTCTTCATTATTTTGCTCT
ATACGGGAGGGGATTTACGATGA

Upstream 100 bases:

>100_bases
CCATTTTAATTGCTTTATATCGTAACCGTACGACAGTTCATGTAGATGAAATGGATACGCTCAAAGGATAGCATTGTGAC
CGAAAAGGGGGAAGGAAACA

Downstream 100 bases:

>100_bases
ATGATTTGTTATTAACGTTCTTCATTTTTTCCCCGCTTTTAGGAATTCTCTTACTTGCATTAACACCGAAAAAAGAATCG
CGTACAGTGCGAGCGCTCGG

Product: NADH dehydrogenase subunit L

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I, chain 5; NDH-1, chain 5 [H]

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MIDYVWLIPLFPLVSFLLLLIFGKKIREGSSVLSIFFVFLSFICAVLVLIERLSTVPVKHKWVWLRTGDIDISFGFEVTA
LGALMLFIVTLVSLLVHVYSKGYMKGEERLPTFYAYLGFFTFAMLGLVISPNLLQLYIFWELVGLGSFLLIGFYFFKEEA
RAAAKKAFIMTRIGDVGLFIGMILIFWHAGSFEYDAIFRAIHTGDLTPTMITITAILIFIGAMGKSGQFPLHTWLPDAME
GPTPVSALIHAATMVAAGVYLVATMFPLFSASAVAMQTVAIVGAFTAIFAASIGLVQTDIKRVLAYSTVSQLGYMMLALG
SAGYVAGVFHLTTHAFFKALLFLAAGSVIHAVHTQNINKMGGLQKKMKVTAALFLIGTLAISGVPLLSGFFSKDEILAAT
WMNGNYVLFILAVIAAFLTAFYMFRLYFLVFTGEAKTKEDVHESPRIMTYPMIVLGVLAVVAGYINTPWFGTFLGDWLTK
DVAFKVQEAHGPVWIMIVATLVSLVGIALAYFIYGKKSIARDWAGGEEEPLYKILKEKYYVDELYNMTVIPITKGIAHVL
RLFEVYVVEGIAILIGSLVKGMSGVGSRLQNGNVQVYGTVTAVSLAVLFIILLYTGGDLR

Sequences:

>Translated_620_residues
MIDYVWLIPLFPLVSFLLLLIFGKKIREGSSVLSIFFVFLSFICAVLVLIERLSTVPVKHKWVWLRTGDIDISFGFEVTA
LGALMLFIVTLVSLLVHVYSKGYMKGEERLPTFYAYLGFFTFAMLGLVISPNLLQLYIFWELVGLGSFLLIGFYFFKEEA
RAAAKKAFIMTRIGDVGLFIGMILIFWHAGSFEYDAIFRAIHTGDLTPTMITITAILIFIGAMGKSGQFPLHTWLPDAME
GPTPVSALIHAATMVAAGVYLVATMFPLFSASAVAMQTVAIVGAFTAIFAASIGLVQTDIKRVLAYSTVSQLGYMMLALG
SAGYVAGVFHLTTHAFFKALLFLAAGSVIHAVHTQNINKMGGLQKKMKVTAALFLIGTLAISGVPLLSGFFSKDEILAAT
WMNGNYVLFILAVIAAFLTAFYMFRLYFLVFTGEAKTKEDVHESPRIMTYPMIVLGVLAVVAGYINTPWFGTFLGDWLTK
DVAFKVQEAHGPVWIMIVATLVSLVGIALAYFIYGKKSIARDWAGGEEEPLYKILKEKYYVDELYNMTVIPITKGIAHVL
RLFEVYVVEGIAILIGSLVKGMSGVGSRLQNGNVQVYGTVTAVSLAVLFIILLYTGGDLR
>Mature_620_residues
MIDYVWLIPLFPLVSFLLLLIFGKKIREGSSVLSIFFVFLSFICAVLVLIERLSTVPVKHKWVWLRTGDIDISFGFEVTA
LGALMLFIVTLVSLLVHVYSKGYMKGEERLPTFYAYLGFFTFAMLGLVISPNLLQLYIFWELVGLGSFLLIGFYFFKEEA
RAAAKKAFIMTRIGDVGLFIGMILIFWHAGSFEYDAIFRAIHTGDLTPTMITITAILIFIGAMGKSGQFPLHTWLPDAME
GPTPVSALIHAATMVAAGVYLVATMFPLFSASAVAMQTVAIVGAFTAIFAASIGLVQTDIKRVLAYSTVSQLGYMMLALG
SAGYVAGVFHLTTHAFFKALLFLAAGSVIHAVHTQNINKMGGLQKKMKVTAALFLIGTLAISGVPLLSGFFSKDEILAAT
WMNGNYVLFILAVIAAFLTAFYMFRLYFLVFTGEAKTKEDVHESPRIMTYPMIVLGVLAVVAGYINTPWFGTFLGDWLTK
DVAFKVQEAHGPVWIMIVATLVSLVGIALAYFIYGKKSIARDWAGGEEEPLYKILKEKYYVDELYNMTVIPITKGIAHVL
RLFEVYVVEGIAILIGSLVKGMSGVGSRLQNGNVQVYGTVTAVSLAVLFIILLYTGGDLR

Specific function: NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton tran

COG id: COG1009

COG function: function code CP; NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 5 family [H]

Homologues:

Organism=Homo sapiens, GI251831117, Length=409, Percent_Identity=37.1638141809291, Blast_Score=262, Evalue=6e-70,
Organism=Escherichia coli, GI1788614, Length=569, Percent_Identity=40.4217926186292, Blast_Score=350, Evalue=2e-97,
Organism=Escherichia coli, GI1788829, Length=425, Percent_Identity=33.6470588235294, Blast_Score=182, Evalue=4e-47,
Organism=Escherichia coli, GI1788827, Length=422, Percent_Identity=31.042654028436, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1788831, Length=414, Percent_Identity=31.1594202898551, Blast_Score=143, Evalue=3e-35,
Organism=Escherichia coli, GI2367154, Length=430, Percent_Identity=25.1162790697674, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1788613, Length=395, Percent_Identity=26.5822784810127, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI145693160, Length=351, Percent_Identity=25.3561253561254, Blast_Score=89, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001750
- InterPro:   IPR001516
- InterPro:   IPR002128
- InterPro:   IPR003945
- InterPro:   IPR018393 [H]

Pfam domain/function: PF00361 Oxidored_q1; PF01010 Oxidored_q1_C; PF00662 Oxidored_q1_N [H]

EC number: 1.6.5.3

Molecular weight: Translated: 68122; Mature: 68122

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDYVWLIPLFPLVSFLLLLIFGKKIREGSSVLSIFFVFLSFICAVLVLIERLSTVPVKH
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
KWVWLRTGDIDISFGFEVTALGALMLFIVTLVSLLVHVYSKGYMKGEERLPTFYAYLGFF
EEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHH
TFAMLGLVISPNLLQLYIFWELVGLGSFLLIGFYFFKEEARAAAKKAFIMTRIGDVGLFI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMILIFWHAGSFEYDAIFRAIHTGDLTPTMITITAILIFIGAMGKSGQFPLHTWLPDAME
HHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCC
GPTPVSALIHAATMVAAGVYLVATMFPLFSASAVAMQTVAIVGAFTAIFAASIGLVQTDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRVLAYSTVSQLGYMMLALGSAGYVAGVFHLTTHAFFKALLFLAAGSVIHAVHTQNINKM
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHH
GGLQKKMKVTAALFLIGTLAISGVPLLSGFFSKDEILAATWMNGNYVLFILAVIAAFLTA
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
FYMFRLYFLVFTGEAKTKEDVHESPRIMTYPMIVLGVLAVVAGYINTPWFGTFLGDWLTK
HHHHHHHHHHHCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DVAFKVQEAHGPVWIMIVATLVSLVGIALAYFIYGKKSIARDWAGGEEEPLYKILKEKYY
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHH
VDELYNMTVIPITKGIAHVLRLFEVYVVEGIAILIGSLVKGMSGVGSRLQNGNVQVYGTV
HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
TAVSLAVLFIILLYTGGDLR
HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIDYVWLIPLFPLVSFLLLLIFGKKIREGSSVLSIFFVFLSFICAVLVLIERLSTVPVKH
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
KWVWLRTGDIDISFGFEVTALGALMLFIVTLVSLLVHVYSKGYMKGEERLPTFYAYLGFF
EEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHH
TFAMLGLVISPNLLQLYIFWELVGLGSFLLIGFYFFKEEARAAAKKAFIMTRIGDVGLFI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMILIFWHAGSFEYDAIFRAIHTGDLTPTMITITAILIFIGAMGKSGQFPLHTWLPDAME
HHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCC
GPTPVSALIHAATMVAAGVYLVATMFPLFSASAVAMQTVAIVGAFTAIFAASIGLVQTDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRVLAYSTVSQLGYMMLALGSAGYVAGVFHLTTHAFFKALLFLAAGSVIHAVHTQNINKM
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHH
GGLQKKMKVTAALFLIGTLAISGVPLLSGFFSKDEILAATWMNGNYVLFILAVIAAFLTA
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
FYMFRLYFLVFTGEAKTKEDVHESPRIMTYPMIVLGVLAVVAGYINTPWFGTFLGDWLTK
HHHHHHHHHHHCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DVAFKVQEAHGPVWIMIVATLVSLVGIALAYFIYGKKSIARDWAGGEEEPLYKILKEKYY
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHH
VDELYNMTVIPITKGIAHVLRLFEVYVVEGIAILIGSLVKGMSGVGSRLQNGNVQVYGTV
HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
TAVSLAVLFIILLYTGGDLR
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8501038; 1554697 [H]