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The map label for this gene is spoIID [H]

Identifier: 218906463

GI number: 218906463

Start: 5078227

End: 5079246

Strand: Reverse

Name: spoIID [H]

Synonym: BCAH820_5377

Alternate gene names: 218906463

Gene position: 5079246-5078227 (Counterclockwise)

Preceding gene: 218906464

Following gene: 218906462

Centisome position: 95.79

GC content: 42.25

Gene sequence:

>1020_bases
ATGAAATTTTCAAAGCCATTTTTTATCACGGTAGTGCTTCTCATAGCGCTCGTTATCATTGTACCTGCTGCTCTTGTTAT
TCCGTTTGCGAAAGCAAAAGTAGGGGAAAAAGCAGCTTCTAAAACTCCTCCAGCGATAGAAAGTATACCAGCTCCAGGAA
AAGTGGATACAGCGGTTCAGGTTGCTGTATATCGCGAGAAACAAAAGAAGGTAGAATCATTACCTATGGAGGAGTATGTG
ACCGGTGTAGTAGCTTCTGAGATGAATGCCAGTTTTGAAATAGAGGCGCTAAAGGCGCAGGCATTAGCAGCGAGAACATT
TGTAGTCCAGCGTATGCTAAGCGGAGGTAAGAAAAACAATGCGGACGTGACAGATACGGTGAAAGATCAAGTGTACAAAA
GTAAAGAAGAATTGAAAAAACAATGGGGCAATAACTACGAAAATAATTTGAAGAAAATTGAGGAAGCTGTTTCGAAAACC
GCAGGACAAGTTTTAACGTATGAGGGAAACCCAATCTCAGCATCCTTCTTCTCAACGAGTAATGGCCGGACAGAAAATGC
GGCTGATTATTGGGGAAATGATTATCCGTATTTAAAGAGTGTAGATAGCCCATGGGATCAAGCTTCTCCGAAATTTACGA
GCGAGCAAACCTTTACCGTAGCTGACTTTCAAAAACGTCTCGGTGTGAAGGTACTGGCAGACGGGAAGGTTGGAAATATT
AAAGATCTTACGGAAGGAAAGCGAGTAAAAGACGTAGCATTTCAAGGGAAAACATTAACAGGAAAAGAAGTTCGCGAAAA
GTTAGATTTACGCTCCTCTGACTTCAAGTGGAAACAAGAGGGAGATAAAATCATTGTTACGACGAAAGGCTTCGGCCACG
GCGTTGGCATGAGCCAATACGGAGCGAACGGCATGGCAGCAGAAGGCAAGAAATATACAGATATCGTCGCTCATTACTAT
AAAGGTGTTGAAATAAAGACGATGAACGATTATGAAGGTAAGTTGATGGTGAAGAAGTAG

Upstream 100 bases:

>100_bases
AGTTTCACTTTATACTGTTCCCCCTGAAGTATGTTCTAAAAGAAAGAGTTGTTCCATAAKAATGAATGGAGTAAAGCTTT
TTTATATTGGGGGAAATAAG

Downstream 100 bases:

>100_bases
AGTAAAAGGGACCGTCCTAAGAGGTATGTTGGGACGGTCCTTCTTTTTTTATAATGCTTCATAAAATATCTAAATTTTCC
ATTAATTGTTTGGTATAATA

Product: stage II sporulation protein D

Products: NA

Alternate protein names: Stage II sporulation protein C [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MKFSKPFFITVVLLIALVIIVPAALVIPFAKAKVGEKAASKTPPAIESIPAPGKVDTAVQVAVYREKQKKVESLPMEEYV
TGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTVKDQVYKSKEELKKQWGNNYENNLKKIEEAVSKT
AGQVLTYEGNPISASFFSTSNGRTENAADYWGNDYPYLKSVDSPWDQASPKFTSEQTFTVADFQKRLGVKVLADGKVGNI
KDLTEGKRVKDVAFQGKTLTGKEVREKLDLRSSDFKWKQEGDKIIVTTKGFGHGVGMSQYGANGMAAEGKKYTDIVAHYY
KGVEIKTMNDYEGKLMVKK

Sequences:

>Translated_339_residues
MKFSKPFFITVVLLIALVIIVPAALVIPFAKAKVGEKAASKTPPAIESIPAPGKVDTAVQVAVYREKQKKVESLPMEEYV
TGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTVKDQVYKSKEELKKQWGNNYENNLKKIEEAVSKT
AGQVLTYEGNPISASFFSTSNGRTENAADYWGNDYPYLKSVDSPWDQASPKFTSEQTFTVADFQKRLGVKVLADGKVGNI
KDLTEGKRVKDVAFQGKTLTGKEVREKLDLRSSDFKWKQEGDKIIVTTKGFGHGVGMSQYGANGMAAEGKKYTDIVAHYY
KGVEIKTMNDYEGKLMVKK
>Mature_339_residues
MKFSKPFFITVVLLIALVIIVPAALVIPFAKAKVGEKAASKTPPAIESIPAPGKVDTAVQVAVYREKQKKVESLPMEEYV
TGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTVKDQVYKSKEELKKQWGNNYENNLKKIEEAVSKT
AGQVLTYEGNPISASFFSTSNGRTENAADYWGNDYPYLKSVDSPWDQASPKFTSEQTFTVADFQKRLGVKVLADGKVGNI
KDLTEGKRVKDVAFQGKTLTGKEVREKLDLRSSDFKWKQEGDKIIVTTKGFGHGVGMSQYGANGMAAEGKKYTDIVAHYY
KGVEIKTMNDYEGKLMVKK

Specific function: May act at the level of sigma-G activity or its stability. SpoIID is probably required for engulfment [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693
- InterPro:   IPR014225 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 37354; Mature: 37354

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSKPFFITVVLLIALVIIVPAALVIPFAKAKVGEKAASKTPPAIESIPAPGKVDTAVQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHCCCCCCCCCHHHH
VAVYREKQKKVESLPMEEYVTGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNN
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCC
ADVTDTVKDQVYKSKEELKKQWGNNYENNLKKIEEAVSKTAGQVLTYEGNPISASFFSTS
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECC
NGRTENAADYWGNDYPYLKSVDSPWDQASPKFTSEQTFTVADFQKRLGVKVLADGKVGNI
CCCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHCCEEEEECCCCCCC
KDLTEGKRVKDVAFQGKTLTGKEVREKLDLRSSDFKWKQEGDKIIVTTKGFGHGVGMSQY
HHHHCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHCCCCEEEEEECCCCCCCCHHHC
GANGMAAEGKKYTDIVAHYYKGVEIKTMNDYEGKLMVKK
CCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEC
>Mature Secondary Structure
MKFSKPFFITVVLLIALVIIVPAALVIPFAKAKVGEKAASKTPPAIESIPAPGKVDTAVQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHCCCCCCCCCHHHH
VAVYREKQKKVESLPMEEYVTGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNN
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCC
ADVTDTVKDQVYKSKEELKKQWGNNYENNLKKIEEAVSKTAGQVLTYEGNPISASFFSTS
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECC
NGRTENAADYWGNDYPYLKSVDSPWDQASPKFTSEQTFTVADFQKRLGVKVLADGKVGNI
CCCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHCCEEEEECCCCCCC
KDLTEGKRVKDVAFQGKTLTGKEVREKLDLRSSDFKWKQEGDKIIVTTKGFGHGVGMSQY
HHHHCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHCCCCEEEEEECCCCCCCCHHHC
GANGMAAEGKKYTDIVAHYYKGVEIKTMNDYEGKLMVKK
CCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3011962; 9384377 [H]