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The map label for this gene is ydaJ [H]

Identifier: 218906397

GI number: 218906397

Start: 5005149

End: 5006234

Strand: Reverse

Name: ydaJ [H]

Synonym: BCAH820_5311

Alternate gene names: 218906397

Gene position: 5006234-5005149 (Counterclockwise)

Preceding gene: 218906398

Following gene: 218906395

Centisome position: 94.41

GC content: 35.73

Gene sequence:

>1086_bases
TTGCGGAAACGTATATATATAGTGATTGGAGTTATTCTTTTAATCGCTTTAGGTGGAATTGTATTTTGGTCAGCTTTGCA
AGGAAACCGTACGGAGCATTTTATTTTAAGACATATGATGAATGAAAATGGGACGCTTGCTACATATCGTTTAGAAGATA
CAAAAGCAGGTACCGGTGAAGCGAAAGGCCGTGAAGCTTTATCGGAATCAGCAGGACTTTGGCTACAATATACATTGGAT
AAAGATGATCAAGCGTTATTCGATGAACAAGTTAAGGTTATTCAAAATAACTTTGTACATAAGGACCAAATTGTTTTATG
GAAAATCTCTGAAAAGGGAGAAATGCAATCAGCTACAAATGCACTTATTGACGATCTTCGTATTATAGAACAGTTATATC
GCGCTTATGAAATGTACAAGGAAGAGCGTTATAAAAACTTGGCAGATCAATTGAGTGATGCTGTAATTCGTTATAATAAG
AAGGATAATTATTATGTTGATTATTATGATGCAGATGCAAGGAAACAAAATGATTTTGCAACAACGTCATATATAAATCC
GCGCGCGTTCTCTTATATGAAAAAGTATGGTAAAGTTTCTGCTCAGCAATATCAGGAAGTCGTTCAATTTTTAGCGGATT
ACCCAAGGCATGGATGGGCATTCCCGAAAGAGTATAAAGAGGATGGTACATTTACGTACGATAAAGAAGTGAATCTTATT
GACCAATCATACGTTGCATATCATCGTAGTTTAGGTGGCCTTTCATCAGATGCTTATTTGGAATTTATAAAGAAGAAGTT
CCAGGAGGATGGAAAGTTATACGGTCGTTACAATTTAGAAACGGGAAAACAAACTGTGAAGTATGAATCGCCAGCCGCTT
ACGGATTAACAATTTTGTACGTACTACAAACAGGCGATACAAAGTTTGCAAAGGAATTGTATGACCATATGTCCACATTC
CGAAATGACAACGTATTTAGTAGATATTACGGTGGATACGTAACAGGTGAAAATAATAATACGCATATTTTCGATAACGT
ACTACCGCTTTTAGCTGAAATAGAATTAGAGAAAAGTGAACAATAG

Upstream 100 bases:

>100_bases
GAGGGATAGAGGAATGGAAGACAATCTAATAGATTGTCTTTTTTACATTTACGTATGTTCTGGTAAAATTAAGGATAGCC
TTACTAGGGAGGTGAAAAGT

Downstream 100 bases:

>100_bases
AAGGTGCCATCCTATCGGGATGGCATCTTTTATTTATTGATATCATTTTACGCCCTAATATTGGAGAAGTAATCGATCAC
GAATTCACGGAATTGCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MRKRIYIVIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGTLATYRLEDTKAGTGEAKGREALSESAGLWLQYTLD
KDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEMQSATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIRYNK
KDNYYVDYYDADARKQNDFATTSYINPRAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLI
DQSYVAYHRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAKELYDHMSTF
RNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELEKSEQ

Sequences:

>Translated_361_residues
MRKRIYIVIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGTLATYRLEDTKAGTGEAKGREALSESAGLWLQYTLD
KDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEMQSATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIRYNK
KDNYYVDYYDADARKQNDFATTSYINPRAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLI
DQSYVAYHRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAKELYDHMSTF
RNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELEKSEQ
>Mature_361_residues
MRKRIYIVIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGTLATYRLEDTKAGTGEAKGREALSESAGLWLQYTLD
KDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEMQSATNALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIRYNK
KDNYYVDYYDADARKQNDFATTSYINPRAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLI
DQSYVAYHRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLTILYVLQTGDTKFAKELYDHMSTF
RNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELEKSEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42046; Mature: 42046

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRIYIVIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGTLATYRLEDTKAGTGE
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
AKGREALSESAGLWLQYTLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEMQSATN
CHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHH
ALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVDYYDADARKQNDFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCC
TTSYINPRAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLI
EECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEECCCCCHH
DQSYVAYHRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLTILY
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCHHCEEEEE
VLQTGDTKFAKELYDHMSTFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELEKSE
EEECCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEECCCCCCEEHHHHHHHHHHHHHCCCC
Q
C
>Mature Secondary Structure
MRKRIYIVIGVILLIALGGIVFWSALQGNRTEHFILRHMMNENGTLATYRLEDTKAGTGE
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
AKGREALSESAGLWLQYTLDKDDQALFDEQVKVIQNNFVHKDQIVLWKISEKGEMQSATN
CHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHH
ALIDDLRIIEQLYRAYEMYKEERYKNLADQLSDAVIRYNKKDNYYVDYYDADARKQNDFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCC
TTSYINPRAFSYMKKYGKVSAQQYQEVVQFLADYPRHGWAFPKEYKEDGTFTYDKEVNLI
EECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEECCCCCHH
DQSYVAYHRSLGGLSSDAYLEFIKKKFQEDGKLYGRYNLETGKQTVKYESPAAYGLTILY
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCHHCEEEEE
VLQTGDTKFAKELYDHMSTFRNDNVFSRYYGGYVTGENNNTHIFDNVLPLLAEIELEKSE
EEECCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEECCCCCCEEHHHHHHHHHHHHHCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]