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The map label for this gene is spoVS2 [H]

Identifier: 218904904

GI number: 218904904

Start: 3621776

End: 3622036

Strand: Reverse

Name: spoVS2 [H]

Synonym: BCAH820_3788

Alternate gene names: 218904904

Gene position: 3622036-3621776 (Counterclockwise)

Preceding gene: 218904905

Following gene: 218904903

Centisome position: 68.31

GC content: 42.91

Gene sequence:

>261_bases
ATGGAAATATTAAAAGTTAAAGCAACGTCGGTCCCTAATTCTGTAGCTGGTGCACTTGCAGGTGTTATTCGCGAACGCGG
AACAGCAGAAATTCAAGCCATTGGTGCAGGTGCATTGAACCAAGCGGTAAAGGCAGTAGCAATTGCAAGAGGATTTGTAG
CGCCTAGTGGTTTGGACCTGATTTGTATCCCAGCGTTTACGGATATTATGATTGATGGGGAAGAACGTACAGCAATAAAA
TTAATTGTAGAACCTCGTTAA

Upstream 100 bases:

>100_bases
ATTACAGAAATTTAGCAGGAATACGTGTCATTCCTCGTGAATATAAGTTAAAGTGAAATAATTGCTAATACTTTTTATAG
AAACGAGGAGGAAACGCGGA

Downstream 100 bases:

>100_bases
GTTTTAAACAACCTGTTTGCAGTATGCAAACAGGTTGTTTTTATAATGGAGGAATGAAAATGAAAATTTTTGATGCTCAT
TGTGATGTGCTTCTTCAGTT

Product: stage V sporulation protein S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MEILKVKATSVPNSVAGALAGVIRERGTAEIQAIGAGALNQAVKAVAIARGFVAPSGLDLICIPAFTDIMIDGEERTAIK
LIVEPR

Sequences:

>Translated_86_residues
MEILKVKATSVPNSVAGALAGVIRERGTAEIQAIGAGALNQAVKAVAIARGFVAPSGLDLICIPAFTDIMIDGEERTAIK
LIVEPR
>Mature_86_residues
MEILKVKATSVPNSVAGALAGVIRERGTAEIQAIGAGALNQAVKAVAIARGFVAPSGLDLICIPAFTDIMIDGEERTAIK
LIVEPR

Specific function: Induced early in sporulation under the control of sigma- H. Interferes with sporulation at an early stage. Seems to play a positive role in allowing cells to progress beyond stage V of sporulation [H]

COG id: COG2359

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007347
- ProDom:   PD061837 [H]

Pfam domain/function: PF04232 SpoVS [H]

EC number: NA

Molecular weight: Translated: 8870; Mature: 8870

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILKVKATSVPNSVAGALAGVIRERGTAEIQAIGAGALNQAVKAVAIARGFVAPSGLDL
CCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCE
ICIPAFTDIMIDGEERTAIKLIVEPR
EEECCCEEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MEILKVKATSVPNSVAGALAGVIRERGTAEIQAIGAGALNQAVKAVAIARGFVAPSGLDL
CCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCE
ICIPAFTDIMIDGEERTAIKLIVEPR
EEECCCEEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559352; 9384377 [H]